RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TRAIPQ9BWF2 469 aa7.37□□□□□ -1.23
CDC42BPA-212ENST00000478573 DNAJC25Q9H1X3 360 aa7.37□□□□□ -1.23
CDC42BPA-212ENST00000478573 TRAK1Q9UPV9 953 aa7.37□□□□□ -1.23
CDC42BPA-212ENST00000478573 LIG1P18858 919 aa7.36□□□□□ -1.23
CDC42BPA-212ENST00000478573 TXKP42681 527 aa7.36□□□□□ -1.23
CDC42BPA-212ENST00000478573 CCER1Q8TC90 406 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-212ENST00000478573 EPS8L3Q8TE67 593 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-212ENST00000478573 DMRTB1Q96MA1 342 aa7.36□□□□□ -1.23
CDC42BPA-212ENST00000478573 CSRNP1Q96S65 589 aa7.36□□□□□ -1.23
CDC42BPA-212ENST00000478573 ACSS3Q9H6R3 686 aa7.36□□□□□ -1.23
CDC42BPA-212ENST00000478573 BSDC1Q9NW68 430 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-212ENST00000478573 ADGRE2Q9UHX3 823 aa7.36□□□□□ -1.23
CDC42BPA-212ENST00000478573 PPP1R9AQ9ULJ8 1098 aa7.36□□□□□ -1.23
CDC42BPA-212ENST00000478573 DYNC1LI2O43237 492 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 FCGRTP55899 365 aa7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 CYP27A1Q02318 531 aa7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 PTPN12Q05209 780 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 FAAP100Q0VG06 881 aa7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 GRM2Q14416 872 aa7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 PRPF40BQ6NWY9 871 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 DTHD1Q6ZMT9 781 aa7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 FLCNQ8NFG4 579 aa7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 FBXL18Q96ME1 805 aa7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 PIDD1Q9HB75 910 aa7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 GPN3Q9UHW5 284 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-212ENST00000478573 WDR89Q96FK6 387 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-212ENST00000478573 CCDC86Q9H6F5 360 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-212ENST00000478573 NLRP2Q9NX02 1062 aa7.34□□□□□ -1.23
CDC42BPA-212ENST00000478573 BIN2Q9UBW5 565 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-212ENST00000478573 ZC3H7BQ9UGR2 993 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-212ENST00000478573 TMPRSS2O15393 492 aa7.33□□□□□ -1.24
CDC42BPA-212ENST00000478573 IGHA2P01877 340 aa7.33□□□□□ -1.24
CDC42BPA-212ENST00000478573 PRNPP04156 253 aa7.33□□□□□ -1.24
CDC42BPA-212ENST00000478573 PDE4CQ08493 712 aa7.33□□□□□ -1.24
CDC42BPA-212ENST00000478573 RPS26P11Q5JNZ5 115 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-212ENST00000478573 PI16Q6UXB8 463 aa7.33□□□□□ -1.24
CDC42BPA-212ENST00000478573 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
CDC42BPA-212ENST00000478573 FMNL2Q96PY5 1086 aa7.33□□□□□ -1.24
CDC42BPA-212ENST00000478573 GLIS3Q8NEA6 775 aa7.32□□□□□ -1.24
CDC42BPA-212ENST00000478573 KCNB2Q92953 911 aa7.32□□□□□ -1.24
CDC42BPA-212ENST00000478573 GSX1Q9H4S2 264 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-212ENST00000478573 C1GALT1Q9NS00 363 aa7.32□□□□□ -1.24
CDC42BPA-212ENST00000478573 SOWAHDA6NJG2 315 aa7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 RNGTTO60942 597 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 GSTP1P09211 210 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 SLFN14P0C7P3 912 aa7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 HNRNPUQ00839 825 aaKnown RBP eCLIP7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 ID3Q02535 119 aa7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 PPP2R3AQ06190 1150 aa7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 TRIM26Q12899 539 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 CDK5R2Q13319 367 aa7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 SEZ6L2Q6UXD5 910 aa7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 NFXL1Q6ZNB6 911 aa7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 ALKBH8Q96BT7 664 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 RBCK1Q9BYM8 510 aa7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 ATXN3LQ9H3M9 355 aa7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 PPP4R2Q9NY27 417 aa7.31□□□□□ -1.24
CDC42BPA-212ENST00000478573 FAM87AP0C7U9 286 aa7.3□□□□□ -1.24
CDC42BPA-212ENST00000478573 OGFOD3Q6PK18 319 aa7.3□□□□□ -1.24
CDC42BPA-212ENST00000478573 TMC7Q7Z402 723 aa7.3□□□□□ -1.24
CDC42BPA-212ENST00000478573 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
CDC42BPA-212ENST00000478573 CRIM1Q9NZV1 1036 aa7.3□□□□□ -1.24
CDC42BPA-212ENST00000478573 AKAP2Q9Y2D5 859 aa7.3□□□□□ -1.24
CDC42BPA-212ENST00000478573 ZNF862O60290 1169 aa7.29□□□□□ -1.24
CDC42BPA-212ENST00000478573 HCLS1P14317 486 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-212ENST00000478573 CYP27C1Q4G0S4 372 aa7.29□□□□□ -1.24
CDC42BPA-212ENST00000478573 SMYD4Q8IYR2 804 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-212ENST00000478573 AGBL5Q8NDL9 886 aa7.29□□□□□ -1.24
CDC42BPA-212ENST00000478573 BCO2Q9BYV7 579 aa7.29□□□□□ -1.24
CDC42BPA-212ENST00000478573 PAK6Q9NQU5 681 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-212ENST00000478573 TMEM39AQ9NV64 488 aa7.29□□□□□ -1.24
CDC42BPA-212ENST00000478573 PNMA6FA0A0J9YX94 578 aa7.28□□□□□ -1.24
CDC42BPA-212ENST00000478573 MAPK1P28482 360 aa7.28□□□□□ -1.24
CDC42BPA-212ENST00000478573 TTLL4Q14679 1199 aa7.28□□□□□ -1.24
CDC42BPA-212ENST00000478573 ZNF574Q6ZN55 896 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-212ENST00000478573 SULF2Q8IWU5 870 aa7.28□□□□□ -1.24
CDC42BPA-212ENST00000478573 FAM181AQ8N9Y4 354 aa7.28□□□□□ -1.24
CDC42BPA-212ENST00000478573 DCTN4Q9UJW0 460 aa7.28□□□□□ -1.24
CDC42BPA-212ENST00000478573 SYNGAP1Q96PV0 1343 aa7.27□□□□□ -1.24
CDC42BPA-212ENST00000478573 KIF4BQ2VIQ3 1234 aa7.27□□□□□ -1.25
CDC42BPA-212ENST00000478573 NXPE4Q6UWF7 544 aa7.27□□□□□ -1.25
CDC42BPA-212ENST00000478573 ARHGAP27Q6ZUM4 889 aa7.27□□□□□ -1.25
CDC42BPA-212ENST00000478573 SSU72Q9NP77 194 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-212ENST00000478573 DISC1Q9NRI5 854 aa7.27□□□□□ -1.25
CDC42BPA-212ENST00000478573 KRT82Q9NSB4 513 aa7.27□□□□□ -1.25
CDC42BPA-212ENST00000478573 SLC5A6Q9Y289 635 aa7.27□□□□□ -1.25
CDC42BPA-212ENST00000478573 BTBD11A6QL63 1104 aa7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 YBX3P16989 372 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 PLCL1Q15111 1095 aa7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 MAP1SQ66K74 1059 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 CBLL1Q75N03 491 aa7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 PLD6Q8N2A8 252 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 STK35Q8TDR2 534 aa7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 ACSBG1Q96GR2 724 aa7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 CBX8Q9HC52 389 aa7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 PODXL2Q9NZ53 605 aa7.26□□□□□ -1.25
CDC42BPA-212ENST00000478573 ZBTB7CA1YPR0 619 aa7.25□□□□□ -1.25
CDC42BPA-212ENST00000478573 XRCC5P13010 732 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-212ENST00000478573 COL19A1Q14993 1142 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms