RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 DOCK1Q14185 1865 aa8.4□□□□□ -1.07
RTFDC1-206ENST00000477485 ATAD5Q96QE3 1844 aa8.4□□□□□ -1.07
RTFDC1-206ENST00000477485 MKI67P46013 3256 aaKnown RBP8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 MYPNQ86TC9 1320 aa8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 PDHXO00330 501 aa8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 ALDH1L1O75891 902 aa8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 NBPF7P0C2Y1 421 aaPredicted RBP8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 HOXD10P28358 340 aa8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 PSMC4P43686 418 aa8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 BCAMP50895 628 aa8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 MTFR1Q15390 333 aa8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 KLHDC4Q8TBB5 520 aa8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 BICC1Q9H694 974 aaKnown RBP8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 TAOK2Q9UL54 1235 aa8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 BRCA2P51587 3418 aa8.39□□□□□ -1.07
RTFDC1-206ENST00000477485 GNRH1P01148 92 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 MYCNP04198 464 aaPredicted RBP8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 IFIT1P09914 478 aaKnown RBP8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 INPP5BP32019 993 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 GRK4P32298 578 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 PRMT2P55345 433 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 HDLBPQ00341 1268 aaKnown RBP8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 PPATQ06203 517 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 FAM83AQ86UY5 434 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 WDR63Q8IWG1 891 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 TRIM47Q96LD4 638 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 ZDHHC15Q96MV8 337 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 HTATIP2Q9BUP3 242 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 RNF208Q9H0X6 261 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 RIPOR2Q9Y4F9 1068 aa8.38□□□□□ -1.07
RTFDC1-206ENST00000477485 ALPK3Q96L96 1907 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 PDE8BO95263 885 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 CCL5P13501 91 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 SLC5A1P13866 664 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 OSBPP22059 807 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 UBXN2AP68543 259 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 PUM3Q15397 648 aaKnown RBP8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 GADL1Q6ZQY3 521 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 FBXO33Q7Z6M2 555 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 ANKRD23Q86SG2 305 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 NKX2-3Q8TAU0 364 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 SHISA4Q96DD7 197 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 ZCCHC17Q9NP64 241 aaKnown RBP8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 SRRDQ9UH36 339 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 PHIPQ8WWQ0 1821 aa8.37□□□□□ -1.07
RTFDC1-206ENST00000477485 RPAP1Q9BWH6 1393 aaPredicted RBP8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 ANP32CO43423 234 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 CYP2C8P10632 490 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 CTGFP29279 349 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 FCGRTP55899 365 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 PRKCZQ05513 592 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 DIXDC1Q155Q3 683 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 APOBEC3HQ6NTF7 200 aaKnown RBP8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 C17orf99Q6UX52 265 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 ZSCAN29Q8IWY8 852 aaPredicted RBP8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 FAM9BQ8IZU0 186 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 WDR66Q8TBY9 1149 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 FAM151AQ8WW52 585 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 KAZALD1Q96I82 304 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 PARK7Q99497 189 aaKnown RBP8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 RBM27Q9P2N5 1060 aaKnown RBP8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 DOCK3Q8IZD9 2030 aa8.36□□□□□ -1.07
RTFDC1-206ENST00000477485 FARP2O94887 1054 aaPredicted RBP8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 LDHBP07195 334 aaKnown RBP8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 FKBP1CQ5VVH2 108 aa8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 HHIPL2Q6UWX4 724 aa8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 ANKRD44Q8N8A2 993 aa8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 SMCR8Q8TEV9 937 aaPredicted RBP8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 SIL1Q9H173 461 aa8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 PICK1Q9NRD5 415 aa8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 USP40Q9NVE5 1235 aa8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 SUGT1Q9Y2Z0 365 aa8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 DAGLAQ9Y4D2 1042 aa8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 NR2E3Q9Y5X4 410 aa8.35□□□□□ -1.07
RTFDC1-206ENST00000477485 TNPO2O14787 897 aaKnown RBP8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 ADCY3O60266 1144 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 EVI5O60447 810 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 GJB1P08034 283 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 ELNP15502 786 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 PRDX5P30044 214 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 GJA8P48165 433 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 NFIAQ12857 509 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 PICALMQ13492 652 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 RABL6Q3YEC7 729 aaPredicted RBP8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 CDC42EP5Q6NZY7 148 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 VGLL2Q8N8G2 317 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 SLAIN1Q8ND83 568 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 U2AF1L4Q8WU68 220 aaKnown RBP8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 LPIN2Q92539 896 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 UNC93B1Q9H1C4 597 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 GNL3LQ9NVN8 582 aaKnown RBP8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 GABRQQ9UN88 632 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 LRRFIP2Q9Y608 721 aaKnown RBP8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 ZHX2Q9Y6X8 837 aa8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 DDX60LQ5H9U9 1706 aaKnown RBP8.34□□□□□ -1.07
RTFDC1-206ENST00000477485 UTYO14607 1347 aa8.33□□□□□ -1.08
RTFDC1-206ENST00000477485 ADGRA2Q96PE1 1338 aa8.33□□□□□ -1.08
RTFDC1-206ENST00000477485 EYA2O00167 538 aa8.33□□□□□ -1.08
RTFDC1-206ENST00000477485 TFRCP02786 760 aaKnown RBP8.33□□□□□ -1.08
RTFDC1-206ENST00000477485 ATP2B3Q16720 1220 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms