RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 MAP3K9P80192 1104 aa14.65□□□□□ -0.06
CLIP2-204ENST00000474962 DIXDC1Q155Q3 683 aa14.65□□□□□ -0.06
CLIP2-204ENST00000474962 C20orf194Q5TEA3 1177 aa14.65□□□□□ -0.06
CLIP2-204ENST00000474962 OPTNQ96CV9 577 aa14.65□□□□□ -0.06
CLIP2-204ENST00000474962 GNL3LQ9NVN8 582 aaKnown RBP14.65□□□□□ -0.06
CLIP2-204ENST00000474962 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.65□□□□□ -0.06
CLIP2-204ENST00000474962 ZBTB7BO15156 539 aaPredicted RBP14.64□□□□□ -0.07
CLIP2-204ENST00000474962 PRDX5P30044 214 aa14.64□□□□□ -0.07
CLIP2-204ENST00000474962 TFCP2Q12800 502 aa14.64□□□□□ -0.07
CLIP2-204ENST00000474962 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
CLIP2-204ENST00000474962 CFHR5Q9BXR6 569 aa14.64□□□□□ -0.07
CLIP2-204ENST00000474962 HTTP42858 3142 aa14.64□□□□□ -0.07
CLIP2-204ENST00000474962 ECM29Q5VYK3 1845 aa14.64□□□□□ -0.07
CLIP2-204ENST00000474962 FKTNO75072 461 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 ALDH1A1P00352 501 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 LDHBP07195 334 aaKnown RBP14.63□□□□□ -0.07
CLIP2-204ENST00000474962 MLLT1Q03111 559 aaPredicted RBP14.63□□□□□ -0.07
CLIP2-204ENST00000474962 VGLL4Q14135 290 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 NOM1Q5C9Z4 860 aaKnown RBP14.63□□□□□ -0.07
CLIP2-204ENST00000474962 FKBP1CQ5VVH2 108 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 CCDC102BQ68D86 513 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 CDC42EP5Q6NZY7 148 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 MIGA2Q7L4E1 593 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 FAM83AQ86UY5 434 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 ZKSCAN4Q969J2 545 aaPredicted RBP14.63□□□□□ -0.07
CLIP2-204ENST00000474962 MS4A4AQ96JQ5 239 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 DENND2AQ9ULE3 1009 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 DAGLAQ9Y4D2 1042 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 MAST3O60307 1309 aa14.63□□□□□ -0.07
CLIP2-204ENST00000474962 TESPA1A2RU30 521 aaPredicted RBP14.62□□□□□ -0.07
CLIP2-204ENST00000474962 TCP10Q12799 353 aa14.62□□□□□ -0.07
CLIP2-204ENST00000474962 MTX1Q13505 466 aa14.62□□□□□ -0.07
CLIP2-204ENST00000474962 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.62□□□□□ -0.07
CLIP2-204ENST00000474962 USP40Q9NVE5 1235 aa14.62□□□□□ -0.07
CLIP2-204ENST00000474962 TMOD2Q9NZR1 351 aa14.62□□□□□ -0.07
CLIP2-204ENST00000474962 HPS5Q9UPZ3 1129 aa14.62□□□□□ -0.07
CLIP2-204ENST00000474962 PNMA6EA0A0J9YXQ4 647 aa14.61□□□□□ -0.07
CLIP2-204ENST00000474962 SOX10P56693 466 aa14.61□□□□□ -0.07
CLIP2-204ENST00000474962 NFIAQ12857 509 aa14.61□□□□□ -0.07
CLIP2-204ENST00000474962 PKN2Q16513 984 aaKnown RBP14.61□□□□□ -0.07
CLIP2-204ENST00000474962 ZFPM1Q8IX07 1006 aa14.61□□□□□ -0.07
CLIP2-204ENST00000474962 XAGE2Q96GT9 111 aa14.61□□□□□ -0.07
CLIP2-204ENST00000474962 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
CLIP2-204ENST00000474962 A0A1B0GUL7 405 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 SEMA3EO15041 775 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 CRHR2Q13324 411 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 RASGRF1Q13972 1273 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 OTUD7BQ6GQQ9 843 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 FAM151AQ8WW52 585 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 BRI3BPQ8WY22 251 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 WRNIP1Q96S55 665 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 C1orf115Q9H7X2 142 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 AKAP2Q9Y2D5 859 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 CSADQ9Y600 493 aa14.6□□□□□ -0.07
CLIP2-204ENST00000474962 CRBNQ96SW2 442 aa14.59□□□□□ -0.07
CLIP2-204ENST00000474962 FAM198AQ9UFP1 575 aa14.59□□□□□ -0.07
CLIP2-204ENST00000474962 ABCF2Q9UG63 623 aa14.59□□□□□ -0.07
CLIP2-204ENST00000474962 SNCAIPQ9Y6H5 919 aa14.59□□□□□ -0.07
CLIP2-204ENST00000474962 SALL1Q9NSC2 1324 aa14.59□□□□□ -0.07
CLIP2-204ENST00000474962 MKI67P46013 3256 aaKnown RBP14.58□□□□□ -0.07
CLIP2-204ENST00000474962 CCL15-CCL14A0A0B4J2E2 113 aa14.58□□□□□ -0.08
CLIP2-204ENST00000474962 NEFLP07196 543 aa14.58□□□□□ -0.08
CLIP2-204ENST00000474962 INPP5BP32019 993 aa14.58□□□□□ -0.08
CLIP2-204ENST00000474962 GTF2A2P52657 109 aa14.58□□□□□ -0.08
CLIP2-204ENST00000474962 G3BP1Q13283 466 aaKnown RBP eCLIP14.58□□□□□ -0.08
CLIP2-204ENST00000474962 CCL15Q16663 113 aa14.58□□□□□ -0.08
CLIP2-204ENST00000474962 ZBTB40Q9NUA8 1239 aa14.58□□□□□ -0.08
CLIP2-204ENST00000474962 ARAP2Q8WZ64 1704 aa14.58□□□□□ -0.08
CLIP2-204ENST00000474962 SPDYE5A6NIY4 337 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 IRF6O14896 467 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 HMMRO75330 724 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 ATP8B2P98198 1209 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 CAP1Q01518 475 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 DCAF15Q66K64 600 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 FBXO46Q6PJ61 603 aaPredicted RBP14.57□□□□□ -0.08
CLIP2-204ENST00000474962 TBC1D9Q6ZT07 1266 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 ERO1BQ86YB8 467 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 RPAP2Q8IXW5 612 aaPredicted RBP14.57□□□□□ -0.08
CLIP2-204ENST00000474962 FAM43AQ8N2R8 423 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 HOOK2Q96ED9 719 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 ZNF341Q9BYN7 854 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 TRIM17Q9Y577 477 aa14.57□□□□□ -0.08
CLIP2-204ENST00000474962 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
CLIP2-204ENST00000474962 AAMPQ13685 434 aa14.56□□□□□ -0.08
CLIP2-204ENST00000474962 GORABQ5T7V8 394 aa14.56□□□□□ -0.08
CLIP2-204ENST00000474962 PI16Q6UXB8 463 aa14.56□□□□□ -0.08
CLIP2-204ENST00000474962 OTOP1Q7RTM1 612 aa14.56□□□□□ -0.08
CLIP2-204ENST00000474962 ZGPATQ8N5A5 531 aaKnown RBP14.56□□□□□ -0.08
CLIP2-204ENST00000474962 CD99L2Q8TCZ2 262 aa14.56□□□□□ -0.08
CLIP2-204ENST00000474962 ZNF384Q8TF68 577 aa14.56□□□□□ -0.08
CLIP2-204ENST00000474962 FAM163AQ96GL9 167 aaPredicted RBP14.56□□□□□ -0.08
CLIP2-204ENST00000474962 HMG20BQ9P0W2 317 aa14.56□□□□□ -0.08
CLIP2-204ENST00000474962 ZNF112Q9UJU3 913 aa14.56□□□□□ -0.08
CLIP2-204ENST00000474962 SLURP2P0DP57 97 aa14.55□□□□□ -0.08
CLIP2-204ENST00000474962 RGS3P49796 1198 aa14.55□□□□□ -0.08
CLIP2-204ENST00000474962 SP3Q02447 781 aa14.55□□□□□ -0.08
CLIP2-204ENST00000474962 MECOMQ03112 1051 aa14.55□□□□□ -0.08
CLIP2-204ENST00000474962 SPTY2D1Q68D10 685 aaPredicted RBP14.55□□□□□ -0.08
CLIP2-204ENST00000474962 DZIP1Q86YF9 867 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms