RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 KIAA1024Q9UPX6 916 aa6.86□□□□□ -1.31
CKS1B-207ENST00000477676 RAXQ9Y2V3 346 aa6.86□□□□□ -1.31
CKS1B-207ENST00000477676 COL14A1Q05707 1796 aaKnown RBP6.86□□□□□ -1.31
CKS1B-207ENST00000477676 ADGRB1O14514 1584 aa6.86□□□□□ -1.31
CKS1B-207ENST00000477676 SBNO1A3KN83 1393 aa6.85□□□□□ -1.31
CKS1B-207ENST00000477676 GOLGB1Q14789 3259 aaKnown RBP6.85□□□□□ -1.31
CKS1B-207ENST00000477676 PRR36Q9H6K5 1346 aa6.85□□□□□ -1.31
CKS1B-207ENST00000477676 C21orf2O43822 256 aa6.85□□□□□ -1.31
CKS1B-207ENST00000477676 MLLT1Q03111 559 aaPredicted RBP6.85□□□□□ -1.31
CKS1B-207ENST00000477676 SAFB2Q14151 953 aaKnown RBP eCLIP6.85□□□□□ -1.31
CKS1B-207ENST00000477676 TRPM4Q8TD43 1214 aa6.85□□□□□ -1.31
CKS1B-207ENST00000477676 MRPL18Q9H0U6 180 aaKnown RBP6.85□□□□□ -1.31
CKS1B-207ENST00000477676 ZFATQ9P243 1243 aa6.85□□□□□ -1.31
CKS1B-207ENST00000477676 ARHGEF28Q8N1W1 1705 aaKnown RBP6.84□□□□□ -1.31
CKS1B-207ENST00000477676 PHRF1Q9P1Y6 1649 aaKnown RBP6.84□□□□□ -1.31
CKS1B-207ENST00000477676 USP17L3A6NCW0 530 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 USP17L4A6NCW7 530 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 GSC2O15499 205 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 GRNP28799 593 aaKnown RBP6.84□□□□□ -1.31
CKS1B-207ENST00000477676 HDGFL1Q5TGJ6 251 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 USP17L2Q6R6M4 530 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 DHX32Q7L7V1 743 aaKnown RBP6.84□□□□□ -1.31
CKS1B-207ENST00000477676 USP17L1Q7RTZ2 530 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 KRT27Q7Z3Y8 459 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 GAS2L2Q8NHY3 880 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 PMFBP1Q8TBY8 1022 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 PRAM1Q96QH2 718 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 SMG9Q9H0W8 520 aaKnown RBP6.84□□□□□ -1.31
CKS1B-207ENST00000477676 DLC1Q96QB1 1528 aa6.84□□□□□ -1.31
CKS1B-207ENST00000477676 RREB1Q92766 1687 aa6.84□□□□□ -1.32
CKS1B-207ENST00000477676 SBF2Q86WG5 1849 aa6.83□□□□□ -1.32
CKS1B-207ENST00000477676 ATP9BO43861 1147 aa6.83□□□□□ -1.32
CKS1B-207ENST00000477676 IER5Q5VY09 327 aa6.83□□□□□ -1.32
CKS1B-207ENST00000477676 KRT25Q7Z3Z0 450 aa6.83□□□□□ -1.32
CKS1B-207ENST00000477676 OGFOD1Q8N543 542 aa6.83□□□□□ -1.32
CKS1B-207ENST00000477676 STOML1Q9UBI4 398 aa6.83□□□□□ -1.32
CKS1B-207ENST00000477676 MKRN1Q9UHC7 482 aaKnown RBP6.83□□□□□ -1.32
CKS1B-207ENST00000477676 DMGDHQ9UI17 866 aaKnown RBP6.83□□□□□ -1.32
CKS1B-207ENST00000477676 NUP188Q5SRE5 1749 aa6.83□□□□□ -1.32
CKS1B-207ENST00000477676 ITSN1Q15811 1721 aa6.82□□□□□ -1.32
CKS1B-207ENST00000477676 TARSP26639 723 aaKnown RBP6.82□□□□□ -1.32
CKS1B-207ENST00000477676 CLDN10P78369 228 aa6.82□□□□□ -1.32
CKS1B-207ENST00000477676 Q6ZS46 218 aa6.82□□□□□ -1.32
CKS1B-207ENST00000477676 HFE2Q6ZVN8 426 aa6.82□□□□□ -1.32
CKS1B-207ENST00000477676 ZDHHC13Q8IUH4 622 aa6.82□□□□□ -1.32
CKS1B-207ENST00000477676 TSEN2Q8NCE0 465 aaKnown RBP6.82□□□□□ -1.32
CKS1B-207ENST00000477676 C2orf49Q9BVC5 232 aaPredicted RBP6.82□□□□□ -1.32
CKS1B-207ENST00000477676 HIRIP3Q9BW71 556 aaPredicted RBP6.82□□□□□ -1.32
CKS1B-207ENST00000477676 BTG4Q9NY30 223 aa6.82□□□□□ -1.32
CKS1B-207ENST00000477676 BCS1LQ9Y276 419 aa6.82□□□□□ -1.32
CKS1B-207ENST00000477676 CCDC9Q9Y3X0 531 aaKnown RBP6.82□□□□□ -1.32
CKS1B-207ENST00000477676 ANKARQ7Z5J8 1434 aa6.82□□□□□ -1.32
CKS1B-207ENST00000477676 ARHGEF10O15013 1369 aa6.82□□□□□ -1.32
CKS1B-207ENST00000477676 DHX57Q6P158 1386 aaKnown RBP6.82□□□□□ -1.32
CKS1B-207ENST00000477676 TULP4Q9NRJ4 1543 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 SPATA31A5Q5VU36 1347 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 SPATA31A7Q8IWB4 1347 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 TOPAZ1Q8N9V7 1692 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 GLB1P16278 677 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 EPB42P16452 691 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 SPINK2P20155 84 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 GPLD1P80108 840 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 LARP1Q6PKG0 1096 aaKnown RBP6.81□□□□□ -1.32
CKS1B-207ENST00000477676 AGGF1Q8N302 714 aaeCLIP6.81□□□□□ -1.32
CKS1B-207ENST00000477676 STAG2Q8N3U4 1231 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 IFT43Q96FT9 208 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 UBL7Q96S82 380 aaPredicted RBP6.81□□□□□ -1.32
CKS1B-207ENST00000477676 DISP2A7MBM2 1401 aa6.81□□□□□ -1.32
CKS1B-207ENST00000477676 ACIN1Q9UKV3 1341 aaKnown RBP6.8□□□□□ -1.32
CKS1B-207ENST00000477676 TGFBR3LH3BV60 316 aa6.8□□□□□ -1.32
CKS1B-207ENST00000477676 PRKCSHP14314 528 aaPredicted RBP6.8□□□□□ -1.32
CKS1B-207ENST00000477676 R3HDM1Q15032 1099 aaKnown RBP6.8□□□□□ -1.32
CKS1B-207ENST00000477676 INTS5Q6P9B9 1019 aaKnown RBP6.8□□□□□ -1.32
CKS1B-207ENST00000477676 LMO7Q8WWI1 1683 aa6.8□□□□□ -1.32
CKS1B-207ENST00000477676 RGPD5Q99666 1765 aa6.8□□□□□ -1.32
CKS1B-207ENST00000477676 ATP7BP35670 1465 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 SASH3O75995 380 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 RASA1P20936 1047 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 INPP5BP32019 993 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 GRIK1P39086 918 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 SEC13P55735 322 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 SF3B2Q13435 895 aaKnown RBP6.79□□□□□ -1.32
CKS1B-207ENST00000477676 EZH2Q15910 746 aaKnown RBP6.79□□□□□ -1.32
CKS1B-207ENST00000477676 SIX5Q8N196 739 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 CAMKK2Q96RR4 588 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 KRTAP4-2Q9BYR5 136 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 TRAK1Q9UPV9 953 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 CAMTA1Q9Y6Y1 1673 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 PEAK1Q9H792 1746 aa6.79□□□□□ -1.32
CKS1B-207ENST00000477676 NRKQ7Z2Y5 1582 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 CEP350Q5VT06 3117 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 DHX15O43143 795 aaKnown RBP6.78□□□□□ -1.32
CKS1B-207ENST00000477676 WNT11O96014 354 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 RARAP10276 462 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 ARID4AP29374 1257 aaPredicted RBP6.78□□□□□ -1.32
CKS1B-207ENST00000477676 JAG1P78504 1218 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 SETDB1Q15047 1291 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 CHRNA2Q15822 529 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 RTN1Q16799 776 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 DTX1Q86Y01 620 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms