RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 PDE6AP16499 860 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 PAF1Q8N7H5 531 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 TRPM1Q7Z4N2 1603 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 LETM2Q2VYF4 491 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 AKNAD1Q5T1N1 836 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 GBP3Q9H0R5 595 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 RBSNQ9H1K0 784 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 ANKARQ7Z5J8 1434 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 BCORL1Q5H9F3 1711 aa16.16■□□□□ 0.18
NPHP4-208ENST00000478423 WDHD1O75717 1129 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-208ENST00000478423 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-208ENST00000478423 CRACR2AQ9BSW2 395 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 SSH2Q76I76 1423 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 BCAMP50895 628 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 RASEFQ8IZ41 740 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 SPAG5Q96R06 1193 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 FBXO3Q9UK99 471 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 GADD45BO75293 160 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-208ENST00000478423 PDE8BO95263 885 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 CLCN1P35523 988 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 KRT40Q6A162 431 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 LMBRD1Q9NUN5 540 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 IFNKQ9P0W0 207 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 ZNF335Q9H4Z2 1342 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-208ENST00000478423 USP17L12C9JPN9 530 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 USP17L21D6R901 530 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 IL6STP40189 918 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-208ENST00000478423 CEP135Q66GS9 1140 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 ZSWIM4Q9H7M6 989 aa16.15■□□□□ 0.18
NPHP4-208ENST00000478423 CWC15Q9P013 229 aaKnown RBP16.15■□□□□ 0.18
NPHP4-208ENST00000478423 H0YHG0 523 aa16.14■□□□□ 0.17
NPHP4-208ENST00000478423 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
NPHP4-208ENST00000478423 UNC13BO14795 1591 aa16.14■□□□□ 0.17
NPHP4-208ENST00000478423 ELP1O95163 1332 aa16.14■□□□□ 0.17
NPHP4-208ENST00000478423 FGAP02671 866 aa16.14■□□□□ 0.17
NPHP4-208ENST00000478423 NEFHP12036 1026 aa16.14■□□□□ 0.17
NPHP4-208ENST00000478423 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
NPHP4-208ENST00000478423 NBPF14Q5TI25 921 aa16.14■□□□□ 0.17
NPHP4-208ENST00000478423 MAPKAPK5Q8IW41 473 aa16.14■□□□□ 0.17
NPHP4-208ENST00000478423 GTF3C6Q969F1 213 aa16.14■□□□□ 0.17
NPHP4-208ENST00000478423 ZSWIM6Q9HCJ5 1215 aa16.14■□□□□ 0.17
NPHP4-208ENST00000478423 CETN2P41208 172 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 PHKA1P46020 1223 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 AXIN2Q9Y2T1 843 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 hCG_1642624A0A1W2PR95 340 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 POLD1P28340 1107 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 NOP2P46087 812 aaKnown RBP16.13■□□□□ 0.17
NPHP4-208ENST00000478423 PKP1Q13835 747 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 KCNH3Q9ULD8 1083 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.13■□□□□ 0.17
NPHP4-208ENST00000478423 PTGS1P23219 599 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 ADORA1P30542 326 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 MRPL12P52815 198 aaKnown RBP16.13■□□□□ 0.17
NPHP4-208ENST00000478423 TAF3Q5VWG9 929 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 PIK3AP1Q6ZUJ8 805 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 TPCN1Q9ULQ1 816 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 CYP27B1O15528 508 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 MMRN2Q9H8L6 949 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 STK32BQ9NY57 414 aa16.13■□□□□ 0.17
NPHP4-208ENST00000478423 RRP9O43818 475 aaKnown RBP16.12■□□□□ 0.17
NPHP4-208ENST00000478423 BRINP3Q76B58 766 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 CCDC66A2RUB6 948 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 TFAP4Q01664 338 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 MYL5Q02045 173 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 MAP4K1Q92918 833 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 TSPYL1Q9H0U9 437 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 DNAI1Q9UI46 699 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 TMCO5BA8MYB1 307 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 USPL1Q5W0Q7 1092 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 TGFBRAP1Q8WUH2 860 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 KCNJ14Q9UNX9 436 aa16.12■□□□□ 0.17
NPHP4-208ENST00000478423 ADCK5Q3MIX3 580 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 SPECC1Q5M775 1068 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 ALS2CR12Q96Q35 445 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 CDC42BPBQ9Y5S2 1711 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 SETD1BQ9UPS6 1966 aaKnown RBP16.11■□□□□ 0.17
NPHP4-208ENST00000478423 PPP2R5BQ15173 497 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 IFNL3Q8IZI9 196 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 SDR42E1Q8WUS8 393 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 LSG1Q9H089 658 aaKnown RBP16.11■□□□□ 0.17
NPHP4-208ENST00000478423 ADD1P35611 737 aaKnown RBP16.11■□□□□ 0.17
NPHP4-208ENST00000478423 CHRNDQ07001 517 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 PRIMPOLQ96LW4 560 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 H0YIN7 160 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 APBA3O96018 575 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 DESP17661 470 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 MFSD14BQ5SR56 506 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 TAX1BP1Q86VP1 789 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 JADE2Q9NQC1 790 aa16.11■□□□□ 0.17
NPHP4-208ENST00000478423 MACROD2A1Z1Q3 448 aa16.1■□□□□ 0.17
NPHP4-208ENST00000478423 KCNQ4P56696 695 aa16.1■□□□□ 0.17
NPHP4-208ENST00000478423 PPARAQ07869 468 aa16.1■□□□□ 0.17
NPHP4-208ENST00000478423 FAM47AQ5JRC9 791 aa16.1■□□□□ 0.17
NPHP4-208ENST00000478423 TMEM63CQ9P1W3 806 aa16.1■□□□□ 0.17
NPHP4-208ENST00000478423 PAXBP1Q9Y5B6 917 aa16.1■□□□□ 0.17
NPHP4-208ENST00000478423 POLR2DO15514 142 aaKnown RBP16.1■□□□□ 0.17
NPHP4-208ENST00000478423 CERS3Q8IU89 383 aa16.1■□□□□ 0.17
NPHP4-208ENST00000478423 PIGBQ92521 554 aa16.1■□□□□ 0.17
NPHP4-208ENST00000478423 ZNF274Q96GC6 653 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-208ENST00000478423 HEG1Q9ULI3 1381 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms