RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SOGA3Q5TF21 947 aa16.29■□□□□ 0.2
TRAF4-210ENST00000475329 SLF2Q8IX21 1173 aa16.29■□□□□ 0.2
TRAF4-210ENST00000475329 RTKN2Q8IZC4 609 aa16.29■□□□□ 0.2
TRAF4-210ENST00000475329 FBXW7Q969H0 707 aa16.29■□□□□ 0.2
TRAF4-210ENST00000475329 ZSCAN31Q96LW9 406 aaPredicted RBP16.29■□□□□ 0.2
TRAF4-210ENST00000475329 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
TRAF4-210ENST00000475329 SUGT1Q9Y2Z0 365 aa16.29■□□□□ 0.2
TRAF4-210ENST00000475329 MYH1P12882 1939 aa16.29■□□□□ 0.2
TRAF4-210ENST00000475329 GRIK5Q16478 980 aa16.28■□□□□ 0.2
TRAF4-210ENST00000475329 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
TRAF4-210ENST00000475329 DHX32Q7L7V1 743 aaKnown RBP16.28■□□□□ 0.2
TRAF4-210ENST00000475329 PODNQ7Z5L7 613 aa16.28■□□□□ 0.2
TRAF4-210ENST00000475329 RALYLQ86SE5 291 aaKnown RBP16.28■□□□□ 0.2
TRAF4-210ENST00000475329 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
TRAF4-210ENST00000475329 NCOA7Q8NI08 942 aa16.28■□□□□ 0.2
TRAF4-210ENST00000475329 SGIP1Q9BQI5 828 aa16.28■□□□□ 0.2
TRAF4-210ENST00000475329 SH2B1Q9NRF2 756 aaPredicted RBP16.28■□□□□ 0.2
TRAF4-210ENST00000475329 AATFQ9NY61 560 aaKnown RBP eCLIP16.28■□□□□ 0.2
TRAF4-210ENST00000475329 CHMP5Q9NZZ3 219 aa16.28■□□□□ 0.2
TRAF4-210ENST00000475329 PIM2Q9P1W9 311 aa16.28■□□□□ 0.2
TRAF4-210ENST00000475329 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
TRAF4-210ENST00000475329 ECE2O60344 883 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 BAG3O95817 575 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 DDIT3P35638 169 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 KIAA2012Q0VF49 1180 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 TRDNQ13061 729 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 COL9A3Q14050 684 aaPredicted RBP16.27■□□□□ 0.2
TRAF4-210ENST00000475329 TBC1D10CQ8IV04 446 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 INTS4Q96HW7 963 aaKnown RBP16.27■□□□□ 0.2
TRAF4-210ENST00000475329 TCEANC2Q96MN5 208 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 DBNDD1Q9H9R9 158 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.2
TRAF4-210ENST00000475329 WDR19Q8NEZ3 1342 aa16.26■□□□□ 0.19
TRAF4-210ENST00000475329 FGD1P98174 961 aa16.26■□□□□ 0.19
TRAF4-210ENST00000475329 TOB2Q14106 344 aaPredicted RBP16.26■□□□□ 0.19
TRAF4-210ENST00000475329 DIXDC1Q155Q3 683 aa16.26■□□□□ 0.19
TRAF4-210ENST00000475329 AOC3Q16853 763 aa16.26■□□□□ 0.19
TRAF4-210ENST00000475329 PSMD1Q99460 953 aa16.26■□□□□ 0.19
TRAF4-210ENST00000475329 CWC22Q9HCG8 908 aaKnown RBP16.26■□□□□ 0.19
TRAF4-210ENST00000475329 GAKO14976 1311 aa16.25■□□□□ 0.19
TRAF4-210ENST00000475329 PPIP5K2O43314 1243 aa16.25■□□□□ 0.19
TRAF4-210ENST00000475329 MCM5P33992 734 aa16.25■□□□□ 0.19
TRAF4-210ENST00000475329 PPP4CP60510 307 aa16.25■□□□□ 0.19
TRAF4-210ENST00000475329 FKBP1AP62942 108 aaKnown RBP16.25■□□□□ 0.19
TRAF4-210ENST00000475329 EXOSC10Q01780 885 aaKnown RBP16.25■□□□□ 0.19
TRAF4-210ENST00000475329 DALRD3Q5D0E6 543 aaKnown RBP16.25■□□□□ 0.19
TRAF4-210ENST00000475329 Q6ZUG5 572 aa16.25■□□□□ 0.19
TRAF4-210ENST00000475329 MB21D2Q8IYB1 491 aaPredicted RBP16.25■□□□□ 0.19
TRAF4-210ENST00000475329 CNNM2Q9H8M5 875 aa16.25■□□□□ 0.19
TRAF4-210ENST00000475329 ATP8A2Q9NTI2 1148 aa16.25■□□□□ 0.19
TRAF4-210ENST00000475329 SRCAPQ6ZRS2 3230 aa16.25■□□□□ 0.19
TRAF4-210ENST00000475329 MYH8P13535 1937 aa16.24■□□□□ 0.19
TRAF4-210ENST00000475329 PLCG2P16885 1265 aa16.24■□□□□ 0.19
TRAF4-210ENST00000475329 PTGER2P43116 358 aa16.24■□□□□ 0.19
TRAF4-210ENST00000475329 PPARAQ07869 468 aa16.24■□□□□ 0.19
TRAF4-210ENST00000475329 STRIP1Q5VSL9 837 aa16.24■□□□□ 0.19
TRAF4-210ENST00000475329 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
TRAF4-210ENST00000475329 CERS5Q8N5B7 392 aa16.24■□□□□ 0.19
TRAF4-210ENST00000475329 FAM163AQ96GL9 167 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-210ENST00000475329 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
TRAF4-210ENST00000475329 RNF41Q9H4P4 317 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-210ENST00000475329 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-210ENST00000475329 ANAPC4Q9UJX5 808 aa16.24■□□□□ 0.19
TRAF4-210ENST00000475329 NEDD4P46934 1319 aa16.23■□□□□ 0.19
TRAF4-210ENST00000475329 GPR75-ASB3A0A0A6YYF3 556 aa16.23■□□□□ 0.19
TRAF4-210ENST00000475329 LARGE1O95461 756 aa16.23■□□□□ 0.19
TRAF4-210ENST00000475329 BTDP43251 543 aa16.23■□□□□ 0.19
TRAF4-210ENST00000475329 CTDSPL2Q05D32 466 aa16.23■□□□□ 0.19
TRAF4-210ENST00000475329 AKNAD1Q5T1N1 836 aa16.23■□□□□ 0.19
TRAF4-210ENST00000475329 SH3RF3Q8TEJ3 882 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-210ENST00000475329 STAG1Q8WVM7 1258 aa16.23■□□□□ 0.19
TRAF4-210ENST00000475329 AGXT2Q9BYV1 514 aa16.23■□□□□ 0.19
TRAF4-210ENST00000475329 VPS33BQ9H267 617 aa16.23■□□□□ 0.19
TRAF4-210ENST00000475329 DCP1AQ9NPI6 582 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-210ENST00000475329 ARPP21Q9UBL0 812 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-210ENST00000475329 TPCN1Q9ULQ1 816 aa16.23■□□□□ 0.19
TRAF4-210ENST00000475329 USP17L3A6NCW0 530 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 USP17L4A6NCW7 530 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 MINDY4BA8MYZ0 360 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 PRC1O43663 620 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 USP5P45974 858 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 ME3Q16798 604 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 MFSD6Q6ZSS7 791 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 USP17L1Q7RTZ2 530 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 FBXL16Q8N461 479 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 BRF1Q92994 677 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 LRRC2Q9BYS8 371 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 KRT23Q9C075 422 aa16.22■□□□□ 0.19
TRAF4-210ENST00000475329 TTF2Q9UNY4 1162 aaKnown RBP16.22■□□□□ 0.19
TRAF4-210ENST00000475329 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.22■□□□□ 0.19
TRAF4-210ENST00000475329 B4E1Z4 1266 aa16.21■□□□□ 0.19
TRAF4-210ENST00000475329 F8W031 263 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-210ENST00000475329 PCP11498 1178 aaKnown RBP16.21■□□□□ 0.19
TRAF4-210ENST00000475329 SBK1Q52WX2 424 aa16.21■□□□□ 0.19
TRAF4-210ENST00000475329 DACT2Q5SW24 774 aa16.21■□□□□ 0.19
TRAF4-210ENST00000475329 CTR9Q6PD62 1173 aa16.21■□□□□ 0.19
TRAF4-210ENST00000475329 CCDC83Q8IWF9 413 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms