RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
CLDN4-205ENST00000476494 MYO1BO43795 1136 aa8.38□□□□□ -1.07
CLDN4-205ENST00000476494 NHLH1Q02575 133 aa8.38□□□□□ -1.07
CLDN4-205ENST00000476494 AIMP1Q12904 312 aaKnown RBP8.38□□□□□ -1.07
CLDN4-205ENST00000476494 LHX8Q68G74 356 aa8.38□□□□□ -1.07
CLDN4-205ENST00000476494 HMX1Q9NP08 348 aaPredicted RBP8.38□□□□□ -1.07
CLDN4-205ENST00000476494 ZNF70Q9UC06 446 aaPredicted RBP8.38□□□□□ -1.07
CLDN4-205ENST00000476494 AK9Q5TCS8 1911 aa8.38□□□□□ -1.07
CLDN4-205ENST00000476494 HMGCRP04035 888 aa8.37□□□□□ -1.07
CLDN4-205ENST00000476494 U2AF1L5P0DN76 240 aaPredicted RBP8.37□□□□□ -1.07
CLDN4-205ENST00000476494 EIF2S2P20042 333 aaKnown RBP8.37□□□□□ -1.07
CLDN4-205ENST00000476494 U2AF1Q01081 240 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLDN4-205ENST00000476494 CNGB1Q14028 1251 aaPredicted RBP8.37□□□□□ -1.07
CLDN4-205ENST00000476494 LBHD1Q9BQE6 289 aaPredicted RBP8.37□□□□□ -1.07
CLDN4-205ENST00000476494 CD209Q9NNX6 404 aa8.37□□□□□ -1.07
CLDN4-205ENST00000476494 BSDC1Q9NW68 430 aaPredicted RBP8.37□□□□□ -1.07
CLDN4-205ENST00000476494 CACNA1GO43497 2377 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 CACNA1BQ00975 2339 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 TNPO2O14787 897 aaKnown RBP8.36□□□□□ -1.07
CLDN4-205ENST00000476494 FKBP1AP62942 108 aaKnown RBP8.36□□□□□ -1.07
CLDN4-205ENST00000476494 TNFAIP1Q13829 316 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 ADGRE1Q14246 886 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 PDE3AQ14432 1141 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 ANKRD18AQ8IVF6 992 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 ZBTB38Q8NAP3 1195 aaPredicted RBP8.36□□□□□ -1.07
CLDN4-205ENST00000476494 PLBD2Q8NHP8 589 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 CFAP53Q96M91 514 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 PARK7Q99497 189 aaKnown RBP8.36□□□□□ -1.07
CLDN4-205ENST00000476494 ZNF576Q9H609 170 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 TDRD3Q9H7E2 651 aaKnown RBP8.36□□□□□ -1.07
CLDN4-205ENST00000476494 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
CLDN4-205ENST00000476494 RLFQ13129 1914 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 DCHS1Q96JQ0 3298 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 ZNF318Q5VUA4 2279 aa8.36□□□□□ -1.07
CLDN4-205ENST00000476494 FAM86C2PA6NEL3 165 aa8.35□□□□□ -1.07
CLDN4-205ENST00000476494 F8W031 263 aaPredicted RBP8.35□□□□□ -1.07
CLDN4-205ENST00000476494 SMIM22K7EJ46 135 aa8.35□□□□□ -1.07
CLDN4-205ENST00000476494 FOXK2Q01167 660 aa8.35□□□□□ -1.07
CLDN4-205ENST00000476494 CCDC152Q4G0S7 254 aa8.35□□□□□ -1.07
CLDN4-205ENST00000476494 PPM1EQ8WY54 764 aa8.35□□□□□ -1.07
CLDN4-205ENST00000476494 WRNIP1Q96S55 665 aa8.35□□□□□ -1.07
CLDN4-205ENST00000476494 LEMD3Q9Y2U8 911 aa8.35□□□□□ -1.07
CLDN4-205ENST00000476494 SPEF2Q9C093 1822 aa8.35□□□□□ -1.07
CLDN4-205ENST00000476494 SPTBN4Q9H254 2564 aa8.35□□□□□ -1.07
CLDN4-205ENST00000476494 PTPRFP10586 1907 aa8.35□□□□□ -1.07
CLDN4-205ENST00000476494 FRMPD3Q5JV73 1810 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 C5orf42Q9H799 3197 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 TCP10L2B9ZVM9 353 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 PI4K2BG5E9Z4 385 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 PDE8AO60658 829 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 DNAJB2P25686 324 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 INPP5BP32019 993 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 EPHB4P54760 987 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 TFF2Q03403 129 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 RIC3Q7Z5B4 369 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 TRIB2Q92519 343 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 CCDC85AQ96PX6 553 aaPredicted RBP8.34□□□□□ -1.07
CLDN4-205ENST00000476494 ZNF112Q9UJU3 913 aa8.34□□□□□ -1.07
CLDN4-205ENST00000476494 CENPBP07199 599 aaPredicted RBP8.33□□□□□ -1.08
CLDN4-205ENST00000476494 IL1R1P14778 569 aa8.33□□□□□ -1.08
CLDN4-205ENST00000476494 KCNQ1P51787 676 aa8.33□□□□□ -1.08
CLDN4-205ENST00000476494 CCDC184Q52MB2 194 aa8.33□□□□□ -1.08
CLDN4-205ENST00000476494 C15orf52Q6ZUT6 534 aaKnown RBP8.33□□□□□ -1.08
CLDN4-205ENST00000476494 DZIP1LQ8IYY4 767 aaKnown RBP8.33□□□□□ -1.08
CLDN4-205ENST00000476494 BADQ92934 168 aa8.33□□□□□ -1.08
CLDN4-205ENST00000476494 COA7Q96BR5 231 aa8.33□□□□□ -1.08
CLDN4-205ENST00000476494 SLC45A1Q9Y2W3 748 aa8.33□□□□□ -1.08
CLDN4-205ENST00000476494 PLXNA1Q9UIW2 1896 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 TRIM43BA6NCK2 446 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 SNAP23O00161 211 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 CXCL11O14625 94 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 TLL1O43897 1013 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 ITGB8P26012 769 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 WDR43Q15061 677 aaKnown RBP eCLIP8.32□□□□□ -1.08
CLDN4-205ENST00000476494 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
CLDN4-205ENST00000476494 FAM9BQ8IZU0 186 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 TTLL11Q8NHH1 800 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 TRIM43Q96BQ3 446 aaPredicted RBP8.32□□□□□ -1.08
CLDN4-205ENST00000476494 FBXL18Q96ME1 805 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 SENP6Q9GZR1 1112 aaPredicted RBP8.32□□□□□ -1.08
CLDN4-205ENST00000476494 CD320Q9NPF0 282 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 SERPINA10Q9UK55 444 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 TAOK2Q9UL54 1235 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 NUDCQ9Y266 331 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 DAGLAQ9Y4D2 1042 aa8.32□□□□□ -1.08
CLDN4-205ENST00000476494 PRRC2BQ5JSZ5 2229 aaKnown RBP8.31□□□□□ -1.08
CLDN4-205ENST00000476494 A0A0G2JLL6 359 aaPredicted RBP8.31□□□□□ -1.08
CLDN4-205ENST00000476494 PRR33A8MZF0 331 aa8.31□□□□□ -1.08
CLDN4-205ENST00000476494 PCCAP05165 728 aaPredicted RBP8.31□□□□□ -1.08
CLDN4-205ENST00000476494 PRKAR2AP13861 404 aaKnown RBP8.31□□□□□ -1.08
CLDN4-205ENST00000476494 RTP1P59025 263 aa8.31□□□□□ -1.08
CLDN4-205ENST00000476494 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
CLDN4-205ENST00000476494 PRRT2Q7Z6L0 340 aaPredicted RBP8.31□□□□□ -1.08
CLDN4-205ENST00000476494 JARID2Q92833 1246 aaPredicted RBP8.31□□□□□ -1.08
CLDN4-205ENST00000476494 PHOX2BQ99453 314 aa8.31□□□□□ -1.08
CLDN4-205ENST00000476494 PRDM12Q9H4Q4 367 aa8.31□□□□□ -1.08
CLDN4-205ENST00000476494 MYH3P11055 1940 aa8.31□□□□□ -1.08
CLDN4-205ENST00000476494 PTPRZ1P23471 2315 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-205ENST00000476494 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-205ENST00000476494 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms