RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 WBP1LQ9NX94 342 aa10.3□□□□□ -0.76
ERCC8-205ENST00000477893 CEP126Q9P2H0 1117 aa10.3□□□□□ -0.76
ERCC8-205ENST00000477893 HDAC5Q9UQL6 1122 aa10.3□□□□□ -0.76
ERCC8-205ENST00000477893 FAM205AQ6ZU69 1335 aa10.3□□□□□ -0.76
ERCC8-205ENST00000477893 MYO1BO43795 1136 aa10.29□□□□□ -0.76
ERCC8-205ENST00000477893 CIAO1O76071 339 aa10.29□□□□□ -0.76
ERCC8-205ENST00000477893 RLBP1P12271 317 aa10.29□□□□□ -0.76
ERCC8-205ENST00000477893 FGFR2P21802 821 aa10.29□□□□□ -0.76
ERCC8-205ENST00000477893 ADORA1P30542 326 aa10.29□□□□□ -0.76
ERCC8-205ENST00000477893 NF2P35240 595 aa10.29□□□□□ -0.76
ERCC8-205ENST00000477893 PBX2P40425 430 aa10.29□□□□□ -0.76
ERCC8-205ENST00000477893 CTCFP49711 727 aaPredicted RBP10.29□□□□□ -0.76
ERCC8-205ENST00000477893 LPIN2Q92539 896 aa10.29□□□□□ -0.76
ERCC8-205ENST00000477893 ZBED3Q96IU2 234 aaPredicted RBP10.29□□□□□ -0.76
ERCC8-205ENST00000477893 PRMT6Q96LA8 375 aaPredicted RBP10.29□□□□□ -0.76
ERCC8-205ENST00000477893 ARAP2Q8WZ64 1704 aa10.29□□□□□ -0.76
ERCC8-205ENST00000477893 COL1A1P02452 1464 aaPredicted RBP10.29□□□□□ -0.76
ERCC8-205ENST00000477893 PNMA6EA0A0J9YXQ4 647 aa10.28□□□□□ -0.76
ERCC8-205ENST00000477893 HSPA8P11142 646 aaKnown RBP10.28□□□□□ -0.76
ERCC8-205ENST00000477893 IL15P40933 162 aaPredicted RBP10.28□□□□□ -0.76
ERCC8-205ENST00000477893 CRKP46108 304 aa10.28□□□□□ -0.76
ERCC8-205ENST00000477893 CACNB3P54284 484 aa10.28□□□□□ -0.76
ERCC8-205ENST00000477893 FKBP1AP62942 108 aaKnown RBP10.28□□□□□ -0.76
ERCC8-205ENST00000477893 TFCP2Q12800 502 aa10.28□□□□□ -0.76
ERCC8-205ENST00000477893 DZIP1LQ8IYY4 767 aaKnown RBP10.28□□□□□ -0.76
ERCC8-205ENST00000477893 PANK1Q8TE04 598 aa10.28□□□□□ -0.76
ERCC8-205ENST00000477893 DEFB129Q9H1M3 183 aa10.28□□□□□ -0.76
ERCC8-205ENST00000477893 TDRD3Q9H7E2 651 aaKnown RBP10.28□□□□□ -0.76
ERCC8-205ENST00000477893 PAPPA2Q9BXP8 1791 aa10.28□□□□□ -0.76
ERCC8-205ENST00000477893 FAM155AB1AL88 458 aaPredicted RBP10.27□□□□□ -0.77
ERCC8-205ENST00000477893 TCP10L2B9ZVM9 353 aa10.27□□□□□ -0.77
ERCC8-205ENST00000477893 SLC10A3P09131 477 aa10.27□□□□□ -0.77
ERCC8-205ENST00000477893 MAP2K2P36507 400 aa10.27□□□□□ -0.77
ERCC8-205ENST00000477893 PHKA1P46020 1223 aa10.27□□□□□ -0.77
ERCC8-205ENST00000477893 KIF23Q02241 960 aaPredicted RBP10.27□□□□□ -0.77
ERCC8-205ENST00000477893 NOGQ13253 232 aa10.27□□□□□ -0.77
ERCC8-205ENST00000477893 OS9Q13438 667 aaPredicted RBP10.27□□□□□ -0.77
ERCC8-205ENST00000477893 IFFO2Q5TF58 517 aa10.27□□□□□ -0.77
ERCC8-205ENST00000477893 RASAL3Q86YV0 1011 aa10.27□□□□□ -0.77
ERCC8-205ENST00000477893 HHIPL1Q96JK4 782 aa10.27□□□□□ -0.77
ERCC8-205ENST00000477893 COPRSQ9NQ92 184 aa10.27□□□□□ -0.77
ERCC8-205ENST00000477893 ZNF70Q9UC06 446 aaPredicted RBP10.27□□□□□ -0.77
ERCC8-205ENST00000477893 ANGEL1Q9UNK9 670 aaKnown RBP10.27□□□□□ -0.77
ERCC8-205ENST00000477893 LHX6Q9UPM6 363 aa10.27□□□□□ -0.77
ERCC8-205ENST00000477893 SSC5DA1L4H1 1573 aa10.26□□□□□ -0.77
ERCC8-205ENST00000477893 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
ERCC8-205ENST00000477893 MMP14P50281 582 aa10.26□□□□□ -0.77
ERCC8-205ENST00000477893 TIMM10P62072 90 aa10.26□□□□□ -0.77
ERCC8-205ENST00000477893 RASA3Q14644 834 aa10.26□□□□□ -0.77
ERCC8-205ENST00000477893 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
ERCC8-205ENST00000477893 TBC1D22AQ8WUA7 517 aa10.26□□□□□ -0.77
ERCC8-205ENST00000477893 TEKT1Q969V4 418 aa10.26□□□□□ -0.77
ERCC8-205ENST00000477893 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
ERCC8-205ENST00000477893 NEUROD6Q96NK8 337 aa10.26□□□□□ -0.77
ERCC8-205ENST00000477893 GNL3LQ9NVN8 582 aaKnown RBP10.26□□□□□ -0.77
ERCC8-205ENST00000477893 SERPINA10Q9UK55 444 aa10.26□□□□□ -0.77
ERCC8-205ENST00000477893 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.26□□□□□ -0.77
ERCC8-205ENST00000477893 A0A1B0GUL7 405 aa10.25□□□□□ -0.77
ERCC8-205ENST00000477893 FKBP1BP68106 108 aa10.25□□□□□ -0.77
ERCC8-205ENST00000477893 G3BP1Q13283 466 aaKnown RBP eCLIP10.25□□□□□ -0.77
ERCC8-205ENST00000477893 DIXDC1Q155Q3 683 aa10.25□□□□□ -0.77
ERCC8-205ENST00000477893 GORABQ5T7V8 394 aa10.25□□□□□ -0.77
ERCC8-205ENST00000477893 NBPF12Q5TAG4 269 aaPredicted RBP10.25□□□□□ -0.77
ERCC8-205ENST00000477893 ARMC9Q7Z3E5 817 aa10.25□□□□□ -0.77
ERCC8-205ENST00000477893 CCDC102AQ96A19 550 aa10.25□□□□□ -0.77
ERCC8-205ENST00000477893 BCL11AQ9H165 835 aa10.25□□□□□ -0.77
ERCC8-205ENST00000477893 ECM29Q5VYK3 1845 aa10.24□□□□□ -0.77
ERCC8-205ENST00000477893 PRDX5P30044 214 aa10.24□□□□□ -0.77
ERCC8-205ENST00000477893 MTX1Q13505 466 aa10.24□□□□□ -0.77
ERCC8-205ENST00000477893 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
ERCC8-205ENST00000477893 WDR66Q8TBY9 1149 aa10.24□□□□□ -0.77
ERCC8-205ENST00000477893 XAGE2Q96GT9 111 aa10.24□□□□□ -0.77
ERCC8-205ENST00000477893 CLMNQ96JQ2 1002 aa10.24□□□□□ -0.77
ERCC8-205ENST00000477893 YTHDC1Q96MU7 727 aaKnown RBP10.24□□□□□ -0.77
ERCC8-205ENST00000477893 TMEM39BQ9GZU3 492 aa10.24□□□□□ -0.77
ERCC8-205ENST00000477893 MYH13Q9UKX3 1938 aa10.24□□□□□ -0.77
ERCC8-205ENST00000477893 SURF6O75683 361 aaKnown RBP10.23□□□□□ -0.77
ERCC8-205ENST00000477893 TRPA1O75762 1119 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 LDHBP07195 334 aaKnown RBP10.23□□□□□ -0.77
ERCC8-205ENST00000477893 TNFAIP1Q13829 316 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 RASGRF1Q13972 1273 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 SUPT20HL1Q3ZLR7 823 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 PI16Q6UXB8 463 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 PRDM10Q9NQV6 1147 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 TMOD2Q9NZR1 351 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 ABCF2Q9UG63 623 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 DENND2AQ9ULE3 1009 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 AKAP2Q9Y2D5 859 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 PPP2R3BQ9Y5P8 575 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 MAST3O60307 1309 aa10.23□□□□□ -0.77
ERCC8-205ENST00000477893 RIOK3O14730 519 aaKnown RBP10.22□□□□□ -0.77
ERCC8-205ENST00000477893 ZBTB7BO15156 539 aaPredicted RBP10.22□□□□□ -0.77
ERCC8-205ENST00000477893 PPP1R12BO60237 982 aaPredicted RBP10.22□□□□□ -0.77
ERCC8-205ENST00000477893 TNNI2P48788 182 aa10.22□□□□□ -0.77
ERCC8-205ENST00000477893 MVPQ14764 893 aaKnown RBP10.22□□□□□ -0.77
ERCC8-205ENST00000477893 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
ERCC8-205ENST00000477893 DZIP1Q86YF9 867 aaKnown RBP10.22□□□□□ -0.77
ERCC8-205ENST00000477893 CSRNP1Q96S65 589 aa10.22□□□□□ -0.77
ERCC8-205ENST00000477893 ELP3Q9H9T3 547 aa10.22□□□□□ -0.77
ERCC8-205ENST00000477893 RCAN3Q9UKA8 241 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms