RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 DUOX1Q9NRD9 1551 aa9.36□□□□□ -0.91
VMA21-203ENST00000477649 UBR3Q6ZT12 1888 aa9.36□□□□□ -0.91
VMA21-203ENST00000477649 MYH7P12883 1935 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 APPP05067 770 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 CPA1P15085 419 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 RCAN1P53805 252 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 GSTO1P78417 241 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 LARP1BQ659C4 914 aaKnown RBP9.35□□□□□ -0.91
VMA21-203ENST00000477649 MCTP1Q6DN14 999 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 STOX1Q6ZVD7 989 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 ZNF804AQ7Z570 1209 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 MB21D2Q8IYB1 491 aaPredicted RBP9.35□□□□□ -0.91
VMA21-203ENST00000477649 IFNL3Q8IZI9 196 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 TMTC2Q8N394 836 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 BRF1Q92994 677 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 SYAP1Q96A49 352 aaPredicted RBP9.35□□□□□ -0.91
VMA21-203ENST00000477649 BRIP1Q9BX63 1249 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 PODXL2Q9NZ53 605 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 TFCP2L1Q9NZI6 479 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 WWC3Q9ULE0 1092 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 DDX49Q9Y6V7 483 aaKnown RBP9.35□□□□□ -0.91
VMA21-203ENST00000477649 DOCK2Q92608 1830 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 RGPD3A6NKT7 1758 aaPredicted RBP9.35□□□□□ -0.91
VMA21-203ENST00000477649 RGPD4Q7Z3J3 1758 aa9.35□□□□□ -0.91
VMA21-203ENST00000477649 MAGEB6P1A0A0J9YX57 407 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 POLRMTO00411 1230 aaKnown RBP9.34□□□□□ -0.91
VMA21-203ENST00000477649 FOXP2O15409 715 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 CDKL5O76039 1030 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 MBD4O95243 580 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 APBA3O96018 575 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 F13A1P00488 732 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 CYP7A1P22680 504 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 PDE6BP35913 854 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 GYG1P46976 350 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 PKP1Q13835 747 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 SART3Q15020 963 aaKnown RBP9.34□□□□□ -0.91
VMA21-203ENST00000477649 ATL3Q6DD88 541 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 NAA16Q6N069 864 aaPredicted RBP9.34□□□□□ -0.91
VMA21-203ENST00000477649 CPLX2Q6PUV4 134 aaKnown RBP9.34□□□□□ -0.91
VMA21-203ENST00000477649 AMIGO3Q86WK7 504 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 FAM184AQ8NB25 1140 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 SMARCC2Q8TAQ2 1214 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 TMX4Q9H1E5 349 aaPredicted RBP9.34□□□□□ -0.91
VMA21-203ENST00000477649 ZSCAN16Q9H4T2 348 aaPredicted RBP9.34□□□□□ -0.91
VMA21-203ENST00000477649 LMBRD1Q9NUN5 540 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 RAI14Q9P0K7 980 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 ANKIB1Q9P2G1 1089 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 ANAPC4Q9UJX5 808 aa9.34□□□□□ -0.91
VMA21-203ENST00000477649 IRS2Q9Y4H2 1338 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 GSG1L2A8MUP6 293 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 PRC1O43663 620 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 LARGE1O95461 756 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 CHGBP05060 677 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 LDHCP07864 332 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 SLC3A2P08195 630 aaKnown RBP9.33□□□□□ -0.92
VMA21-203ENST00000477649 ALDH1B1P30837 517 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 LIFRP42702 1097 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 TDO2P48775 406 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 PPP2R5BQ15173 497 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 AKNAD1Q5T1N1 836 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 TTLL5Q6EMB2 1281 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 SLF2Q8IX21 1173 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 SP8Q8IXZ3 490 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 PROM2Q8N271 834 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 TDRD7Q8NHU6 1098 aaKnown RBP9.33□□□□□ -0.92
VMA21-203ENST00000477649 TBC1D22AQ8WUA7 517 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 STAG1Q8WVM7 1258 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 ATP8A2Q9NTI2 1148 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 ABCF2Q9UG63 623 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 GGA1Q9UJY5 639 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 ANGEL1Q9UNK9 670 aaKnown RBP9.33□□□□□ -0.92
VMA21-203ENST00000477649 MTMR6Q9Y217 621 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 SUGT1Q9Y2Z0 365 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 TAF6LQ9Y6J9 622 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 SLC4A4Q9Y6R1 1079 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 BRWD3Q6RI45 1802 aa9.33□□□□□ -0.92
VMA21-203ENST00000477649 GOLGA6L3A6NEY3 463 aa9.32□□□□□ -0.92
VMA21-203ENST00000477649 NPR1P16066 1061 aa9.32□□□□□ -0.92
VMA21-203ENST00000477649 PDIA3P30101 505 aaKnown RBP9.32□□□□□ -0.92
VMA21-203ENST00000477649 ST3GAL1Q11201 340 aa9.32□□□□□ -0.92
VMA21-203ENST00000477649 SLFNL1Q499Z3 407 aa9.32□□□□□ -0.92
VMA21-203ENST00000477649 MFSD6Q6ZSS7 791 aa9.32□□□□□ -0.92
VMA21-203ENST00000477649 SGMS1Q86VZ5 419 aa9.32□□□□□ -0.92
VMA21-203ENST00000477649 NECAB1Q8N987 351 aa9.32□□□□□ -0.92
VMA21-203ENST00000477649 CRNKL1Q9BZJ0 848 aaKnown RBP9.32□□□□□ -0.92
VMA21-203ENST00000477649 SCAND2PQ9GZW5 306 aaPredicted RBP9.32□□□□□ -0.92
VMA21-203ENST00000477649 A0A1B0GUL6 1792 aa9.32□□□□□ -0.92
VMA21-203ENST00000477649 ELP1O95163 1332 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 CCDC196A0A1B0GTZ2 297 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 ERICH2A1L162 156 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 SNAP23O00161 211 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 PRPF40AO75400 957 aaKnown RBP9.31□□□□□ -0.92
VMA21-203ENST00000477649 LETM1O95202 739 aaPredicted RBP9.31□□□□□ -0.92
VMA21-203ENST00000477649 BAG3O95817 575 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 IL1R1P14778 569 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 MRE11P49959 708 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 ZNF445P59923 1031 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 UBE2HP62256 183 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 KRT85P78386 507 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 DDR1Q08345 913 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms