RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 TTC39AQ5SRH9 613 aa20.34■□□□□ 0.85
VPS8-222ENST00000475580 SPTY2D1Q68D10 685 aaPredicted RBP20.34■□□□□ 0.85
VPS8-222ENST00000475580 FAM83AQ86UY5 434 aa20.34■□□□□ 0.85
VPS8-222ENST00000475580 RHPN1Q8TCX5 695 aa20.34■□□□□ 0.85
VPS8-222ENST00000475580 FAM163AQ96GL9 167 aaPredicted RBP20.34■□□□□ 0.85
VPS8-222ENST00000475580 PPP1R12BO60237 982 aaPredicted RBP20.33■□□□□ 0.85
VPS8-222ENST00000475580 HMMRO75330 724 aa20.33■□□□□ 0.85
VPS8-222ENST00000475580 RRP1P56182 461 aaKnown RBP20.33■□□□□ 0.85
VPS8-222ENST00000475580 MECOMQ03112 1051 aa20.33■□□□□ 0.85
VPS8-222ENST00000475580 HSP90AB4PQ58FF6 505 aa20.33■□□□□ 0.85
VPS8-222ENST00000475580 CCDC158Q5M9N0 1113 aa20.33■□□□□ 0.85
VPS8-222ENST00000475580 ERICH6Q7L0X2 663 aa20.33■□□□□ 0.85
VPS8-222ENST00000475580 DZIP1Q86YF9 867 aaKnown RBP20.33■□□□□ 0.85
VPS8-222ENST00000475580 TMOD2Q9NZR1 351 aa20.33■□□□□ 0.85
VPS8-222ENST00000475580 RFX7Q2KHR2 1363 aa20.33■□□□□ 0.84
VPS8-222ENST00000475580 RPAP1Q9BWH6 1393 aaPredicted RBP20.33■□□□□ 0.84
VPS8-222ENST00000475580 LBX1P52954 281 aa20.32■□□□□ 0.84
VPS8-222ENST00000475580 NFIAQ12857 509 aa20.32■□□□□ 0.84
VPS8-222ENST00000475580 AACSQ86V21 672 aa20.32■□□□□ 0.84
VPS8-222ENST00000475580 NSUN4Q96CB9 384 aaKnown RBP20.32■□□□□ 0.84
VPS8-222ENST00000475580 CLMNQ96JQ2 1002 aa20.32■□□□□ 0.84
VPS8-222ENST00000475580 CSRNP1Q96S65 589 aa20.32■□□□□ 0.84
VPS8-222ENST00000475580 IL1RAPL2Q9NP60 686 aa20.32■□□□□ 0.84
VPS8-222ENST00000475580 SNRKQ9NRH2 765 aa20.32■□□□□ 0.84
VPS8-222ENST00000475580 MYO5AQ9Y4I1 1855 aaKnown RBP20.32■□□□□ 0.84
VPS8-222ENST00000475580 MROH7-TTC4A0A0A0MT08 1334 aa20.31■□□□□ 0.84
VPS8-222ENST00000475580 BEGAINQ9BUH8 593 aa20.31■□□□□ 0.84
VPS8-222ENST00000475580 PRDM10Q9NQV6 1147 aa20.31■□□□□ 0.84
VPS8-222ENST00000475580 USP40Q9NVE5 1235 aa20.31■□□□□ 0.84
VPS8-222ENST00000475580 FAM198AQ9UFP1 575 aa20.31■□□□□ 0.84
VPS8-222ENST00000475580 MAST2Q6P0Q8 1798 aa20.31■□□□□ 0.84
VPS8-222ENST00000475580 UNCXA6NJT0 531 aa20.3■□□□□ 0.84
VPS8-222ENST00000475580 CYP2E1P05181 493 aaPredicted RBP20.3■□□□□ 0.84
VPS8-222ENST00000475580 IREB2P48200 963 aaKnown RBP20.3■□□□□ 0.84
VPS8-222ENST00000475580 FAM151AQ8WW52 585 aa20.3■□□□□ 0.84
VPS8-222ENST00000475580 KIF1BPQ96EK5 621 aa20.3■□□□□ 0.84
VPS8-222ENST00000475580 TSKSQ9UJT2 592 aa20.3■□□□□ 0.84
VPS8-222ENST00000475580 LAMB1P07942 1786 aa20.29■□□□□ 0.84
VPS8-222ENST00000475580 APBB1O00213 710 aa20.29■□□□□ 0.84
VPS8-222ENST00000475580 RAB11FIP3O75154 756 aa20.29■□□□□ 0.84
VPS8-222ENST00000475580 BTDP43251 543 aa20.29■□□□□ 0.84
VPS8-222ENST00000475580 ZAP70P43403 619 aa20.29■□□□□ 0.84
VPS8-222ENST00000475580 SPRYD7Q5W111 196 aa20.29■□□□□ 0.84
VPS8-222ENST00000475580 SLF2Q8IX21 1173 aa20.29■□□□□ 0.84
VPS8-222ENST00000475580 GPR75-ASB3A0A0A6YYF3 556 aa20.28■□□□□ 0.84
VPS8-222ENST00000475580 CA12O43570 354 aa20.28■□□□□ 0.84
VPS8-222ENST00000475580 RHBDL3P58872 404 aa20.28■□□□□ 0.84
VPS8-222ENST00000475580 TCP10Q12799 353 aa20.28■□□□□ 0.84
VPS8-222ENST00000475580 MKRN3Q13064 507 aaKnown RBP20.28■□□□□ 0.84
VPS8-222ENST00000475580 ZFPM1Q8IX07 1006 aa20.28■□□□□ 0.84
VPS8-222ENST00000475580 IDI2Q9BXS1 227 aa20.28■□□□□ 0.84
VPS8-222ENST00000475580 PIH1D3Q9NQM4 214 aaKnown RBP20.28■□□□□ 0.84
VPS8-222ENST00000475580 RAI14Q9P0K7 980 aa20.28■□□□□ 0.84
VPS8-222ENST00000475580 WDHD1O75717 1129 aaPredicted RBP20.27■□□□□ 0.84
VPS8-222ENST00000475580 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.27■□□□□ 0.84
VPS8-222ENST00000475580 ANKRD13AQ8IZ07 590 aa20.27■□□□□ 0.84
VPS8-222ENST00000475580 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.27■□□□□ 0.84
VPS8-222ENST00000475580 SLC10A4Q96EP9 437 aa20.27■□□□□ 0.84
VPS8-222ENST00000475580 LRP2BPQ9P2M1 347 aa20.27■□□□□ 0.84
VPS8-222ENST00000475580 GJA5P36382 358 aa20.26■□□□□ 0.83
VPS8-222ENST00000475580 RGS3P49796 1198 aa20.26■□□□□ 0.83
VPS8-222ENST00000475580 GSTO1P78417 241 aa20.26■□□□□ 0.83
VPS8-222ENST00000475580 REM2Q8IYK8 340 aaPredicted RBP20.26■□□□□ 0.83
VPS8-222ENST00000475580 CLASRPQ8N2M8 674 aaKnown RBP20.26■□□□□ 0.83
VPS8-222ENST00000475580 WNK4Q96J92 1243 aa20.26■□□□□ 0.83
VPS8-222ENST00000475580 DDX4Q9NQI0 724 aaKnown RBP20.26■□□□□ 0.83
VPS8-222ENST00000475580 RNF186Q9NXI6 227 aa20.26■□□□□ 0.83
VPS8-222ENST00000475580 NDUFB9Q9Y6M9 179 aa20.26■□□□□ 0.83
VPS8-222ENST00000475580 DOCK2Q92608 1830 aa20.25■□□□□ 0.83
VPS8-222ENST00000475580 ATRNL1Q5VV63 1379 aa20.25■□□□□ 0.83
VPS8-222ENST00000475580 LDHCP07864 332 aa20.25■□□□□ 0.83
VPS8-222ENST00000475580 MAP3K9P80192 1104 aa20.25■□□□□ 0.83
VPS8-222ENST00000475580 SH3BP5LQ7L8J4 393 aa20.25■□□□□ 0.83
VPS8-222ENST00000475580 SAGE1Q9NXZ1 904 aa20.25■□□□□ 0.83
VPS8-222ENST00000475580 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.25■□□□□ 0.83
VPS8-222ENST00000475580 AK9Q5TCS8 1911 aa20.24■□□□□ 0.83
VPS8-222ENST00000475580 ENTPD3O75355 529 aa20.24■□□□□ 0.83
VPS8-222ENST00000475580 ZBTB48P10074 688 aaPredicted RBP20.24■□□□□ 0.83
VPS8-222ENST00000475580 TM4SF4P48230 202 aa20.24■□□□□ 0.83
VPS8-222ENST00000475580 VGLL4Q14135 290 aa20.24■□□□□ 0.83
VPS8-222ENST00000475580 ADGRA1Q86SQ6 560 aa20.24■□□□□ 0.83
VPS8-222ENST00000475580 ANTXR1Q9H6X2 564 aa20.24■□□□□ 0.83
VPS8-222ENST00000475580 ELP3Q9H9T3 547 aa20.24■□□□□ 0.83
VPS8-222ENST00000475580 PCDHB15Q9Y5E8 787 aa20.24■□□□□ 0.83
VPS8-222ENST00000475580 TRPA1O75762 1119 aa20.23■□□□□ 0.83
VPS8-222ENST00000475580 MIGA2Q7L4E1 593 aa20.23■□□□□ 0.83
VPS8-222ENST00000475580 HOOK2Q96ED9 719 aa20.23■□□□□ 0.83
VPS8-222ENST00000475580 CRBNQ96SW2 442 aa20.23■□□□□ 0.83
VPS8-222ENST00000475580 DCTPP1Q9H773 170 aa20.23■□□□□ 0.83
VPS8-222ENST00000475580 IFIT2P09913 472 aaKnown RBP20.22■□□□□ 0.83
VPS8-222ENST00000475580 DCAF15Q66K64 600 aa20.22■□□□□ 0.83
VPS8-222ENST00000475580 NAA16Q6N069 864 aaPredicted RBP20.22■□□□□ 0.83
VPS8-222ENST00000475580 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
VPS8-222ENST00000475580 SNCAIPQ9Y6H5 919 aa20.22■□□□□ 0.83
VPS8-222ENST00000475580 CDK5RAP2Q96SN8 1893 aa20.22■□□□□ 0.83
VPS8-222ENST00000475580 CASP8AP2Q9UKL3 1982 aa20.21■□□□□ 0.83
VPS8-222ENST00000475580 DDTLA6NHG4 134 aaPredicted RBP20.21■□□□□ 0.83
VPS8-222ENST00000475580 IGSF3O75054 1194 aa20.21■□□□□ 0.83
VPS8-222ENST00000475580 NPM3O75607 178 aaKnown RBP20.21■□□□□ 0.83
VPS8-222ENST00000475580 MAP4K4O95819 1239 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms