RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 MRS2Q9HD23 443 aa5.6□□□□□ -1.51
NPHP3-207ENST00000476742 TMEM39AQ9NV64 488 aa5.6□□□□□ -1.51
NPHP3-207ENST00000476742 PARP2Q9UGN5 583 aa5.6□□□□□ -1.51
NPHP3-207ENST00000476742 PPM1HQ9ULR3 514 aa5.6□□□□□ -1.51
NPHP3-207ENST00000476742 AK5Q9Y6K8 562 aa5.6□□□□□ -1.51
NPHP3-207ENST00000476742 WISP1O95388 367 aa5.59□□□□□ -1.51
NPHP3-207ENST00000476742 USP17L7P0C7H9 530 aa5.59□□□□□ -1.51
NPHP3-207ENST00000476742 GLB1P16278 677 aa5.59□□□□□ -1.51
NPHP3-207ENST00000476742 SPINK2P20155 84 aa5.59□□□□□ -1.51
NPHP3-207ENST00000476742 NOS3P29474 1203 aa5.59□□□□□ -1.51
NPHP3-207ENST00000476742 ZNF157P51786 506 aaPredicted RBP5.59□□□□□ -1.51
NPHP3-207ENST00000476742 DAB2P98082 770 aa5.59□□□□□ -1.51
NPHP3-207ENST00000476742 POU4F3Q15319 338 aa5.59□□□□□ -1.51
NPHP3-207ENST00000476742 AGGF1Q8N302 714 aaeCLIP5.59□□□□□ -1.51
NPHP3-207ENST00000476742 RUSC1Q9BVN2 902 aa5.59□□□□□ -1.51
NPHP3-207ENST00000476742 CEP41Q9BYV8 373 aa5.59□□□□□ -1.51
NPHP3-207ENST00000476742 RNF208Q9H0X6 261 aa5.59□□□□□ -1.51
NPHP3-207ENST00000476742 SART1O43290 800 aaKnown RBP5.58□□□□□ -1.52
NPHP3-207ENST00000476742 SORBS3O60504 671 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 ALX3O95076 343 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 MAOBP27338 520 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 FAAP100Q0VG06 881 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 EXOSC6Q5RKV6 272 aaKnown RBP5.58□□□□□ -1.52
NPHP3-207ENST00000476742 NUTM2GQ5VZR2 741 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 FDX2Q6P4F2 183 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 KIAA1211Q6ZU35 1233 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 TMC4Q7Z404 712 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 C3orf58Q8NDZ4 430 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 GIPC2Q8TF65 315 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 CYP4F12Q9HCS2 524 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 TTF2Q9UNY4 1162 aaKnown RBP5.58□□□□□ -1.52
NPHP3-207ENST00000476742 SAMM50Q9Y512 469 aa5.58□□□□□ -1.52
NPHP3-207ENST00000476742 LOC100289279A0A1B0GTE1 492 aa5.57□□□□□ -1.52
NPHP3-207ENST00000476742 MEGF11A6BM72 1044 aa5.57□□□□□ -1.52
NPHP3-207ENST00000476742 ANKRD34AQ69YU3 496 aa5.57□□□□□ -1.52
NPHP3-207ENST00000476742 TPTE2Q6XPS3 522 aa5.57□□□□□ -1.52
NPHP3-207ENST00000476742 ANKRD24Q8TF21 1146 aa5.57□□□□□ -1.52
NPHP3-207ENST00000476742 CCDC9Q9Y3X0 531 aaKnown RBP5.57□□□□□ -1.52
NPHP3-207ENST00000476742 NME2P22392 152 aa5.56□□□□□ -1.52
NPHP3-207ENST00000476742 TAGLNQ01995 201 aaKnown RBP5.56□□□□□ -1.52
NPHP3-207ENST00000476742 PDE3AQ14432 1141 aa5.56□□□□□ -1.52
NPHP3-207ENST00000476742 DZIP1LQ8IYY4 767 aaKnown RBP5.56□□□□□ -1.52
NPHP3-207ENST00000476742 NECAB3Q96P71 396 aaPredicted RBP5.56□□□□□ -1.52
NPHP3-207ENST00000476742 TRIM56Q9BRZ2 755 aaKnown RBP5.56□□□□□ -1.52
NPHP3-207ENST00000476742 EMILIN2Q9BXX0 1053 aa5.56□□□□□ -1.52
NPHP3-207ENST00000476742 RAD18Q9NS91 495 aa5.56□□□□□ -1.52
NPHP3-207ENST00000476742 RNF19AQ9NV58 838 aa5.56□□□□□ -1.52
NPHP3-207ENST00000476742 VTI1BQ9UEU0 232 aa5.56□□□□□ -1.52
NPHP3-207ENST00000476742 Q6ZS46 218 aa5.55□□□□□ -1.52
NPHP3-207ENST00000476742 SULF2Q8IWU5 870 aa5.55□□□□□ -1.52
NPHP3-207ENST00000476742 C12orf50Q8NA57 414 aaPredicted RBP5.55□□□□□ -1.52
NPHP3-207ENST00000476742 SMG8Q8ND04 991 aaKnown RBP5.55□□□□□ -1.52
NPHP3-207ENST00000476742 MEGF10Q96KG7 1140 aa5.55□□□□□ -1.52
NPHP3-207ENST00000476742 FAM161BQ96MY7 647 aa5.55□□□□□ -1.52
NPHP3-207ENST00000476742 TMPRSS13Q9BYE2 586 aa5.55□□□□□ -1.52
NPHP3-207ENST00000476742 NRSN2Q9GZP1 204 aa5.55□□□□□ -1.52
NPHP3-207ENST00000476742 SUGCTQ9HAC7 445 aa5.55□□□□□ -1.52
NPHP3-207ENST00000476742 CBX8Q9HC52 389 aa5.55□□□□□ -1.52
NPHP3-207ENST00000476742 GAS2O43903 313 aaKnown RBP5.54□□□□□ -1.52
NPHP3-207ENST00000476742 FBXO24O75426 580 aa5.54□□□□□ -1.52
NPHP3-207ENST00000476742 WNT11O96014 354 aa5.54□□□□□ -1.52
NPHP3-207ENST00000476742 GSTP1P09211 210 aaKnown RBP5.54□□□□□ -1.52
NPHP3-207ENST00000476742 ARNTP27540 789 aa5.54□□□□□ -1.52
NPHP3-207ENST00000476742 LRRC14Q15048 493 aa5.54□□□□□ -1.52
NPHP3-207ENST00000476742 CCDC85BQ15834 202 aaPredicted RBP5.54□□□□□ -1.52
NPHP3-207ENST00000476742 UVSSAQ2YD98 709 aa5.54□□□□□ -1.52
NPHP3-207ENST00000476742 SV2BQ7L1I2 683 aa5.54□□□□□ -1.52
NPHP3-207ENST00000476742 KCNB2Q92953 911 aa5.54□□□□□ -1.52
NPHP3-207ENST00000476742 UTP4Q969X6 686 aaKnown RBP5.54□□□□□ -1.52
NPHP3-207ENST00000476742 ENC1O14682 589 aa5.53□□□□□ -1.52
NPHP3-207ENST00000476742 DLGAP3O95886 979 aa5.53□□□□□ -1.52
NPHP3-207ENST00000476742 SLFN14P0C7P3 912 aa5.53□□□□□ -1.52
NPHP3-207ENST00000476742 ZNF16P17020 682 aaPredicted RBP5.53□□□□□ -1.52
NPHP3-207ENST00000476742 TAF1CQ15572 869 aaPredicted RBP5.53□□□□□ -1.52
NPHP3-207ENST00000476742 ZNF124Q15973 351 aa5.53□□□□□ -1.52
NPHP3-207ENST00000476742 CRELD1Q96HD1 420 aa5.53□□□□□ -1.52
NPHP3-207ENST00000476742 UBL7Q96S82 380 aaPredicted RBP5.53□□□□□ -1.52
NPHP3-207ENST00000476742 ZC3H12CQ9C0D7 883 aaKnown RBP5.53□□□□□ -1.52
NPHP3-207ENST00000476742 KRT82Q9NSB4 513 aa5.53□□□□□ -1.52
NPHP3-207ENST00000476742 DHX15O43143 795 aaKnown RBP5.52□□□□□ -1.53
NPHP3-207ENST00000476742 ECEL1O95672 775 aa5.52□□□□□ -1.53
NPHP3-207ENST00000476742 TGFB1P01137 390 aa5.52□□□□□ -1.53
NPHP3-207ENST00000476742 CTSBP07858 339 aa5.52□□□□□ -1.53
NPHP3-207ENST00000476742 LMNB1P20700 586 aa5.52□□□□□ -1.53
NPHP3-207ENST00000476742 ST13P50502 369 aaKnown RBP5.52□□□□□ -1.53
NPHP3-207ENST00000476742 USP11P51784 963 aa5.52□□□□□ -1.53
NPHP3-207ENST00000476742 SOX4Q06945 474 aaPredicted RBP5.52□□□□□ -1.53
NPHP3-207ENST00000476742 DTX1Q86Y01 620 aa5.52□□□□□ -1.53
NPHP3-207ENST00000476742 FAM46AQ96IP4 442 aaKnown RBP5.52□□□□□ -1.53
NPHP3-207ENST00000476742 CYP8B1Q9UNU6 501 aa5.52□□□□□ -1.53
NPHP3-207ENST00000476742 HIF3AQ9Y2N7 669 aa5.52□□□□□ -1.53
NPHP3-207ENST00000476742 SYNGAP1Q96PV0 1343 aa5.51□□□□□ -1.53
NPHP3-207ENST00000476742 RBM47A0AV96 593 aaKnown RBP5.51□□□□□ -1.53
NPHP3-207ENST00000476742 AOC2O75106 756 aa5.51□□□□□ -1.53
NPHP3-207ENST00000476742 CELA3AP09093 270 aa5.51□□□□□ -1.53
NPHP3-207ENST00000476742 RLBP1P12271 317 aa5.51□□□□□ -1.53
NPHP3-207ENST00000476742 PREPP48147 710 aa5.51□□□□□ -1.53
NPHP3-207ENST00000476742 AKAP4Q5JQC9 854 aa5.51□□□□□ -1.53
NPHP3-207ENST00000476742 ZNF648Q5T619 568 aaPredicted RBP5.51□□□□□ -1.53
NPHP3-207ENST00000476742 MEI1Q5TIA1 1274 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms