RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 PHKA1P46020 1223 aa21.21■□□□□ 0.99
SMARCD3-210ENST00000477169 CACNB3P54284 484 aa21.21■□□□□ 0.99
SMARCD3-210ENST00000477169 TIMM10P62072 90 aa21.21■□□□□ 0.99
SMARCD3-210ENST00000477169 G3BP1Q13283 466 aaKnown RBP eCLIP21.21■□□□□ 0.99
SMARCD3-210ENST00000477169 AAMPQ13685 434 aa21.21■□□□□ 0.99
SMARCD3-210ENST00000477169 CTU1Q7Z7A3 348 aaKnown RBP21.21■□□□□ 0.99
SMARCD3-210ENST00000477169 CDAN1Q8IWY9 1227 aa21.21■□□□□ 0.99
SMARCD3-210ENST00000477169 AKAP2Q9Y2D5 859 aa21.21■□□□□ 0.99
SMARCD3-210ENST00000477169 SALL1Q9NSC2 1324 aa21.21■□□□□ 0.99
SMARCD3-210ENST00000477169 GPR25O00155 361 aa21.2■□□□□ 0.98
SMARCD3-210ENST00000477169 CCDC102BQ68D86 513 aa21.2■□□□□ 0.98
SMARCD3-210ENST00000477169 IFNL1Q8IU54 200 aa21.2■□□□□ 0.98
SMARCD3-210ENST00000477169 ZNF296Q8WUU4 475 aaPredicted RBP21.2■□□□□ 0.98
SMARCD3-210ENST00000477169 LDHBP07195 334 aaKnown RBP21.19■□□□□ 0.98
SMARCD3-210ENST00000477169 PRDX5P30044 214 aa21.19■□□□□ 0.98
SMARCD3-210ENST00000477169 ADORA1P30542 326 aa21.19■□□□□ 0.98
SMARCD3-210ENST00000477169 MAP3K9P80192 1104 aa21.19■□□□□ 0.98
SMARCD3-210ENST00000477169 TFCP2Q12800 502 aa21.19■□□□□ 0.98
SMARCD3-210ENST00000477169 HOOK2Q96ED9 719 aa21.19■□□□□ 0.98
SMARCD3-210ENST00000477169 A0A1B0GUL7 405 aa21.18■□□□□ 0.98
SMARCD3-210ENST00000477169 GJA5P36382 358 aa21.18■□□□□ 0.98
SMARCD3-210ENST00000477169 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.18■□□□□ 0.98
SMARCD3-210ENST00000477169 ZGPATQ8N5A5 531 aaKnown RBP21.18■□□□□ 0.98
SMARCD3-210ENST00000477169 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.18■□□□□ 0.98
SMARCD3-210ENST00000477169 ELP3Q9H9T3 547 aa21.18■□□□□ 0.98
SMARCD3-210ENST00000477169 DAGLAQ9Y4D2 1042 aa21.18■□□□□ 0.98
SMARCD3-210ENST00000477169 LAMB1P07942 1786 aa21.18■□□□□ 0.98
SMARCD3-210ENST00000477169 DIXDC1Q155Q3 683 aa21.17■□□□□ 0.98
SMARCD3-210ENST00000477169 OTUD7BQ6GQQ9 843 aa21.17■□□□□ 0.98
SMARCD3-210ENST00000477169 OPTNQ96CV9 577 aa21.17■□□□□ 0.98
SMARCD3-210ENST00000477169 XAGE2Q96GT9 111 aa21.17■□□□□ 0.98
SMARCD3-210ENST00000477169 EXOC6BQ9Y2D4 811 aa21.17■□□□□ 0.98
SMARCD3-210ENST00000477169 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.17■□□□□ 0.98
SMARCD3-210ENST00000477169 PDS5AQ29RF7 1337 aaKnown RBP21.16■□□□□ 0.98
SMARCD3-210ENST00000477169 TESPA1A2RU30 521 aaPredicted RBP21.16■□□□□ 0.98
SMARCD3-210ENST00000477169 IGF2BP3O00425 579 aaKnown RBP eCLIP21.16■□□□□ 0.98
SMARCD3-210ENST00000477169 RGS19P49795 217 aa21.16■□□□□ 0.98
SMARCD3-210ENST00000477169 OS9Q13438 667 aaPredicted RBP21.16■□□□□ 0.98
SMARCD3-210ENST00000477169 PKN2Q16513 984 aaKnown RBP21.16■□□□□ 0.98
SMARCD3-210ENST00000477169 FAM151AQ8WW52 585 aa21.16■□□□□ 0.98
SMARCD3-210ENST00000477169 R3HDMLQ9H3Y0 253 aa21.16■□□□□ 0.98
SMARCD3-210ENST00000477169 CSADQ9Y600 493 aa21.16■□□□□ 0.98
SMARCD3-210ENST00000477169 RPAP1Q9BWH6 1393 aaPredicted RBP21.15■□□□□ 0.98
SMARCD3-210ENST00000477169 FKTNO75072 461 aa21.15■□□□□ 0.98
SMARCD3-210ENST00000477169 RASGRF1Q13972 1273 aa21.15■□□□□ 0.98
SMARCD3-210ENST00000477169 VGLL4Q14135 290 aa21.15■□□□□ 0.98
SMARCD3-210ENST00000477169 CDC42EP5Q6NZY7 148 aa21.15■□□□□ 0.98
SMARCD3-210ENST00000477169 OTOFQ9HC10 1997 aa21.15■□□□□ 0.98
SMARCD3-210ENST00000477169 HSP90AB4PQ58FF6 505 aa21.14■□□□□ 0.97
SMARCD3-210ENST00000477169 DCAF15Q66K64 600 aa21.14■□□□□ 0.97
SMARCD3-210ENST00000477169 NEUROD6Q96NK8 337 aa21.14■□□□□ 0.97
SMARCD3-210ENST00000477169 SPTY2D1Q68D10 685 aaPredicted RBP21.13■□□□□ 0.97
SMARCD3-210ENST00000477169 MS4A4AQ96JQ5 239 aa21.13■□□□□ 0.97
SMARCD3-210ENST00000477169 PTPN18Q99952 460 aa21.13■□□□□ 0.97
SMARCD3-210ENST00000477169 USP40Q9NVE5 1235 aa21.13■□□□□ 0.97
SMARCD3-210ENST00000477169 GTF2A2P52657 109 aa21.12■□□□□ 0.97
SMARCD3-210ENST00000477169 ERC1Q8IUD2 1116 aa21.12■□□□□ 0.97
SMARCD3-210ENST00000477169 SLF2Q8IX21 1173 aa21.12■□□□□ 0.97
SMARCD3-210ENST00000477169 FAM163AQ96GL9 167 aaPredicted RBP21.12■□□□□ 0.97
SMARCD3-210ENST00000477169 WRNIP1Q96S55 665 aa21.12■□□□□ 0.97
SMARCD3-210ENST00000477169 DCTPP1Q9H773 170 aa21.12■□□□□ 0.97
SMARCD3-210ENST00000477169 ABCF2Q9UG63 623 aa21.12■□□□□ 0.97
SMARCD3-210ENST00000477169 SPDYE5A6NIY4 337 aa21.11■□□□□ 0.97
SMARCD3-210ENST00000477169 RAB11FIP3O75154 756 aa21.11■□□□□ 0.97
SMARCD3-210ENST00000477169 NFIAQ12857 509 aa21.11■□□□□ 0.97
SMARCD3-210ENST00000477169 GORABQ5T7V8 394 aa21.11■□□□□ 0.97
SMARCD3-210ENST00000477169 DZIP1Q86YF9 867 aaKnown RBP21.11■□□□□ 0.97
SMARCD3-210ENST00000477169 CNKSR2Q8WXI2 1034 aa21.11■□□□□ 0.97
SMARCD3-210ENST00000477169 ZNF341Q9BYN7 854 aa21.11■□□□□ 0.97
SMARCD3-210ENST00000477169 GPR108Q9NPR9 543 aa21.11■□□□□ 0.97
SMARCD3-210ENST00000477169 SNCAIPQ9Y6H5 919 aa21.11■□□□□ 0.97
SMARCD3-210ENST00000477169 GAKO14976 1311 aa21.1■□□□□ 0.97
SMARCD3-210ENST00000477169 TCP10Q12799 353 aa21.1■□□□□ 0.97
SMARCD3-210ENST00000477169 HDAC1Q13547 482 aaPredicted RBP21.1■□□□□ 0.97
SMARCD3-210ENST00000477169 MIGA2Q7L4E1 593 aa21.1■□□□□ 0.97
SMARCD3-210ENST00000477169 ERO1BQ86YB8 467 aa21.1■□□□□ 0.97
SMARCD3-210ENST00000477169 RHPN1Q8TCX5 695 aa21.1■□□□□ 0.97
SMARCD3-210ENST00000477169 ZKSCAN4Q969J2 545 aaPredicted RBP21.1■□□□□ 0.97
SMARCD3-210ENST00000477169 OTUD5Q96G74 571 aa21.1■□□□□ 0.97
SMARCD3-210ENST00000477169 FAM198AQ9UFP1 575 aa21.1■□□□□ 0.97
SMARCD3-210ENST00000477169 MYH2Q9UKX2 1941 aa21.1■□□□□ 0.97
SMARCD3-210ENST00000477169 APBB1O00213 710 aa21.09■□□□□ 0.97
SMARCD3-210ENST00000477169 MLLT1Q03111 559 aaPredicted RBP21.09■□□□□ 0.97
SMARCD3-210ENST00000477169 TNNI3KQ59H18 835 aa21.09■□□□□ 0.97
SMARCD3-210ENST00000477169 ERICH6Q7L0X2 663 aa21.09■□□□□ 0.97
SMARCD3-210ENST00000477169 KIF1BPQ96EK5 621 aa21.09■□□□□ 0.97
SMARCD3-210ENST00000477169 IDI2Q9BXS1 227 aa21.09■□□□□ 0.97
SMARCD3-210ENST00000477169 HMG20BQ9P0W2 317 aa21.09■□□□□ 0.97
SMARCD3-210ENST00000477169 HPS5Q9UPZ3 1129 aa21.09■□□□□ 0.97
SMARCD3-210ENST00000477169 FPGT-TNNI3KV9GXZ4 949 aa21.09■□□□□ 0.97
SMARCD3-210ENST00000477169 CCL15-CCL14A0A0B4J2E2 113 aa21.08■□□□□ 0.97
SMARCD3-210ENST00000477169 ARID4AP29374 1257 aaPredicted RBP21.08■□□□□ 0.97
SMARCD3-210ENST00000477169 CRHR2Q13324 411 aa21.08■□□□□ 0.97
SMARCD3-210ENST00000477169 CCL15Q16663 113 aa21.08■□□□□ 0.97
SMARCD3-210ENST00000477169 FBXO46Q6PJ61 603 aaPredicted RBP21.08■□□□□ 0.97
SMARCD3-210ENST00000477169 SPATA5Q8NB90 893 aa21.08■□□□□ 0.97
SMARCD3-210ENST00000477169 BRI3BPQ8WY22 251 aa21.08■□□□□ 0.97
SMARCD3-210ENST00000477169 ZNF112Q9UJU3 913 aa21.08■□□□□ 0.97
SMARCD3-210ENST00000477169 ENTPD3O75355 529 aa21.07■□□□□ 0.96
SMARCD3-210ENST00000477169 IL1RAPL2Q9NP60 686 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms