RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 TEPSINQ96N21 525 aa15.09■□□□□ 0.01
CLCNKA-205ENST00000477360 LRP2BPQ9P2M1 347 aa15.09■□□□□ 0.01
CLCNKA-205ENST00000477360 PCDHB15Q9Y5E8 787 aa15.09■□□□□ 0.01
CLCNKA-205ENST00000477360 PLCG2P16885 1265 aa15.08■□□□□ 0
CLCNKA-205ENST00000477360 ATP5JP18859 108 aa15.08■□□□□ 0
CLCNKA-205ENST00000477360 PPP4CP60510 307 aa15.08■□□□□ 0
CLCNKA-205ENST00000477360 DIXDC1Q155Q3 683 aa15.08■□□□□ 0
CLCNKA-205ENST00000477360 CDC42EP5Q6NZY7 148 aa15.08■□□□□ 0
CLCNKA-205ENST00000477360 GCC1Q96CN9 775 aa15.08■□□□□ 0
CLCNKA-205ENST00000477360 CRBNQ96SW2 442 aa15.08■□□□□ 0
CLCNKA-205ENST00000477360 IL1RAPL2Q9NP60 686 aa15.08■□□□□ 0
CLCNKA-205ENST00000477360 TLR7Q9NYK1 1049 aaKnown RBP15.08■□□□□ 0
CLCNKA-205ENST00000477360 AOX1Q06278 1338 aa15.08■□□□□ 0
CLCNKA-205ENST00000477360 CA12O43570 354 aa15.07■□□□□ 0
CLCNKA-205ENST00000477360 BAG3O95817 575 aa15.07■□□□□ 0
CLCNKA-205ENST00000477360 PI16Q6UXB8 463 aa15.07■□□□□ 0
CLCNKA-205ENST00000477360 DLK2Q6UY11 383 aa15.07■□□□□ 0
CLCNKA-205ENST00000477360 USP40Q9NVE5 1235 aa15.07■□□□□ 0
CLCNKA-205ENST00000477360 RFX7Q2KHR2 1363 aa15.07■□□□□ 0
CLCNKA-205ENST00000477360 COL2A1P02458 1487 aaPredicted RBP15.07■□□□□ 0
CLCNKA-205ENST00000477360 AKAP11Q9UKA4 1901 aa15.06■□□□□ 0
CLCNKA-205ENST00000477360 FAM155AB1AL88 458 aaPredicted RBP15.06■□□□□ 0
CLCNKA-205ENST00000477360 SLC10A3P09131 477 aa15.06■□□□□ 0
CLCNKA-205ENST00000477360 ZAP70P43403 619 aa15.06■□□□□ 0
CLCNKA-205ENST00000477360 IREB2P48200 963 aaKnown RBP15.06■□□□□ 0
CLCNKA-205ENST00000477360 ZNF157P51786 506 aaPredicted RBP15.06■□□□□ 0
CLCNKA-205ENST00000477360 MAP3K12Q12852 859 aa15.06■□□□□ 0
CLCNKA-205ENST00000477360 DCAF15Q66K64 600 aa15.06■□□□□ 0
CLCNKA-205ENST00000477360 NAA16Q6N069 864 aaPredicted RBP15.06■□□□□ 0
CLCNKA-205ENST00000477360 CYP4F22Q6NT55 531 aa15.06■□□□□ 0
CLCNKA-205ENST00000477360 ZNF384Q8TF68 577 aa15.06■□□□□ 0
CLCNKA-205ENST00000477360 GPATCH3Q96I76 525 aa15.06■□□□□ 0
CLCNKA-205ENST00000477360 WBP1LQ9NX94 342 aa15.06■□□□□ 0
CLCNKA-205ENST00000477360 RAI14Q9P0K7 980 aa15.06■□□□□ 0
CLCNKA-205ENST00000477360 TCP10L2B9ZVM9 353 aa15.05■□□□□ -0
CLCNKA-205ENST00000477360 BTDP43251 543 aa15.05■□□□□ -0
CLCNKA-205ENST00000477360 NBPF12Q5TAG4 269 aaPredicted RBP15.05■□□□□ -0
CLCNKA-205ENST00000477360 TBC1D9Q6ZT07 1266 aa15.05■□□□□ -0
CLCNKA-205ENST00000477360 ANKRD13AQ8IZ07 590 aa15.05■□□□□ -0
CLCNKA-205ENST00000477360 NOL10Q9BSC4 688 aaKnown RBP15.05■□□□□ -0
CLCNKA-205ENST00000477360 SSC5DA1L4H1 1573 aa15.05■□□□□ -0
CLCNKA-205ENST00000477360 ATRNL1Q5VV63 1379 aa15.04■□□□□ -0
CLCNKA-205ENST00000477360 ZBTB48P10074 688 aaPredicted RBP15.04■□□□□ -0
CLCNKA-205ENST00000477360 RHBDL3P58872 404 aa15.04■□□□□ -0
CLCNKA-205ENST00000477360 MAP3K10Q02779 954 aa15.04■□□□□ -0
CLCNKA-205ENST00000477360 TTLL12Q14166 644 aaPredicted RBP15.04■□□□□ -0
CLCNKA-205ENST00000477360 PRAMEF18Q5VWM3 479 aa15.04■□□□□ -0
CLCNKA-205ENST00000477360 TMEM39BQ9GZU3 492 aa15.04■□□□□ -0
CLCNKA-205ENST00000477360 SNRKQ9NRH2 765 aa15.04■□□□□ -0
CLCNKA-205ENST00000477360 ECHDC1Q9NTX5 307 aa15.04■□□□□ -0
CLCNKA-205ENST00000477360 FAM198AQ9UFP1 575 aa15.04■□□□□ -0
CLCNKA-205ENST00000477360 ANGEL1Q9UNK9 670 aaKnown RBP15.04■□□□□ -0
CLCNKA-205ENST00000477360 TTC41PQ6P2S7 1318 aa15.03■□□□□ -0
CLCNKA-205ENST00000477360 USP2O75604 605 aaPredicted RBP15.03■□□□□ -0
CLCNKA-205ENST00000477360 WDHD1O75717 1129 aaPredicted RBP15.03■□□□□ -0
CLCNKA-205ENST00000477360 INHBEP58166 350 aa15.03■□□□□ -0
CLCNKA-205ENST00000477360 PAXIP1Q6ZW49 1069 aaPredicted RBP15.03■□□□□ -0
CLCNKA-205ENST00000477360 TICAM2Q86XR7 235 aa15.03■□□□□ -0
CLCNKA-205ENST00000477360 RASAL3Q86YV0 1011 aa15.03■□□□□ -0
CLCNKA-205ENST00000477360 HAUS7Q99871 368 aa15.03■□□□□ -0
CLCNKA-205ENST00000477360 RWDD1Q9H446 243 aaPredicted RBP15.03■□□□□ -0
CLCNKA-205ENST00000477360 TAOK2Q9UL54 1235 aa15.03■□□□□ -0
CLCNKA-205ENST00000477360 SCAF8Q9UPN6 1271 aaKnown RBP15.03■□□□□ -0
CLCNKA-205ENST00000477360 MAST2Q6P0Q8 1798 aa15.03■□□□□ -0
CLCNKA-205ENST00000477360 UBE2Q2LH0YL09 131 aa15.02■□□□□ -0
CLCNKA-205ENST00000477360 APBB1O00213 710 aa15.02■□□□□ -0
CLCNKA-205ENST00000477360 NFIAQ12857 509 aa15.02■□□□□ -0
CLCNKA-205ENST00000477360 AIDAQ96BJ3 306 aa15.02■□□□□ -0
CLCNKA-205ENST00000477360 BEGAINQ9BUH8 593 aa15.02■□□□□ -0
CLCNKA-205ENST00000477360 PIH1D3Q9NQM4 214 aaKnown RBP15.02■□□□□ -0
CLCNKA-205ENST00000477360 SAGE1Q9NXZ1 904 aa15.02■□□□□ -0
CLCNKA-205ENST00000477360 MYH2Q9UKX2 1941 aa15.02□□□□□ -0.01
CLCNKA-205ENST00000477360 TBC1D12O60347 775 aa15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 HSPA1AP0DMV8 641 aaKnown RBP15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 HSPA1BP0DMV9 641 aaKnown RBP15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 RGS3P49796 1198 aa15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 CACNB3P54284 484 aa15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 MAP3K9P80192 1104 aa15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 SMC5Q8IY18 1101 aa15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 SLC10A4Q96EP9 437 aa15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 ZNF341Q9BYN7 854 aa15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 DHX36Q9H2U1 1008 aaKnown RBP15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 PAG1Q9NWQ8 432 aa15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 ZBTB47Q9UFB7 747 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 ZNF112Q9UJU3 913 aa15.01□□□□□ -0.01
CLCNKA-205ENST00000477360 ERC2O15083 957 aa15□□□□□ -0.01
CLCNKA-205ENST00000477360 IDH1O75874 414 aaKnown RBP15□□□□□ -0.01
CLCNKA-205ENST00000477360 TM4SF4P48230 202 aa15□□□□□ -0.01
CLCNKA-205ENST00000477360 SREBF2Q12772 1141 aa15□□□□□ -0.01
CLCNKA-205ENST00000477360 ERICH6BQ5W0A0 696 aa15□□□□□ -0.01
CLCNKA-205ENST00000477360 SPRYD7Q5W111 196 aa15□□□□□ -0.01
CLCNKA-205ENST00000477360 ZSCAN25Q6NSZ9 544 aa15□□□□□ -0.01
CLCNKA-205ENST00000477360 EXOC6Q8TAG9 804 aa15□□□□□ -0.01
CLCNKA-205ENST00000477360 MANSC4A6NHS7 340 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-205ENST00000477360 NEFLP07196 543 aa14.99□□□□□ -0.01
CLCNKA-205ENST00000477360 CYP7A1P22680 504 aa14.99□□□□□ -0.01
CLCNKA-205ENST00000477360 CTCFP49711 727 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-205ENST00000477360 UBE3CQ15386 1083 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms