RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 CACNB3P54284 484 aa13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 DNTTIP2Q5QJE6 756 aaKnown RBP13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 STRBPQ96SI9 672 aaKnown RBP13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 BTAF1O14981 1849 aa13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 NEDD4P46934 1319 aa13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 MAP7D2Q96T17 732 aa13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 PARP3Q9Y6F1 533 aa13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 NUP188Q5SRE5 1749 aa13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 MAGEB6P1A0A0J9YX57 407 aa13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 PSDA5PKW4 1024 aaPredicted RBP13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 DHX32Q7L7V1 743 aaKnown RBP13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 POLLQ9UGP5 575 aa13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 TACC3Q9Y6A5 838 aa13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 USP17L12C9JPN9 530 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 USP17L21D6R901 530 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 CPLX1O14810 134 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 POLR3DP05423 398 aaPredicted RBP13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 SF3B2Q13435 895 aaKnown RBP13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 MAPKAPK5Q8IW41 473 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 SLC44A5Q8NCS7 719 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 ZNF384Q8TF68 577 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 DYNLL2Q96FJ2 89 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 WDR33Q9C0J8 1336 aaKnown RBP13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 POLRMTO00411 1230 aaKnown RBP13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 RBM5P52756 815 aaKnown RBP eCLIP13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 GRAPQ13588 217 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 TTF1Q15361 905 aaPredicted RBP13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 GRAPLQ8TC17 118 aaPredicted RBP13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 PAPPAQ13219 1627 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 TCHHQ07283 1943 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 IFIT3O14879 490 aaKnown RBP13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 ARID4AP29374 1257 aaPredicted RBP13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 RBSNQ9H1K0 784 aa13.41□□□□□ -0.26
KCNIP3-206ENST00000475491 USP17L8P0C7I0 530 aa13.4□□□□□ -0.26
KCNIP3-206ENST00000475491 CUL4AQ13619 759 aa13.4□□□□□ -0.26
KCNIP3-206ENST00000475491 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
KCNIP3-206ENST00000475491 NBPF3Q9H094 633 aa13.4□□□□□ -0.26
KCNIP3-206ENST00000475491 GSG1L2A8MUP6 293 aa13.4□□□□□ -0.26
KCNIP3-206ENST00000475491 ZSCAN22P10073 491 aaPredicted RBP13.4□□□□□ -0.26
KCNIP3-206ENST00000475491 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
KCNIP3-206ENST00000475491 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
KCNIP3-206ENST00000475491 R3HCC1Q9Y3T6 440 aaKnown RBP13.4□□□□□ -0.26
KCNIP3-206ENST00000475491 ZSCAN25Q6NSZ9 544 aa13.4□□□□□ -0.27
KCNIP3-206ENST00000475491 TGFBRAP1Q8WUH2 860 aa13.4□□□□□ -0.27
KCNIP3-206ENST00000475491 PLEKHG2Q9H7P9 1386 aa13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 GOLGA6L4A6NEF3 574 aa13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 USP5P45974 858 aa13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 TMEM67Q5HYA8 995 aa13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 ZFYP08048 801 aaPredicted RBP13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 ANTXR2P58335 489 aa13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 MFSD14BQ5SR56 506 aa13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 GIMAP6Q6P9H5 292 aa13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 DSCC1Q9BVC3 393 aa13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 GGA1Q9UJY5 639 aa13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 MYO5AQ9Y4I1 1855 aaKnown RBP13.39□□□□□ -0.27
KCNIP3-206ENST00000475491 C2CD5Q86YS7 1000 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 ZSWIM5Q9P217 1185 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 TCRBV5S4A2TA0A5A2 114 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 FSD2A1L4K1 749 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 PTPDC1A2A3K4 754 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 NCOA7Q8NI08 942 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 C21orf2O43822 256 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 MFSD6Q6ZSS7 791 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 RASGRP2Q7LDG7 609 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 RBM17Q96I25 401 aaKnown RBP13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 CTNNA3Q9UI47 895 aa13.38□□□□□ -0.27
KCNIP3-206ENST00000475491 A0A087WWV3 80 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 F13A1P00488 732 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 TCP10Q12799 353 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 KRT32Q14532 448 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 SPEF2Q9C093 1822 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 ATP2B2Q01814 1243 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 ERCC4Q92889 916 aaPredicted RBP13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 CPVLQ9H3G5 476 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 PNPLA7Q6ZV29 1317 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 MCM5P33992 734 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 SLC27A3Q5K4L6 730 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 SLC10A5Q5PT55 438 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 ZC3H12CQ9C0D7 883 aaKnown RBP13.37□□□□□ -0.27
KCNIP3-206ENST00000475491 PPEF1O14829 653 aaPredicted RBP13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 PDIA3P30101 505 aaKnown RBP13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 CLEC10AQ8IUN9 316 aa13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 INTS4Q96HW7 963 aaKnown RBP13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 PATL2C9JE40 543 aaKnown RBP13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 UBE3CQ15386 1083 aa13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 DPP8Q6V1X1 898 aaPredicted RBP13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 IPO4Q8TEX9 1081 aaKnown RBP13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 NACAP1Q9BZK3 213 aa13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 MTMR6Q9Y217 621 aa13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms