RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 LDHAL6AQ6ZMR3 332 aa17.72■□□□□ 0.43
FAM3A-218ENST00000475657 FAM84BQ96KN1 310 aaPredicted RBP17.72■□□□□ 0.43
FAM3A-218ENST00000475657 PARK7Q99497 189 aaKnown RBP17.72■□□□□ 0.43
FAM3A-218ENST00000475657 ZNF341Q9BYN7 854 aa17.72■□□□□ 0.43
FAM3A-218ENST00000475657 CRISPLD2Q9H0B8 497 aa17.72■□□□□ 0.43
FAM3A-218ENST00000475657 RPAP1Q9BWH6 1393 aaPredicted RBP17.71■□□□□ 0.43
FAM3A-218ENST00000475657 TFRCP02786 760 aaKnown RBP17.71■□□□□ 0.43
FAM3A-218ENST00000475657 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
FAM3A-218ENST00000475657 MOGSQ13724 837 aa17.71■□□□□ 0.43
FAM3A-218ENST00000475657 TBC1D22AQ8WUA7 517 aa17.71■□□□□ 0.43
FAM3A-218ENST00000475657 DNAAF4Q8WXU2 420 aa17.71■□□□□ 0.43
FAM3A-218ENST00000475657 TEKT1Q969V4 418 aa17.71■□□□□ 0.43
FAM3A-218ENST00000475657 ZDHHC15Q96MV8 337 aa17.71■□□□□ 0.43
FAM3A-218ENST00000475657 PAK6Q9NQU5 681 aaPredicted RBP17.71■□□□□ 0.43
FAM3A-218ENST00000475657 TMOD2Q9NZR1 351 aa17.71■□□□□ 0.43
FAM3A-218ENST00000475657 PLIN1O60240 522 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 ADCY3O60266 1144 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 GYG1P46976 350 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 IRF5Q13568 498 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 CCDC57Q2TAC2 916 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 CCDC184Q52MB2 194 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 CNNM1Q9NRU3 951 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 MTMR10Q9NXD2 777 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 ZNF112Q9UJU3 913 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 A0A1B0GUL6 1792 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 UNC80Q8N2C7 3258 aa17.7■□□□□ 0.42
FAM3A-218ENST00000475657 INPP5BP32019 993 aa17.69■□□□□ 0.42
FAM3A-218ENST00000475657 CACNB3P54284 484 aa17.69■□□□□ 0.42
FAM3A-218ENST00000475657 FLIIQ13045 1269 aa17.69■□□□□ 0.42
FAM3A-218ENST00000475657 NECAB2Q7Z6G3 386 aa17.69■□□□□ 0.42
FAM3A-218ENST00000475657 DEFB118Q96PH6 123 aa17.69■□□□□ 0.42
FAM3A-218ENST00000475657 COL25A1Q9BXS0 654 aaPredicted RBP17.69■□□□□ 0.42
FAM3A-218ENST00000475657 GABRQQ9UN88 632 aa17.69■□□□□ 0.42
FAM3A-218ENST00000475657 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
FAM3A-218ENST00000475657 CXCL11O14625 94 aa17.68■□□□□ 0.42
FAM3A-218ENST00000475657 INHAP05111 366 aa17.68■□□□□ 0.42
FAM3A-218ENST00000475657 FLT3LGP49771 235 aa17.68■□□□□ 0.42
FAM3A-218ENST00000475657 GRIK5Q16478 980 aa17.68■□□□□ 0.42
FAM3A-218ENST00000475657 TAF7LQ5H9L4 462 aa17.68■□□□□ 0.42
FAM3A-218ENST00000475657 APOBEC3HQ6NTF7 200 aaKnown RBP17.68■□□□□ 0.42
FAM3A-218ENST00000475657 LMBR1LQ6UX01 489 aa17.68■□□□□ 0.42
FAM3A-218ENST00000475657 PAWRQ96IZ0 340 aaKnown RBP17.68■□□□□ 0.42
FAM3A-218ENST00000475657 NOL9Q5SY16 702 aaKnown RBP17.67■□□□□ 0.42
FAM3A-218ENST00000475657 GPAT2Q6NUI2 795 aa17.67■□□□□ 0.42
FAM3A-218ENST00000475657 FBXO33Q7Z6M2 555 aa17.67■□□□□ 0.42
FAM3A-218ENST00000475657 ANKLE1Q8NAG6 615 aa17.67■□□□□ 0.42
FAM3A-218ENST00000475657 ZNF594Q96JF6 807 aaPredicted RBP17.67■□□□□ 0.42
FAM3A-218ENST00000475657 SUGT1Q9Y2Z0 365 aa17.67■□□□□ 0.42
FAM3A-218ENST00000475657 ELNP15502 786 aa17.66■□□□□ 0.42
FAM3A-218ENST00000475657 FKBP5Q13451 457 aaPredicted RBP17.66■□□□□ 0.42
FAM3A-218ENST00000475657 TWISTNBQ3B726 338 aaPredicted RBP17.66■□□□□ 0.42
FAM3A-218ENST00000475657 Q7L0L9 218 aa17.66■□□□□ 0.42
FAM3A-218ENST00000475657 MIGA2Q7L4E1 593 aa17.66■□□□□ 0.42
FAM3A-218ENST00000475657 CYP2C8P10632 490 aa17.65■□□□□ 0.42
FAM3A-218ENST00000475657 HHIPL2Q6UWX4 724 aa17.65■□□□□ 0.42
FAM3A-218ENST00000475657 TDHQ8IZJ6 230 aa17.65■□□□□ 0.42
FAM3A-218ENST00000475657 FAM151AQ8WW52 585 aa17.65■□□□□ 0.42
FAM3A-218ENST00000475657 SLC45A1Q9Y2W3 748 aa17.65■□□□□ 0.42
FAM3A-218ENST00000475657 MAST3O60307 1309 aa17.65■□□□□ 0.42
FAM3A-218ENST00000475657 BCAMP50895 628 aa17.64■□□□□ 0.41
FAM3A-218ENST00000475657 EPHA10Q5JZY3 1008 aa17.64■□□□□ 0.41
FAM3A-218ENST00000475657 FASTKD5Q7L8L6 764 aaKnown RBP17.64■□□□□ 0.41
FAM3A-218ENST00000475657 VPS37DQ86XT2 251 aa17.64■□□□□ 0.41
FAM3A-218ENST00000475657 TNPO2O14787 897 aaKnown RBP17.63■□□□□ 0.41
FAM3A-218ENST00000475657 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.63■□□□□ 0.41
FAM3A-218ENST00000475657 TSR2Q969E8 191 aaKnown RBP17.63■□□□□ 0.41
FAM3A-218ENST00000475657 CHAF1AQ13111 956 aaPredicted RBP17.62■□□□□ 0.41
FAM3A-218ENST00000475657 CAVIN4Q5BKX8 364 aa17.62■□□□□ 0.41
FAM3A-218ENST00000475657 BEND3Q5T5X7 828 aa17.62■□□□□ 0.41
FAM3A-218ENST00000475657 C7orf61Q8IZ16 206 aa17.62■□□□□ 0.41
FAM3A-218ENST00000475657 MIER1Q8N108 512 aa17.62■□□□□ 0.41
FAM3A-218ENST00000475657 DIS3LQ8TF46 1054 aaKnown RBP17.62■□□□□ 0.41
FAM3A-218ENST00000475657 NBPF3Q9H094 633 aa17.62■□□□□ 0.41
FAM3A-218ENST00000475657 ZMYND8Q9ULU4 1186 aaPredicted RBP17.62■□□□□ 0.41
FAM3A-218ENST00000475657 MROH5Q6ZUA9 1318 aa17.62■□□□□ 0.41
FAM3A-218ENST00000475657 MGAMO43451 1857 aa17.61■□□□□ 0.41
FAM3A-218ENST00000475657 A0A0G2JLL6 359 aaPredicted RBP17.61■□□□□ 0.41
FAM3A-218ENST00000475657 FRAT2O75474 233 aaPredicted RBP17.61■□□□□ 0.41
FAM3A-218ENST00000475657 MAGEA10P43363 369 aaPredicted RBP17.61■□□□□ 0.41
FAM3A-218ENST00000475657 PRRT2Q7Z6L0 340 aaPredicted RBP17.61■□□□□ 0.41
FAM3A-218ENST00000475657 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.61■□□□□ 0.41
FAM3A-218ENST00000475657 IQSEC3Q9UPP2 1182 aaPredicted RBP17.61■□□□□ 0.41
FAM3A-218ENST00000475657 CCER2I3L3R5 266 aa17.6■□□□□ 0.41
FAM3A-218ENST00000475657 GRM8O00222 908 aa17.6■□□□□ 0.41
FAM3A-218ENST00000475657 FAM109BQ6ICB4 259 aaPredicted RBP17.6■□□□□ 0.41
FAM3A-218ENST00000475657 COA7Q96BR5 231 aa17.6■□□□□ 0.41
FAM3A-218ENST00000475657 PUS3Q9BZE2 481 aaKnown RBP17.6■□□□□ 0.41
FAM3A-218ENST00000475657 ALPK3Q96L96 1907 aa17.6■□□□□ 0.41
FAM3A-218ENST00000475657 UBE2OQ9C0C9 1292 aaKnown RBP17.59■□□□□ 0.41
FAM3A-218ENST00000475657 SALL2Q9Y467 1007 aaPredicted RBP17.59■□□□□ 0.41
FAM3A-218ENST00000475657 VCANP13611 3396 aa17.58■□□□□ 0.41
FAM3A-218ENST00000475657 CCDC27Q2M243 656 aa17.58■□□□□ 0.4
FAM3A-218ENST00000475657 AFG3L2Q9Y4W6 797 aa17.58■□□□□ 0.4
FAM3A-218ENST00000475657 ZHX2Q9Y6X8 837 aa17.58■□□□□ 0.4
FAM3A-218ENST00000475657 TTC28Q96AY4 2481 aa17.58■□□□□ 0.4
FAM3A-218ENST00000475657 RPTORQ8N122 1335 aa17.57■□□□□ 0.4
FAM3A-218ENST00000475657 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
FAM3A-218ENST00000475657 POTEB2H3BUK9 544 aa17.57■□□□□ 0.4
FAM3A-218ENST00000475657 HMGCRP04035 888 aa17.57■□□□□ 0.4
FAM3A-218ENST00000475657 SCYL3Q8IZE3 742 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms