RNA–Protein interactions for RNA: ENST00000478499.3

RN7SL259P-201, Transcript of RNA, 7SL, cytoplasmic 259, pseudogene, humanhuman

BASIC

Gene RN7SL259P, Length 253 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL259P-201ENST00000478499 DNAJB2P25686 324 aa9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 FLT3LGP49771 235 aa9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 MMP14P50281 582 aa9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 FCGRTP55899 365 aa9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 RIPK4P57078 832 aa9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 PROSER3Q2NL68 480 aa9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 ZBTB38Q8NAP3 1195 aaPredicted RBP9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 RTF1Q92541 710 aaKnown RBP9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 TSR2Q969E8 191 aaKnown RBP9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 MYH16Q9H6N6 1097 aa9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 TNNQ9UQP3 1299 aa9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 ZNF292O60281 2723 aa9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 TPRP12270 2363 aaKnown RBP9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
RN7SL259P-201ENST00000478499 FASNP49327 2511 aaKnown RBP9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 ANKRD36CQ5JPF3 1778 aa9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 TLL1O43897 1013 aa9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 BCRP11274 1271 aa9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 CETPP11597 493 aa9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 EIF2S2P20042 333 aaKnown RBP9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 EXOSC9Q06265 439 aaKnown RBP9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 TAF7Q15545 349 aaPredicted RBP9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 KIF6Q6ZMV9 814 aa9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 DDX46Q7L014 1031 aaKnown RBP9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 PNNQ9H307 717 aaKnown RBP9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 ZNF804BA4D1E1 1349 aa9.04□□□□□ -0.96
RN7SL259P-201ENST00000478499 USP17L3A6NCW0 530 aa9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 USP17L4A6NCW7 530 aa9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 ERC2O15083 957 aa9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 CT47B1P0C2W7 299 aaPredicted RBP9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 RLBP1P12271 317 aa9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 AIMP1Q12904 312 aaKnown RBP9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 SUPT20HL1Q3ZLR7 823 aa9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 RTL5Q5HYW3 569 aaPredicted RBP9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 USP17L1Q7RTZ2 530 aa9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 PODNQ7Z5L7 613 aa9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 PANK1Q8TE04 598 aa9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 ZC3H12CQ9C0D7 883 aaKnown RBP9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 PODXL2Q9NZ53 605 aa9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 GPR179Q6PRD1 2367 aa9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 TCF20Q9UGU0 1960 aaKnown RBP9.03□□□□□ -0.96
RN7SL259P-201ENST00000478499 SPDYE5A6NIY4 337 aa9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 GFRA3O60609 400 aa9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 ZNF853P0CG23 659 aa9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 EIF4A1P60842 406 aaKnown RBP9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 CCDC85BQ15834 202 aaPredicted RBP9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 PARP10Q53GL7 1025 aa9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 NBPF12Q5TAG4 269 aaPredicted RBP9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 PPP1R42Q7Z4L9 355 aa9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 OGFOD1Q8N543 542 aa9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 TSPYL2Q9H2G4 693 aaPredicted RBP9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 CD320Q9NPF0 282 aa9.02□□□□□ -0.97
RN7SL259P-201ENST00000478499 VGLL4Q14135 290 aa9.01□□□□□ -0.97
RN7SL259P-201ENST00000478499 ACAP1Q15027 740 aa9.01□□□□□ -0.97
RN7SL259P-201ENST00000478499 PDIA6Q15084 440 aa9.01□□□□□ -0.97
RN7SL259P-201ENST00000478499 DACT2Q5SW24 774 aa9.01□□□□□ -0.97
RN7SL259P-201ENST00000478499 SKAP1Q86WV1 359 aa9.01□□□□□ -0.97
RN7SL259P-201ENST00000478499 TIFAQ96CG3 184 aa9.01□□□□□ -0.97
RN7SL259P-201ENST00000478499 UTP14AQ9BVJ6 771 aaKnown RBP9.01□□□□□ -0.97
RN7SL259P-201ENST00000478499 PRDM12Q9H4Q4 367 aa9.01□□□□□ -0.97
RN7SL259P-201ENST00000478499 MYO3BQ8WXR4 1341 aa9.01□□□□□ -0.97
RN7SL259P-201ENST00000478499 LRRC37A2A6NM11 1700 aa9□□□□□ -0.97
RN7SL259P-201ENST00000478499 USP24Q9UPU5 2620 aa9□□□□□ -0.97
RN7SL259P-201ENST00000478499 KRT24Q2M2I5 525 aa9□□□□□ -0.97
RN7SL259P-201ENST00000478499 GIGYF2Q6Y7W6 1299 aaKnown RBP9□□□□□ -0.97
RN7SL259P-201ENST00000478499 ANKRD23Q86SG2 305 aa9□□□□□ -0.97
RN7SL259P-201ENST00000478499 SSH1Q8WYL5 1049 aa9□□□□□ -0.97
RN7SL259P-201ENST00000478499 JARID2Q92833 1246 aaPredicted RBP9□□□□□ -0.97
RN7SL259P-201ENST00000478499 CELF1Q92879 486 aaKnown RBP9□□□□□ -0.97
RN7SL259P-201ENST00000478499 COG6Q9Y2V7 657 aa9□□□□□ -0.97
RN7SL259P-201ENST00000478499 NUP98P52948 1817 aa9□□□□□ -0.97
RN7SL259P-201ENST00000478499 FLNBO75369 2602 aaKnown RBP9□□□□□ -0.97
RN7SL259P-201ENST00000478499 GVINP1Q7Z2Y8 2422 aa8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 HMGCRP04035 888 aa8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 CENPQQ7L2Z9 268 aaPredicted RBP8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 LRP10Q7Z4F1 713 aa8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 NLRP10Q86W26 655 aa8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 PRSS33Q8NF86 280 aa8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 UIMC1Q96RL1 719 aa8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 MXD3Q9BW11 206 aa8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 IFT57Q9NWB7 429 aa8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 TRMT112Q9UI30 125 aaKnown RBP8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 CACNA1HO95180 2353 aa8.99□□□□□ -0.97
RN7SL259P-201ENST00000478499 MED19A0JLT2 244 aaPredicted RBP8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 SNAPC2Q13487 334 aa8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 MAP3K21Q5TCX8 1036 aa8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 COPS6Q7L5N1 327 aa8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 RIC3Q7Z5B4 369 aa8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 XAGE3Q8WTP9 111 aa8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 FRAT1Q92837 279 aaPredicted RBP8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 CLUAP1Q96AJ1 413 aa8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 FAM89AQ96GI7 184 aa8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 RNPC3Q96LT9 517 aaKnown RBP8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 CNTNAP3BQ96NU0 1288 aa8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 CCDC85AQ96PX6 553 aaPredicted RBP8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 CNTNAP3Q9BZ76 1288 aa8.98□□□□□ -0.97
RN7SL259P-201ENST00000478499 HMX1Q9NP08 348 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms