RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 SNRKQ9NRH2 765 aa16.43■□□□□ 0.22
ACTN4-205ENST00000477174 USP40Q9NVE5 1235 aa16.43■□□□□ 0.22
ACTN4-205ENST00000477174 RAI14Q9P0K7 980 aa16.43■□□□□ 0.22
ACTN4-205ENST00000477174 ARAP2Q8WZ64 1704 aa16.42■□□□□ 0.22
ACTN4-205ENST00000477174 GPR75-ASB3A0A0A6YYF3 556 aa16.42■□□□□ 0.22
ACTN4-205ENST00000477174 CYP2E1P05181 493 aaPredicted RBP16.42■□□□□ 0.22
ACTN4-205ENST00000477174 HSPA1AP0DMV8 641 aaKnown RBP16.42■□□□□ 0.22
ACTN4-205ENST00000477174 HSPA1BP0DMV9 641 aaKnown RBP16.42■□□□□ 0.22
ACTN4-205ENST00000477174 CACNB3P54284 484 aa16.42■□□□□ 0.22
ACTN4-205ENST00000477174 NSUN4Q96CB9 384 aaKnown RBP16.42■□□□□ 0.22
ACTN4-205ENST00000477174 HOOK2Q96ED9 719 aa16.42■□□□□ 0.22
ACTN4-205ENST00000477174 LRRCC1Q9C099 1032 aa16.42■□□□□ 0.22
ACTN4-205ENST00000477174 TMEM39BQ9GZU3 492 aa16.42■□□□□ 0.22
ACTN4-205ENST00000477174 ANGEL1Q9UNK9 670 aaKnown RBP16.42■□□□□ 0.22
ACTN4-205ENST00000477174 PCDHB15Q9Y5E8 787 aa16.42■□□□□ 0.22
ACTN4-205ENST00000477174 AOC2O75106 756 aa16.41■□□□□ 0.22
ACTN4-205ENST00000477174 USP2O75604 605 aaPredicted RBP16.41■□□□□ 0.22
ACTN4-205ENST00000477174 MAP4K4O95819 1239 aaPredicted RBP16.41■□□□□ 0.22
ACTN4-205ENST00000477174 SLC10A3P09131 477 aa16.41■□□□□ 0.22
ACTN4-205ENST00000477174 ZAP70P43403 619 aa16.41■□□□□ 0.22
ACTN4-205ENST00000477174 PRKG1Q13976 671 aa16.41■□□□□ 0.22
ACTN4-205ENST00000477174 FAM151AQ8WW52 585 aa16.41■□□□□ 0.22
ACTN4-205ENST00000477174 CRBNQ96SW2 442 aa16.41■□□□□ 0.22
ACTN4-205ENST00000477174 IREB2P48200 963 aaKnown RBP16.4■□□□□ 0.22
ACTN4-205ENST00000477174 TMED8Q6PL24 325 aaPredicted RBP16.4■□□□□ 0.22
ACTN4-205ENST00000477174 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
ACTN4-205ENST00000477174 ZNF384Q8TF68 577 aa16.4■□□□□ 0.22
ACTN4-205ENST00000477174 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.4■□□□□ 0.22
ACTN4-205ENST00000477174 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
ACTN4-205ENST00000477174 BEGAINQ9BUH8 593 aa16.4■□□□□ 0.22
ACTN4-205ENST00000477174 IDI2Q9BXS1 227 aa16.4■□□□□ 0.22
ACTN4-205ENST00000477174 MROH7-TTC4A0A0A0MT08 1334 aa16.4■□□□□ 0.22
ACTN4-205ENST00000477174 PAPPA2Q9BXP8 1791 aa16.39■□□□□ 0.21
ACTN4-205ENST00000477174 BTDP43251 543 aa16.39■□□□□ 0.21
ACTN4-205ENST00000477174 SLC10A4Q96EP9 437 aa16.39■□□□□ 0.21
ACTN4-205ENST00000477174 ENTPD3O75355 529 aa16.38■□□□□ 0.21
ACTN4-205ENST00000477174 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
ACTN4-205ENST00000477174 KIF23Q02241 960 aaPredicted RBP16.38■□□□□ 0.21
ACTN4-205ENST00000477174 NFIAQ12857 509 aa16.38■□□□□ 0.21
ACTN4-205ENST00000477174 NAA16Q6N069 864 aaPredicted RBP16.38■□□□□ 0.21
ACTN4-205ENST00000477174 RASAL3Q86YV0 1011 aa16.38■□□□□ 0.21
ACTN4-205ENST00000477174 ZIC5Q96T25 663 aa16.38■□□□□ 0.21
ACTN4-205ENST00000477174 PIH1D3Q9NQM4 214 aaKnown RBP16.38■□□□□ 0.21
ACTN4-205ENST00000477174 FAM198AQ9UFP1 575 aa16.38■□□□□ 0.21
ACTN4-205ENST00000477174 CA12O43570 354 aa16.37■□□□□ 0.21
ACTN4-205ENST00000477174 BAG3O95817 575 aa16.37■□□□□ 0.21
ACTN4-205ENST00000477174 PPP4CP60510 307 aa16.37■□□□□ 0.21
ACTN4-205ENST00000477174 TCP10Q12799 353 aa16.37■□□□□ 0.21
ACTN4-205ENST00000477174 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
ACTN4-205ENST00000477174 CDAN1Q8IWY9 1227 aa16.37■□□□□ 0.21
ACTN4-205ENST00000477174 ANKRD13AQ8IZ07 590 aa16.37■□□□□ 0.21
ACTN4-205ENST00000477174 NOL10Q9BSC4 688 aaKnown RBP16.37■□□□□ 0.21
ACTN4-205ENST00000477174 FZD1Q9UP38 647 aa16.37■□□□□ 0.21
ACTN4-205ENST00000477174 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
ACTN4-205ENST00000477174 MYH13Q9UKX3 1938 aa16.37■□□□□ 0.21
ACTN4-205ENST00000477174 SSC5DA1L4H1 1573 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 FOXN1O15353 648 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 WDHD1O75717 1129 aaPredicted RBP16.36■□□□□ 0.21
ACTN4-205ENST00000477174 PLCG2P16885 1265 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 ATP5JP18859 108 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 CTCFP49711 727 aaPredicted RBP16.36■□□□□ 0.21
ACTN4-205ENST00000477174 RGS3P49796 1198 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 RHBDL3P58872 404 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 MAP3K9P80192 1104 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 MAP3K12Q12852 859 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 DCAF15Q66K64 600 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 CSRNP1Q96S65 589 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 BCL11AQ9H165 835 aa16.36■□□□□ 0.21
ACTN4-205ENST00000477174 RPAP1Q9BWH6 1393 aaPredicted RBP16.36■□□□□ 0.21
ACTN4-205ENST00000477174 ECM29Q5VYK3 1845 aa16.35■□□□□ 0.21
ACTN4-205ENST00000477174 SMARCA5O60264 1052 aaPredicted RBP16.35■□□□□ 0.21
ACTN4-205ENST00000477174 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
ACTN4-205ENST00000477174 HDAC1Q13547 482 aaPredicted RBP16.35■□□□□ 0.21
ACTN4-205ENST00000477174 SPRYD7Q5W111 196 aa16.35■□□□□ 0.21
ACTN4-205ENST00000477174 ANTXR1Q9H6X2 564 aa16.35■□□□□ 0.21
ACTN4-205ENST00000477174 ZBTB48P10074 688 aaPredicted RBP16.34■□□□□ 0.21
ACTN4-205ENST00000477174 CERS3Q8IU89 383 aa16.34■□□□□ 0.21
ACTN4-205ENST00000477174 ZFPM1Q8IX07 1006 aa16.34■□□□□ 0.21
ACTN4-205ENST00000477174 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.34■□□□□ 0.21
ACTN4-205ENST00000477174 CLMNQ96JQ2 1002 aa16.34■□□□□ 0.21
ACTN4-205ENST00000477174 NDUFB9Q9Y6M9 179 aa16.34■□□□□ 0.21
ACTN4-205ENST00000477174 CYP7A1P22680 504 aa16.33■□□□□ 0.2
ACTN4-205ENST00000477174 TM4SF4P48230 202 aa16.33■□□□□ 0.2
ACTN4-205ENST00000477174 INHBEP58166 350 aa16.33■□□□□ 0.2
ACTN4-205ENST00000477174 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.33■□□□□ 0.2
ACTN4-205ENST00000477174 MIGA2Q7L4E1 593 aa16.33■□□□□ 0.2
ACTN4-205ENST00000477174 HAUS7Q99871 368 aa16.33■□□□□ 0.2
ACTN4-205ENST00000477174 ZNF341Q9BYN7 854 aa16.33■□□□□ 0.2
ACTN4-205ENST00000477174 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
ACTN4-205ENST00000477174 DDX4Q9NQI0 724 aaKnown RBP16.33■□□□□ 0.2
ACTN4-205ENST00000477174 ECHDC1Q9NTX5 307 aa16.33■□□□□ 0.2
ACTN4-205ENST00000477174 CSADQ9Y600 493 aa16.33■□□□□ 0.2
ACTN4-205ENST00000477174 GOLIM4O00461 696 aa16.32■□□□□ 0.2
ACTN4-205ENST00000477174 MAP3K10Q02779 954 aa16.32■□□□□ 0.2
ACTN4-205ENST00000477174 RFX7Q2KHR2 1363 aa16.32■□□□□ 0.2
ACTN4-205ENST00000477174 ADGRA1Q86SQ6 560 aa16.32■□□□□ 0.2
ACTN4-205ENST00000477174 ZSCAN29Q8IWY8 852 aaPredicted RBP16.32■□□□□ 0.2
ACTN4-205ENST00000477174 TEX11Q8IYF3 940 aa16.32■□□□□ 0.2
ACTN4-205ENST00000477174 MAGEB6Q8N7X4 407 aa16.32■□□□□ 0.2
ACTN4-205ENST00000477174 GCC1Q96CN9 775 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms