RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 APOBEC3HQ6NTF7 200 aaKnown RBP8.4□□□□□ -1.06
BRCA1-215ENST00000478531 SLF2Q8IX21 1173 aa8.4□□□□□ -1.06
BRCA1-215ENST00000478531 OTUD7AQ8TE49 926 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-215ENST00000478531 ZNF384Q8TF68 577 aa8.4□□□□□ -1.06
BRCA1-215ENST00000478531 NSUN4Q96CB9 384 aaKnown RBP8.4□□□□□ -1.06
BRCA1-215ENST00000478531 EDC3Q96F86 508 aaKnown RBP8.4□□□□□ -1.06
BRCA1-215ENST00000478531 DEFB129Q9H1M3 183 aa8.4□□□□□ -1.06
BRCA1-215ENST00000478531 MROH7-TTC4A0A0A0MT08 1334 aa8.4□□□□□ -1.06
BRCA1-215ENST00000478531 OTOFQ9HC10 1997 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 FOCADQ5VW36 1801 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 PAPPA2Q9BXP8 1791 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 BTDP43251 543 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 GSTO1P78417 241 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 TNFAIP1Q13829 316 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 PRKG1Q13976 671 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 NAA16Q6N069 864 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-215ENST00000478531 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-215ENST00000478531 LNPKQ9C0E8 428 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 ECHDC1Q9NTX5 307 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 MKRN1Q9UHC7 482 aaKnown RBP8.39□□□□□ -1.07
BRCA1-215ENST00000478531 GAKO14976 1311 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 ATP5JP18859 108 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 GRM1Q13255 1194 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 TTLL12Q14166 644 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-215ENST00000478531 RASA3Q14644 834 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 CDC42EP5Q6NZY7 148 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.39□□□□□ -1.07
BRCA1-215ENST00000478531 NOL10Q9BSC4 688 aaKnown RBP8.39□□□□□ -1.07
BRCA1-215ENST00000478531 MRIQ9BWK5 157 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 TMEM39BQ9GZU3 492 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 USP40Q9NVE5 1235 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 PAG1Q9NWQ8 432 aa8.39□□□□□ -1.07
BRCA1-215ENST00000478531 MAP4K4O95819 1239 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-215ENST00000478531 NEFLP07196 543 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 MX1P20591 662 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 NF2P35240 595 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 TNNI2P48788 182 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 TCP10Q12799 353 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 MAP3K12Q12852 859 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 PICALMQ13492 652 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 TTF1Q15361 905 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-215ENST00000478531 ADGRA1Q86SQ6 560 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 CDAN1Q8IWY9 1227 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 MAGEB6Q8N7X4 407 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 HAUS7Q99871 368 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 GBA2Q9HCG7 927 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-215ENST00000478531 AATFQ9NY61 560 aaKnown RBP eCLIP8.38□□□□□ -1.07
BRCA1-215ENST00000478531 FZD1Q9UP38 647 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 SSC5DA1L4H1 1573 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 NAV1Q8NEY1 1877 aa8.38□□□□□ -1.07
BRCA1-215ENST00000478531 CNTNAP1P78357 1384 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 LDHCP07864 332 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 CYP7A1P22680 504 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 HUNKP57058 714 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 NFIAQ12857 509 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 MOB2Q70IA6 237 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 SMC5Q8IY18 1101 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 C2orf69Q8N8R5 385 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-215ENST00000478531 PPP2R3BQ9Y5P8 575 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 MYH1P12882 1939 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 TTC41PQ6P2S7 1318 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 ERC2O15083 957 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 NBPF12Q5TAG4 269 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-215ENST00000478531 SLC9C2Q5TAH2 1124 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 SAPCD2Q86UD0 394 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 CHD1LQ86WJ1 897 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 MIGA1Q8NAN2 632 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 TLL2Q9Y6L7 1015 aa8.37□□□□□ -1.07
BRCA1-215ENST00000478531 GPR75-ASB3A0A0A6YYF3 556 aa8.36□□□□□ -1.07
BRCA1-215ENST00000478531 PDE6AP16499 860 aa8.36□□□□□ -1.07
BRCA1-215ENST00000478531 RGS3P49796 1198 aa8.36□□□□□ -1.07
BRCA1-215ENST00000478531 NUCB1Q02818 461 aa8.36□□□□□ -1.07
BRCA1-215ENST00000478531 TEX11Q8IYF3 940 aa8.36□□□□□ -1.07
BRCA1-215ENST00000478531 SH3RF3Q8TEJ3 882 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-215ENST00000478531 FAM163AQ96GL9 167 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-215ENST00000478531 FAM198AQ9UFP1 575 aa8.36□□□□□ -1.07
BRCA1-215ENST00000478531 RFX7Q2KHR2 1363 aa8.36□□□□□ -1.07
BRCA1-215ENST00000478531 SALL3Q9BXA9 1300 aa8.36□□□□□ -1.07
BRCA1-215ENST00000478531 ZNF532Q9HCE3 1301 aa8.36□□□□□ -1.07
BRCA1-215ENST00000478531 BAZ2AQ9UIF9 1905 aaKnown RBP8.36□□□□□ -1.07
BRCA1-215ENST00000478531 WDHD1O75717 1129 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-215ENST00000478531 GLRX3O76003 335 aaKnown RBP8.35□□□□□ -1.07
BRCA1-215ENST00000478531 BAG3O95817 575 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 RHBDL3P58872 404 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 DYNLL1P63167 89 aaKnown RBP8.35□□□□□ -1.07
BRCA1-215ENST00000478531 DEFB115Q30KQ5 88 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 SUPT20HL1Q3ZLR7 823 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 SLFNL1Q499Z3 407 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 CYP4F22Q6NT55 531 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 FAM83AQ86UY5 434 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 ZSCAN29Q8IWY8 852 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-215ENST00000478531 PI4K2BQ8TCG2 481 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 KLRG1Q96E93 195 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 TEPSINQ96N21 525 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.35□□□□□ -1.07
BRCA1-215ENST00000478531 DDX4Q9NQI0 724 aaKnown RBP8.35□□□□□ -1.07
BRCA1-215ENST00000478531 ANGEL1Q9UNK9 670 aaKnown RBP8.35□□□□□ -1.07
BRCA1-215ENST00000478531 RPAP1Q9BWH6 1393 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-215ENST00000478531 RASSF10A6NK89 507 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 208.6 ms