RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	ZDHHC15	Q96MV8	337 aa		13.42	□□□□□ -0.26
APTX-222	ENST00000478279	ZNF341	Q9BYN7	854 aa		13.42	□□□□□ -0.26
APTX-222	ENST00000478279	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.42	□□□□□ -0.26
APTX-222	ENST00000478279	TMOD2	Q9NZR1	351 aa		13.42	□□□□□ -0.26
APTX-222	ENST00000478279	GRM8	O00222	908 aa		13.41	□□□□□ -0.26
APTX-222	ENST00000478279	FARP2	O94887	1054 aa	Predicted RBP	13.41	□□□□□ -0.26
APTX-222	ENST00000478279	CHAF1A	Q13111	956 aa	Predicted RBP	13.41	□□□□□ -0.26
APTX-222	ENST00000478279	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.41	□□□□□ -0.26
APTX-222	ENST00000478279	VPS37D	Q86XT2	251 aa		13.41	□□□□□ -0.26
APTX-222	ENST00000478279	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.41	□□□□□ -0.26
APTX-222	ENST00000478279	KCNH4	Q9UQ05	1017 aa		13.41	□□□□□ -0.26
APTX-222	ENST00000478279		F6X3S4	739 aa		13.4	□□□□□ -0.26
APTX-222	ENST00000478279	SGPL1	O95470	568 aa		13.4	□□□□□ -0.26
APTX-222	ENST00000478279	CAPN2	P17655	700 aa		13.4	□□□□□ -0.26
APTX-222	ENST00000478279	INPP5B	P32019	993 aa		13.4	□□□□□ -0.26
APTX-222	ENST00000478279	PRKCZ	Q05513	592 aa		13.4	□□□□□ -0.26
APTX-222	ENST00000478279	MOGS	Q13724	837 aa		13.4	□□□□□ -0.26
APTX-222	ENST00000478279	WWC1	Q8IX03	1113 aa		13.4	□□□□□ -0.26
APTX-222	ENST00000478279	SLAIN1	Q8ND83	568 aa		13.4	□□□□□ -0.26
APTX-222	ENST00000478279	PUS3	Q9BZE2	481 aa	Known RBP	13.4	□□□□□ -0.26
APTX-222	ENST00000478279	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-222	ENST00000478279	IL16	Q14005	1332 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	SOX1	O00570	391 aa	Predicted RBP	13.39	□□□□□ -0.27
APTX-222	ENST00000478279	EVI5	O60447	810 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	VAMP4	O75379	141 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	FRAT2	O75474	233 aa	Predicted RBP	13.39	□□□□□ -0.27
APTX-222	ENST00000478279	BCR	P11274	1271 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	FCGRT	P55899	365 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	MIGA2	Q7L4E1	593 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	LRCH3	Q96II8	777 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	PARK7	Q99497	189 aa	Known RBP	13.39	□□□□□ -0.27
APTX-222	ENST00000478279	UNC93B1	Q9H1C4	597 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.39	□□□□□ -0.27
APTX-222	ENST00000478279	ZNF112	Q9UJU3	913 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	SUGT1	Q9Y2Z0	365 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	MROH5	Q6ZUA9	1318 aa		13.39	□□□□□ -0.27
APTX-222	ENST00000478279	MNX1	P50219	401 aa	Predicted RBP	13.38	□□□□□ -0.27
APTX-222	ENST00000478279	CAVIN4	Q5BKX8	364 aa		13.38	□□□□□ -0.27
APTX-222	ENST00000478279	HHIPL2	Q6UWX4	724 aa		13.38	□□□□□ -0.27
APTX-222	ENST00000478279	FAM151A	Q8WW52	585 aa		13.38	□□□□□ -0.27
APTX-222	ENST00000478279	GABRQ	Q9UN88	632 aa		13.38	□□□□□ -0.27
APTX-222	ENST00000478279	MGAM	O43451	1857 aa		13.38	□□□□□ -0.27
APTX-222	ENST00000478279	MAST3	O60307	1309 aa		13.38	□□□□□ -0.27
APTX-222	ENST00000478279	CXCL11	O14625	94 aa		13.37	□□□□□ -0.27
APTX-222	ENST00000478279	ADCY3	O60266	1144 aa		13.37	□□□□□ -0.27
APTX-222	ENST00000478279	GPAT2	Q6NUI2	795 aa		13.37	□□□□□ -0.27
APTX-222	ENST00000478279	STAP2	Q9UGK3	403 aa		13.37	□□□□□ -0.27
APTX-222	ENST00000478279	ALDH1L1	O75891	902 aa		13.36	□□□□□ -0.27
APTX-222	ENST00000478279	TFRC	P02786	760 aa	Known RBP	13.36	□□□□□ -0.27
APTX-222	ENST00000478279	CYP2C8	P10632	490 aa		13.36	□□□□□ -0.27
APTX-222	ENST00000478279	NOL9	Q5SY16	702 aa	Known RBP	13.36	□□□□□ -0.27
APTX-222	ENST00000478279	PXYLP1	Q8TE99	480 aa		13.36	□□□□□ -0.27
APTX-222	ENST00000478279	AK9	Q5TCS8	1911 aa		13.36	□□□□□ -0.27
APTX-222	ENST00000478279	UNC80	Q8N2C7	3258 aa		13.36	□□□□□ -0.27
APTX-222	ENST00000478279	FANCI	Q9NVI1	1328 aa		13.36	□□□□□ -0.27
APTX-222	ENST00000478279	PDE8B	O95263	885 aa		13.35	□□□□□ -0.27
APTX-222	ENST00000478279	INHA	P05111	366 aa		13.35	□□□□□ -0.27
APTX-222	ENST00000478279	FLT3LG	P49771	235 aa		13.35	□□□□□ -0.27
APTX-222	ENST00000478279	BCAM	P50895	628 aa		13.35	□□□□□ -0.27
APTX-222	ENST00000478279	NCBP3	Q53F19	620 aa	Known RBP	13.35	□□□□□ -0.27
APTX-222	ENST00000478279	METTL24	Q5JXM2	366 aa		13.35	□□□□□ -0.27
APTX-222	ENST00000478279	GPR153	Q6NV75	609 aa		13.35	□□□□□ -0.27
APTX-222	ENST00000478279	KAZALD1	Q96I82	304 aa		13.35	□□□□□ -0.27
APTX-222	ENST00000478279	SUCLG2	Q96I99	432 aa		13.35	□□□□□ -0.27
APTX-222	ENST00000478279	DEFB118	Q96PH6	123 aa		13.35	□□□□□ -0.27
APTX-222	ENST00000478279	ELN	P15502	786 aa		13.34	□□□□□ -0.27
APTX-222	ENST00000478279	BMP8B	P34820	402 aa		13.34	□□□□□ -0.27
APTX-222	ENST00000478279	IRF5	Q13568	498 aa		13.34	□□□□□ -0.27
APTX-222	ENST00000478279	LRRC24	Q50LG9	513 aa		13.34	□□□□□ -0.27
APTX-222	ENST00000478279	FASTKD5	Q7L8L6	764 aa	Known RBP	13.34	□□□□□ -0.27
APTX-222	ENST00000478279	PAWR	Q96IZ0	340 aa	Known RBP	13.34	□□□□□ -0.27
APTX-222	ENST00000478279	GDF15	Q99988	308 aa		13.34	□□□□□ -0.27
APTX-222	ENST00000478279	SRCIN1	Q9C0H9	1055 aa		13.34	□□□□□ -0.27
APTX-222	ENST00000478279	CRISPLD2	Q9H0B8	497 aa		13.34	□□□□□ -0.27
APTX-222	ENST00000478279	PAK6	Q9NQU5	681 aa	Predicted RBP	13.34	□□□□□ -0.27
APTX-222	ENST00000478279	DOCK3	Q8IZD9	2030 aa		13.34	□□□□□ -0.27
APTX-222	ENST00000478279		A0A0G2JLL6	359 aa	Predicted RBP	13.33	□□□□□ -0.28
APTX-222	ENST00000478279	EXOSC9	Q06265	439 aa	Known RBP	13.33	□□□□□ -0.28
APTX-222	ENST00000478279	TCP10	Q12799	353 aa		13.33	□□□□□ -0.28
APTX-222	ENST00000478279	NECAB2	Q7Z6G3	386 aa		13.33	□□□□□ -0.28
APTX-222	ENST00000478279	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.33	□□□□□ -0.28
APTX-222	ENST00000478279	VGLL2	Q8N8G2	317 aa		13.33	□□□□□ -0.28
APTX-222	ENST00000478279	KIF16B	Q96L93	1317 aa		13.33	□□□□□ -0.28
APTX-222	ENST00000478279	ALPK3	Q96L96	1907 aa		13.33	□□□□□ -0.28
APTX-222	ENST00000478279	TNPO2	O14787	897 aa	Known RBP	13.32	□□□□□ -0.28
APTX-222	ENST00000478279	NFIA	Q12857	509 aa		13.32	□□□□□ -0.28
APTX-222	ENST00000478279	RABL6	Q3YEC7	729 aa	Predicted RBP	13.32	□□□□□ -0.28
APTX-222	ENST00000478279	CDC42EP5	Q6NZY7	148 aa		13.32	□□□□□ -0.28
APTX-222	ENST00000478279	SLC4A10	Q6U841	1118 aa		13.32	□□□□□ -0.28
APTX-222	ENST00000478279	WDR66	Q8TBY9	1149 aa		13.32	□□□□□ -0.28
APTX-222	ENST00000478279	BICC1	Q9H694	974 aa	Known RBP	13.32	□□□□□ -0.28
APTX-222	ENST00000478279	SLC45A1	Q9Y2W3	748 aa		13.32	□□□□□ -0.28
APTX-222	ENST00000478279	DAGLA	Q9Y4D2	1042 aa		13.32	□□□□□ -0.28
APTX-222	ENST00000478279	ZHX2	Q9Y6X8	837 aa		13.32	□□□□□ -0.28
APTX-222	ENST00000478279	IFIT1	P09914	478 aa	Known RBP	13.31	□□□□□ -0.28
APTX-222	ENST00000478279	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.31	□□□□□ -0.28
APTX-222	ENST00000478279	GADL1	Q6ZQY3	521 aa		13.31	□□□□□ -0.28
APTX-222	ENST00000478279	DEFB123	Q8N688	67 aa		13.31	□□□□□ -0.28
APTX-222	ENST00000478279	FAM198A	Q9UFP1	575 aa		13.31	□□□□□ -0.28
APTX-222	ENST00000478279	AFG3L2	Q9Y4W6	797 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms