RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 RFX7Q2KHR2 1363 aa16.38■□□□□ 0.21
MRPL55-228ENST00000476267 IRF6O14896 467 aa16.38■□□□□ 0.21
MRPL55-228ENST00000476267 UBTFL1P0CB47 393 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-228ENST00000476267 PPIL2Q13356 520 aa16.38■□□□□ 0.21
MRPL55-228ENST00000476267 DIXDC1Q155Q3 683 aa16.38■□□□□ 0.21
MRPL55-228ENST00000476267 FAM151AQ8WW52 585 aa16.38■□□□□ 0.21
MRPL55-228ENST00000476267 HOOK2Q96ED9 719 aa16.38■□□□□ 0.21
MRPL55-228ENST00000476267 ZFYVE28Q9HCC9 887 aa16.38■□□□□ 0.21
MRPL55-228ENST00000476267 ZNF112Q9UJU3 913 aa16.38■□□□□ 0.21
MRPL55-228ENST00000476267 NOB1Q9ULX3 412 aaKnown RBP16.38■□□□□ 0.21
MRPL55-228ENST00000476267 ATRNL1Q5VV63 1379 aa16.38■□□□□ 0.21
MRPL55-228ENST00000476267 BTBD19C9JJ37 291 aa16.37■□□□□ 0.21
MRPL55-228ENST00000476267 NFIAQ12857 509 aa16.37■□□□□ 0.21
MRPL55-228ENST00000476267 ATP2B3Q16720 1220 aa16.37■□□□□ 0.21
MRPL55-228ENST00000476267 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
MRPL55-228ENST00000476267 SIL1Q9H173 461 aa16.37■□□□□ 0.21
MRPL55-228ENST00000476267 COPRSQ9NQ92 184 aa16.37■□□□□ 0.21
MRPL55-228ENST00000476267 FAM198AQ9UFP1 575 aa16.37■□□□□ 0.21
MRPL55-228ENST00000476267 LRRFIP2Q9Y608 721 aaKnown RBP16.37■□□□□ 0.21
MRPL55-228ENST00000476267 TLR2O60603 784 aa16.36■□□□□ 0.21
MRPL55-228ENST00000476267 CETPP11597 493 aa16.36■□□□□ 0.21
MRPL55-228ENST00000476267 INPP5BP32019 993 aa16.36■□□□□ 0.21
MRPL55-228ENST00000476267 IL15P40933 162 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-228ENST00000476267 PHKA1P46020 1223 aa16.36■□□□□ 0.21
MRPL55-228ENST00000476267 PPATQ06203 517 aa16.36■□□□□ 0.21
MRPL55-228ENST00000476267 DCAF15Q66K64 600 aa16.36■□□□□ 0.21
MRPL55-228ENST00000476267 MIGA2Q7L4E1 593 aa16.36■□□□□ 0.21
MRPL55-228ENST00000476267 ZNF333Q96JL9 665 aa16.36■□□□□ 0.21
MRPL55-228ENST00000476267 ZNF341Q9BYN7 854 aa16.36■□□□□ 0.21
MRPL55-228ENST00000476267 PA2G4Q9UQ80 394 aaKnown RBP16.36■□□□□ 0.21
MRPL55-228ENST00000476267 MYH2Q9UKX2 1941 aa16.36■□□□□ 0.21
MRPL55-228ENST00000476267 SEMA3EO15041 775 aa16.35■□□□□ 0.21
MRPL55-228ENST00000476267 SNAPC2Q13487 334 aa16.35■□□□□ 0.21
MRPL55-228ENST00000476267 MOGSQ13724 837 aa16.35■□□□□ 0.21
MRPL55-228ENST00000476267 MEIS3Q99687 375 aa16.35■□□□□ 0.21
MRPL55-228ENST00000476267 API5Q9BZZ5 524 aaKnown RBP16.35■□□□□ 0.21
MRPL55-228ENST00000476267 ARHGAP39Q9C0H5 1083 aa16.35■□□□□ 0.21
MRPL55-228ENST00000476267 CEP126Q9P2H0 1117 aa16.35■□□□□ 0.21
MRPL55-228ENST00000476267 KCNH4Q9UQ05 1017 aa16.35■□□□□ 0.21
MRPL55-228ENST00000476267 PTCH2Q9Y6C5 1203 aa16.35■□□□□ 0.21
MRPL55-228ENST00000476267 ADGRA2Q96PE1 1338 aa16.35■□□□□ 0.21
MRPL55-228ENST00000476267 PHIPQ8WWQ0 1821 aa16.34■□□□□ 0.21
MRPL55-228ENST00000476267 ADORA1P30542 326 aa16.34■□□□□ 0.21
MRPL55-228ENST00000476267 NOL9Q5SY16 702 aaKnown RBP16.34■□□□□ 0.21
MRPL55-228ENST00000476267 DENND2AQ9ULE3 1009 aa16.34■□□□□ 0.21
MRPL55-228ENST00000476267 GAKO14976 1311 aa16.34■□□□□ 0.21
MRPL55-228ENST00000476267 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
MRPL55-228ENST00000476267 LDHBP07195 334 aaKnown RBP16.33■□□□□ 0.2
MRPL55-228ENST00000476267 RARSP54136 660 aaKnown RBP16.33■□□□□ 0.2
MRPL55-228ENST00000476267 LACTBP83111 547 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-228ENST00000476267 TCP10Q12799 353 aa16.33■□□□□ 0.2
MRPL55-228ENST00000476267 MTX1Q13505 466 aa16.33■□□□□ 0.2
MRPL55-228ENST00000476267 CCDC102BQ68D86 513 aa16.33■□□□□ 0.2
MRPL55-228ENST00000476267 C17orf99Q6UX52 265 aa16.33■□□□□ 0.2
MRPL55-228ENST00000476267 ZFPM1Q8IX07 1006 aa16.33■□□□□ 0.2
MRPL55-228ENST00000476267 ARHGAP45Q92619 1136 aa16.33■□□□□ 0.2
MRPL55-228ENST00000476267 IDI2Q9BXS1 227 aa16.33■□□□□ 0.2
MRPL55-228ENST00000476267 PTPRFP10586 1907 aa16.32■□□□□ 0.2
MRPL55-228ENST00000476267 EN2P19622 333 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-228ENST00000476267 CTGFP29279 349 aa16.32■□□□□ 0.2
MRPL55-228ENST00000476267 DOCK1Q14185 1865 aa16.32■□□□□ 0.2
MRPL55-228ENST00000476267 ANKRD23Q86SG2 305 aa16.32■□□□□ 0.2
MRPL55-228ENST00000476267 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-228ENST00000476267 GNL3LQ9NVN8 582 aaKnown RBP16.32■□□□□ 0.2
MRPL55-228ENST00000476267 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-228ENST00000476267 AK9Q5TCS8 1911 aa16.31■□□□□ 0.2
MRPL55-228ENST00000476267 PHF20L1A8MW92 1017 aa16.31■□□□□ 0.2
MRPL55-228ENST00000476267 MAP3K10Q02779 954 aa16.31■□□□□ 0.2
MRPL55-228ENST00000476267 RASGRF1Q13972 1273 aa16.31■□□□□ 0.2
MRPL55-228ENST00000476267 ARHGEF6Q15052 776 aa16.31■□□□□ 0.2
MRPL55-228ENST00000476267 SH3BP5LQ7L8J4 393 aa16.31■□□□□ 0.2
MRPL55-228ENST00000476267 USP40Q9NVE5 1235 aa16.31■□□□□ 0.2
MRPL55-228ENST00000476267 PCDH10Q9P2E7 1040 aa16.31■□□□□ 0.2
MRPL55-228ENST00000476267 ENTPD3O75355 529 aa16.3■□□□□ 0.2
MRPL55-228ENST00000476267 GNRH1P01148 92 aa16.3■□□□□ 0.2
MRPL55-228ENST00000476267 TIMM10P62072 90 aa16.3■□□□□ 0.2
MRPL55-228ENST00000476267 SLC9C1Q4G0N8 1177 aa16.3■□□□□ 0.2
MRPL55-228ENST00000476267 ZNF384Q8TF68 577 aa16.3■□□□□ 0.2
MRPL55-228ENST00000476267 FAM163AQ96GL9 167 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-228ENST00000476267 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
MRPL55-228ENST00000476267 MGAMO43451 1857 aa16.3■□□□□ 0.2
MRPL55-228ENST00000476267 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
MRPL55-228ENST00000476267 PDHXO00330 501 aa16.29■□□□□ 0.2
MRPL55-228ENST00000476267 RGS3P49796 1198 aa16.29■□□□□ 0.2
MRPL55-228ENST00000476267 ZGPATQ8N5A5 531 aaKnown RBP16.29■□□□□ 0.2
MRPL55-228ENST00000476267 A0A1B0GUL7 405 aa16.28■□□□□ 0.2
MRPL55-228ENST00000476267 WDHD1O75717 1129 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-228ENST00000476267 GPAT2Q6NUI2 795 aa16.28■□□□□ 0.2
MRPL55-228ENST00000476267 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
MRPL55-228ENST00000476267 XAGE2Q96GT9 111 aa16.28■□□□□ 0.2
MRPL55-228ENST00000476267 DDX4Q9NQI0 724 aaKnown RBP16.28■□□□□ 0.2
MRPL55-228ENST00000476267 CPA4Q9UI42 421 aa16.28■□□□□ 0.2
MRPL55-228ENST00000476267 MROH7-TTC4A0A0A0MT08 1334 aa16.27■□□□□ 0.2
MRPL55-228ENST00000476267 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.2
MRPL55-228ENST00000476267 SRGAP3O43295 1099 aa16.27■□□□□ 0.2
MRPL55-228ENST00000476267 GNAI3P08754 354 aa16.27■□□□□ 0.2
MRPL55-228ENST00000476267 SLURP2P0DP57 97 aa16.27■□□□□ 0.2
MRPL55-228ENST00000476267 PRMT2P55345 433 aa16.27■□□□□ 0.2
MRPL55-228ENST00000476267 TFCP2Q12800 502 aa16.27■□□□□ 0.2
MRPL55-228ENST00000476267 SCYL3Q8IZE3 742 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms