RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 TNFRSF21O75509 655 aa7.53□□□□□ -1.2
NCKAP1-204ENST00000477988 CD96P40200 585 aa7.53□□□□□ -1.2
NCKAP1-204ENST00000477988 EIF1AXP47813 144 aaKnown RBP7.53□□□□□ -1.2
NCKAP1-204ENST00000477988 HP1BP3Q5SSJ5 553 aaPredicted RBP7.53□□□□□ -1.2
NCKAP1-204ENST00000477988 LRRC56Q8IYG6 542 aaPredicted RBP7.53□□□□□ -1.2
NCKAP1-204ENST00000477988 ASAP3Q8TDY4 903 aa7.53□□□□□ -1.2
NCKAP1-204ENST00000477988 ZFYVE1Q9HBF4 777 aa7.53□□□□□ -1.2
NCKAP1-204ENST00000477988 MAOBP27338 520 aa7.52□□□□□ -1.21
NCKAP1-204ENST00000477988 ASPAP45381 313 aa7.52□□□□□ -1.21
NCKAP1-204ENST00000477988 USP5P45974 858 aa7.52□□□□□ -1.21
NCKAP1-204ENST00000477988 PBXIP1Q96AQ6 731 aa7.52□□□□□ -1.21
NCKAP1-204ENST00000477988 MLANAQ16655 118 aa7.51□□□□□ -1.21
NCKAP1-204ENST00000477988 AKAP4Q5JQC9 854 aa7.51□□□□□ -1.21
NCKAP1-204ENST00000477988 ZSWIM9Q86XI8 627 aa7.51□□□□□ -1.21
NCKAP1-204ENST00000477988 FAM181AQ8N9Y4 354 aa7.51□□□□□ -1.21
NCKAP1-204ENST00000477988 LMCD1Q9NZU5 365 aa7.51□□□□□ -1.21
NCKAP1-204ENST00000477988 CRIM1Q9NZV1 1036 aa7.51□□□□□ -1.21
NCKAP1-204ENST00000477988 POLIQ9UNA4 740 aa7.51□□□□□ -1.21
NCKAP1-204ENST00000477988 DAGLAQ9Y4D2 1042 aa7.51□□□□□ -1.21
NCKAP1-204ENST00000477988 ZSCAN22P10073 491 aaPredicted RBP7.5□□□□□ -1.21
NCKAP1-204ENST00000477988 MPSTP25325 297 aa7.5□□□□□ -1.21
NCKAP1-204ENST00000477988 PEAR1Q5VY43 1037 aaPredicted RBP7.5□□□□□ -1.21
NCKAP1-204ENST00000477988 PPP1R16BQ96T49 567 aa7.5□□□□□ -1.21
NCKAP1-204ENST00000477988 AMOTL2Q9Y2J4 779 aa7.5□□□□□ -1.21
NCKAP1-204ENST00000477988 U3KQE9 123 aa7.5□□□□□ -1.21
NCKAP1-204ENST00000477988 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.49□□□□□ -1.21
NCKAP1-204ENST00000477988 CYP11A1P05108 521 aa7.49□□□□□ -1.21
NCKAP1-204ENST00000477988 NPR3P17342 541 aa7.49□□□□□ -1.21
NCKAP1-204ENST00000477988 POU4F3Q15319 338 aa7.49□□□□□ -1.21
NCKAP1-204ENST00000477988 SLC23A3Q6PIS1 610 aa7.49□□□□□ -1.21
NCKAP1-204ENST00000477988 MKNK2Q9HBH9 465 aa7.49□□□□□ -1.21
NCKAP1-204ENST00000477988 AP4E1Q9UPM8 1137 aa7.49□□□□□ -1.21
NCKAP1-204ENST00000477988 IFI16Q16666 785 aaKnown RBP7.48□□□□□ -1.21
NCKAP1-204ENST00000477988 AOC3Q16853 763 aa7.48□□□□□ -1.21
NCKAP1-204ENST00000477988 ZNF423Q2M1K9 1284 aa7.48□□□□□ -1.21
NCKAP1-204ENST00000477988 LGR6Q9HBX8 967 aa7.48□□□□□ -1.21
NCKAP1-204ENST00000477988 RAD18Q9NS91 495 aa7.48□□□□□ -1.21
NCKAP1-204ENST00000477988 SYNGAP1Q96PV0 1343 aa7.48□□□□□ -1.21
NCKAP1-204ENST00000477988 METTL12A8MUP2 240 aa7.47□□□□□ -1.21
NCKAP1-204ENST00000477988 FAM87AP0C7U9 286 aa7.47□□□□□ -1.21
NCKAP1-204ENST00000477988 KCNMB1Q16558 191 aa7.47□□□□□ -1.21
NCKAP1-204ENST00000477988 ECM1Q16610 540 aa7.47□□□□□ -1.21
NCKAP1-204ENST00000477988 ANKLE2Q86XL3 938 aa7.47□□□□□ -1.21
NCKAP1-204ENST00000477988 GTF3C2Q8WUA4 911 aaPredicted RBP7.47□□□□□ -1.21
NCKAP1-204ENST00000477988 CLEC4MQ9H2X3 399 aaPredicted RBP7.47□□□□□ -1.21
NCKAP1-204ENST00000477988 FOXD3Q9UJU5 478 aaPredicted RBP7.47□□□□□ -1.21
NCKAP1-204ENST00000477988 A0A096LPE4 126 aa7.46□□□□□ -1.22
NCKAP1-204ENST00000477988 A0A1W2PPZ6 126 aa7.46□□□□□ -1.22
NCKAP1-204ENST00000477988 ECEL1O95672 775 aa7.46□□□□□ -1.22
NCKAP1-204ENST00000477988 KRT1P04264 644 aa7.46□□□□□ -1.22
NCKAP1-204ENST00000477988 PCDH1Q08174 1060 aa7.46□□□□□ -1.22
NCKAP1-204ENST00000477988 ANGEL2Q5VTE6 544 aaKnown RBP7.46□□□□□ -1.22
NCKAP1-204ENST00000477988 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.22
NCKAP1-204ENST00000477988 HRASLS5Q96KN8 279 aa7.46□□□□□ -1.22
NCKAP1-204ENST00000477988 ZFYVE28Q9HCC9 887 aa7.46□□□□□ -1.22
NCKAP1-204ENST00000477988 LATS2Q9NRM7 1088 aa7.46□□□□□ -1.22
NCKAP1-204ENST00000477988 FAM13AO94988 1023 aa7.45□□□□□ -1.22
NCKAP1-204ENST00000477988 CDK5R2Q13319 367 aa7.45□□□□□ -1.22
NCKAP1-204ENST00000477988 AAMPQ13685 434 aa7.45□□□□□ -1.22
NCKAP1-204ENST00000477988 AMIGO3Q86WK7 504 aa7.45□□□□□ -1.22
NCKAP1-204ENST00000477988 LIN37Q96GY3 246 aaPredicted RBP7.45□□□□□ -1.22
NCKAP1-204ENST00000477988 TRIM56Q9BRZ2 755 aaKnown RBP7.45□□□□□ -1.22
NCKAP1-204ENST00000477988 PLAGL2Q9UPG8 496 aa7.45□□□□□ -1.22
NCKAP1-204ENST00000477988 AOC2O75106 756 aa7.44□□□□□ -1.22
NCKAP1-204ENST00000477988 OXCT1P55809 520 aa7.44□□□□□ -1.22
NCKAP1-204ENST00000477988 SYDE1Q6ZW31 735 aaPredicted RBP7.44□□□□□ -1.22
NCKAP1-204ENST00000477988 CCNJLQ8IV13 435 aa7.44□□□□□ -1.22
NCKAP1-204ENST00000477988 PPP1R9AQ9ULJ8 1098 aa7.44□□□□□ -1.22
NCKAP1-204ENST00000477988 JAG2Q9Y219 1238 aa7.44□□□□□ -1.22
NCKAP1-204ENST00000477988 TMEM265A0A087WTH1 108 aa7.43□□□□□ -1.22
NCKAP1-204ENST00000477988 CEACAM5P06731 702 aa7.43□□□□□ -1.22
NCKAP1-204ENST00000477988 GJD3Q8N144 294 aa7.43□□□□□ -1.22
NCKAP1-204ENST00000477988 CORO1BQ9BR76 489 aa7.43□□□□□ -1.22
NCKAP1-204ENST00000477988 WDR18Q9BV38 432 aa7.43□□□□□ -1.22
NCKAP1-204ENST00000477988 C1QTNF9P0C862 333 aa7.42□□□□□ -1.22
NCKAP1-204ENST00000477988 TNKS2Q9H2K2 1166 aa7.42□□□□□ -1.22
NCKAP1-204ENST00000477988 PRDM7Q9NQW5 492 aa7.42□□□□□ -1.22
NCKAP1-204ENST00000477988 FZD6O60353 706 aa7.41□□□□□ -1.22
NCKAP1-204ENST00000477988 SSFA2P28290 1259 aa7.41□□□□□ -1.22
NCKAP1-204ENST00000477988 SF3B2Q13435 895 aaKnown RBP7.41□□□□□ -1.22
NCKAP1-204ENST00000477988 GALNT12Q8IXK2 581 aa7.41□□□□□ -1.22
NCKAP1-204ENST00000477988 TCF12Q99081 682 aa7.41□□□□□ -1.22
NCKAP1-204ENST00000477988 LIN7BQ9HAP6 207 aa7.41□□□□□ -1.22
NCKAP1-204ENST00000477988 SERPINA10Q9UK55 444 aa7.41□□□□□ -1.22
NCKAP1-204ENST00000477988 CTNND2Q9UQB3 1225 aa7.41□□□□□ -1.22
NCKAP1-204ENST00000477988 MTMR7Q9Y216 660 aa7.41□□□□□ -1.22
NCKAP1-204ENST00000477988 A0A1W2PP55 124 aa7.4□□□□□ -1.22
NCKAP1-204ENST00000477988 TMPRSS2O15393 492 aa7.4□□□□□ -1.22
NCKAP1-204ENST00000477988 B3GALT4O96024 378 aa7.4□□□□□ -1.22
NCKAP1-204ENST00000477988 GRIA4P48058 902 aa7.4□□□□□ -1.22
NCKAP1-204ENST00000477988 MTMR3Q13615 1198 aa7.4□□□□□ -1.22
NCKAP1-204ENST00000477988 FYB2Q5VWT5 728 aa7.4□□□□□ -1.22
NCKAP1-204ENST00000477988 PRR23BQ6ZRT6 265 aa7.4□□□□□ -1.22
NCKAP1-204ENST00000477988 CCDC97Q96F63 343 aaPredicted RBP7.4□□□□□ -1.22
NCKAP1-204ENST00000477988 SNX11Q9Y5W9 270 aa7.4□□□□□ -1.22
NCKAP1-204ENST00000477988 LEFTY1O75610 366 aa7.39□□□□□ -1.23
NCKAP1-204ENST00000477988 SPRED3Q2MJR0 410 aa7.39□□□□□ -1.23
NCKAP1-204ENST00000477988 INHBBP09529 407 aa7.38□□□□□ -1.23
NCKAP1-204ENST00000477988 FKBP4Q02790 459 aaKnown RBP eCLIP7.38□□□□□ -1.23
NCKAP1-204ENST00000477988 DUSP23Q9BVJ7 150 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms