RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 ZKSCAN4Q969J2 545 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-204ENST00000475403 TEPSINQ96N21 525 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 GDF15Q99988 308 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 CHMP3Q9Y3E7 222 aa8.61□□□□□ -1.03
LSAMP-204ENST00000475403 ALPK3Q96L96 1907 aa8.6□□□□□ -1.03
LSAMP-204ENST00000475403 FAM205AQ6ZU69 1335 aa8.6□□□□□ -1.03
LSAMP-204ENST00000475403 MGAMO43451 1857 aa8.6□□□□□ -1.03
LSAMP-204ENST00000475403 ANKRD18BA2A2Z9 1011 aa8.6□□□□□ -1.03
LSAMP-204ENST00000475403 ELL2O00472 640 aaPredicted RBP8.6□□□□□ -1.03
LSAMP-204ENST00000475403 TNPO2O14787 897 aaKnown RBP8.6□□□□□ -1.03
LSAMP-204ENST00000475403 PPATQ06203 517 aa8.6□□□□□ -1.03
LSAMP-204ENST00000475403 DIS3LQ8TF46 1054 aaKnown RBP8.6□□□□□ -1.03
LSAMP-204ENST00000475403 FAM161BQ96MY7 647 aa8.6□□□□□ -1.03
LSAMP-204ENST00000475403 CHMP4AQ9BY43 222 aa8.6□□□□□ -1.03
LSAMP-204ENST00000475403 GABRQQ9UN88 632 aa8.6□□□□□ -1.03
LSAMP-204ENST00000475403 SNAP23O00161 211 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 PLIN1O60240 522 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 CRKP46108 304 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 FLT3LGP49771 235 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 CWF19L2Q2TBE0 894 aaKnown RBP8.59□□□□□ -1.03
LSAMP-204ENST00000475403 TAF7LQ5H9L4 462 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 ZNF697Q5TEC3 545 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 CCDC30Q5VVM6 783 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 C15orf52Q6ZUT6 534 aaKnown RBP8.59□□□□□ -1.03
LSAMP-204ENST00000475403 PXYLP1Q8TE99 480 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 SMCR8Q8TEV9 937 aaPredicted RBP8.59□□□□□ -1.03
LSAMP-204ENST00000475403 ZNF341Q9BYN7 854 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 NBPF3Q9H094 633 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 MBIPQ9NS73 344 aa8.59□□□□□ -1.03
LSAMP-204ENST00000475403 PI4KAP2A4QPH2 592 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 FRAT2O75474 233 aaPredicted RBP8.58□□□□□ -1.04
LSAMP-204ENST00000475403 IGKV5-2P06315 115 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 CYP2C8P10632 490 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 CACNB3P54284 484 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 IFIT5Q13325 482 aaKnown RBP8.58□□□□□ -1.04
LSAMP-204ENST00000475403 NBR1Q14596 966 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 KSR2Q6VAB6 950 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 VPS37DQ86XT2 251 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 PI4KAP1Q8N8J0 262 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 ANKLE1Q8NAG6 615 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 TEKT1Q969V4 418 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 COA7Q96BR5 231 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 STK31Q9BXU1 1019 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.58□□□□□ -1.04
LSAMP-204ENST00000475403 C11orf49Q9H6J7 331 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 MYH16Q9H6N6 1097 aa8.58□□□□□ -1.04
LSAMP-204ENST00000475403 PAK6Q9NQU5 681 aaPredicted RBP8.58□□□□□ -1.04
LSAMP-204ENST00000475403 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
LSAMP-204ENST00000475403 NEURL1BA8MQ27 555 aa8.57□□□□□ -1.04
LSAMP-204ENST00000475403 BCRP11274 1271 aa8.57□□□□□ -1.04
LSAMP-204ENST00000475403 COL9A1P20849 921 aa8.57□□□□□ -1.04
LSAMP-204ENST00000475403 WDR43Q15061 677 aaKnown RBP eCLIP8.57□□□□□ -1.04
LSAMP-204ENST00000475403 MIGA2Q7L4E1 593 aa8.57□□□□□ -1.04
LSAMP-204ENST00000475403 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
LSAMP-204ENST00000475403 GUCD1Q96NT3 240 aa8.57□□□□□ -1.04
LSAMP-204ENST00000475403 CRISPLD2Q9H0B8 497 aa8.57□□□□□ -1.04
LSAMP-204ENST00000475403 TRIM35Q9UPQ4 493 aa8.57□□□□□ -1.04
LSAMP-204ENST00000475403 A0A1B0GUL6 1792 aa8.57□□□□□ -1.04
LSAMP-204ENST00000475403 DDX60LQ5H9U9 1706 aaKnown RBP8.57□□□□□ -1.04
LSAMP-204ENST00000475403 AK9Q5TCS8 1911 aa8.56□□□□□ -1.04
LSAMP-204ENST00000475403 INPP5BP32019 993 aa8.56□□□□□ -1.04
LSAMP-204ENST00000475403 CALD1Q05682 793 aaKnown RBP8.56□□□□□ -1.04
LSAMP-204ENST00000475403 CHAF1AQ13111 956 aaPredicted RBP8.56□□□□□ -1.04
LSAMP-204ENST00000475403 DDX10Q13206 875 aaKnown RBP8.56□□□□□ -1.04
LSAMP-204ENST00000475403 IRF5Q13568 498 aa8.56□□□□□ -1.04
LSAMP-204ENST00000475403 GADL1Q6ZQY3 521 aa8.56□□□□□ -1.04
LSAMP-204ENST00000475403 FAM83AQ86UY5 434 aa8.56□□□□□ -1.04
LSAMP-204ENST00000475403 MAFAQ8NHW3 353 aaPredicted RBP8.56□□□□□ -1.04
LSAMP-204ENST00000475403 RUNDC1Q96C34 613 aa8.56□□□□□ -1.04
LSAMP-204ENST00000475403 PLA2G12BQ9BX93 195 aa8.56□□□□□ -1.04
LSAMP-204ENST00000475403 CNNM1Q9NRU3 951 aa8.56□□□□□ -1.04
LSAMP-204ENST00000475403 KCNH4Q9UQ05 1017 aa8.56□□□□□ -1.04
LSAMP-204ENST00000475403 RPAP1Q9BWH6 1393 aaPredicted RBP8.56□□□□□ -1.04
LSAMP-204ENST00000475403 EYSQ5T1H1 3165 aa8.56□□□□□ -1.04
LSAMP-204ENST00000475403 MAST3O60307 1309 aa8.55□□□□□ -1.04
LSAMP-204ENST00000475403 H7C1W4 665 aa8.55□□□□□ -1.04
LSAMP-204ENST00000475403 HMGCRP04035 888 aa8.55□□□□□ -1.04
LSAMP-204ENST00000475403 HIBADHP31937 336 aaKnown RBP8.55□□□□□ -1.04
LSAMP-204ENST00000475403 GYG1P46976 350 aa8.55□□□□□ -1.04
LSAMP-204ENST00000475403 GNAI1P63096 354 aa8.55□□□□□ -1.04
LSAMP-204ENST00000475403 MDM2Q00987 491 aaPredicted RBP8.55□□□□□ -1.04
LSAMP-204ENST00000475403 GCKRQ14397 625 aa8.55□□□□□ -1.04
LSAMP-204ENST00000475403 CCDC57Q2TAC2 916 aa8.55□□□□□ -1.04
LSAMP-204ENST00000475403 FAM109BQ6ICB4 259 aaPredicted RBP8.55□□□□□ -1.04
LSAMP-204ENST00000475403 FASTKD5Q7L8L6 764 aaKnown RBP8.55□□□□□ -1.04
LSAMP-204ENST00000475403 LBHD1Q9BQE6 289 aaPredicted RBP8.55□□□□□ -1.04
LSAMP-204ENST00000475403 HMX1Q9NP08 348 aaPredicted RBP8.55□□□□□ -1.04
LSAMP-204ENST00000475403 IFT57Q9NWB7 429 aa8.55□□□□□ -1.04
LSAMP-204ENST00000475403 ZBED9Q6R2W3 1325 aa8.54□□□□□ -1.04
LSAMP-204ENST00000475403 SPTBN5Q9NRC6 3674 aaKnown RBP8.54□□□□□ -1.04
LSAMP-204ENST00000475403 CSF1RP07333 972 aa8.54□□□□□ -1.04
LSAMP-204ENST00000475403 LDHAL6AQ6ZMR3 332 aa8.54□□□□□ -1.04
LSAMP-204ENST00000475403 ANKRD13CQ8N6S4 541 aa8.54□□□□□ -1.04
LSAMP-204ENST00000475403 TDRD7Q8NHU6 1098 aaKnown RBP8.54□□□□□ -1.04
LSAMP-204ENST00000475403 TBC1D22AQ8WUA7 517 aa8.54□□□□□ -1.04
LSAMP-204ENST00000475403 FAM122AQ96E09 287 aa8.54□□□□□ -1.04
LSAMP-204ENST00000475403 PICK1Q9NRD5 415 aa8.54□□□□□ -1.04
LSAMP-204ENST00000475403 TMEM265A0A087WTH1 108 aa8.53□□□□□ -1.04
LSAMP-204ENST00000475403 CXCL11O14625 94 aa8.53□□□□□ -1.04
LSAMP-204ENST00000475403 FOSL2P15408 326 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms