RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
SAMM50-203ENST00000474323 PPM1EQ8WY54 764 aa16.7■□□□□ 0.26
SAMM50-203ENST00000474323 WDR24Q96S15 920 aa16.7■□□□□ 0.26
SAMM50-203ENST00000474323 VPS18Q9P253 973 aa16.7■□□□□ 0.26
SAMM50-203ENST00000474323 EIF3CLB5ME19 914 aaKnown RBP16.7■□□□□ 0.26
SAMM50-203ENST00000474323 EIF3JO75822 258 aaKnown RBP16.7■□□□□ 0.26
SAMM50-203ENST00000474323 PACS2Q86VP3 889 aa16.7■□□□□ 0.26
SAMM50-203ENST00000474323 TMEM139Q8IV31 216 aa16.7■□□□□ 0.26
SAMM50-203ENST00000474323 FAM177A1Q8N128 213 aaPredicted RBP16.7■□□□□ 0.26
SAMM50-203ENST00000474323 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
SAMM50-203ENST00000474323 MYCBPQ99417 103 aaPredicted RBP16.7■□□□□ 0.26
SAMM50-203ENST00000474323 EIF3CQ99613 913 aaKnown RBP16.7■□□□□ 0.26
SAMM50-203ENST00000474323 HSD3B7Q9H2F3 369 aa16.7■□□□□ 0.26
SAMM50-203ENST00000474323 POTEB2H3BUK9 544 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 CTDNEP1O95476 244 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 TOP1P11387 765 aaKnown RBP16.69■□□□□ 0.26
SAMM50-203ENST00000474323 USP5P45974 858 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 ILDR1Q86SU0 546 aaPredicted RBP16.69■□□□□ 0.26
SAMM50-203ENST00000474323 KCNG4Q8TDN1 519 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 XAGE3Q8WTP9 111 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 KIFC2Q96AC6 838 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 BOLA2Q9H3K6 86 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 TMOD3Q9NYL9 352 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
SAMM50-203ENST00000474323 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
SAMM50-203ENST00000474323 GLI3P10071 1580 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 SERPINC1P01008 464 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 ATP1A3P13637 1013 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 MMP14P50281 582 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 TUBB4BP68371 445 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
SAMM50-203ENST00000474323 BEND6Q5SZJ8 279 aaPredicted RBP16.69■□□□□ 0.26
SAMM50-203ENST00000474323 COPS6Q7L5N1 327 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 LINC00301Q8NCQ3 95 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 CHMP4CQ96CF2 233 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 PDE11AQ9HCR9 933 aa16.69■□□□□ 0.26
SAMM50-203ENST00000474323 EXOC5O00471 708 aa16.68■□□□□ 0.26
SAMM50-203ENST00000474323 BIN1O00499 593 aa16.68■□□□□ 0.26
SAMM50-203ENST00000474323 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
SAMM50-203ENST00000474323 CORO7P57737 925 aa16.68■□□□□ 0.26
SAMM50-203ENST00000474323 SF3A1Q15459 793 aaKnown RBP16.68■□□□□ 0.26
SAMM50-203ENST00000474323 CFAP100Q494V2 611 aa16.68■□□□□ 0.26
SAMM50-203ENST00000474323 SALL1Q9NSC2 1324 aa16.68■□□□□ 0.26
SAMM50-203ENST00000474323 STX10O60499 249 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 SASH1O94885 1247 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 ZNF202O95125 648 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 SIL1Q9H173 461 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 RAB21Q9UL25 225 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 UBR2Q8IWV8 1755 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 ERLIN1O75477 346 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 CLSTN1O94985 981 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 YEATS4O95619 227 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 ATP2B1P20020 1258 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 FOSBP53539 338 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 G3BP1Q13283 466 aaKnown RBP eCLIP16.67■□□□□ 0.26
SAMM50-203ENST00000474323 BAG1Q99933 345 aaPredicted RBP16.67■□□□□ 0.26
SAMM50-203ENST00000474323 CCDC8Q9H0W5 538 aaPredicted RBP16.67■□□□□ 0.26
SAMM50-203ENST00000474323 DEF6Q9H4E7 631 aa16.67■□□□□ 0.26
SAMM50-203ENST00000474323 MYL5Q02045 173 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 MCM6Q14566 821 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 STK38Q15208 465 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 DPF2Q92785 391 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 DHX58Q96C10 678 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 C9orf78Q9NZ63 289 aaPredicted RBP16.66■□□□□ 0.26
SAMM50-203ENST00000474323 KCPQ6ZWJ8 1503 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 SPATA31A1Q5TZJ5 1347 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 PAPPAQ13219 1627 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 LAMB4A4D0S4 1761 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 CHMP4BP1P59074 171 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 DHX32Q7L7V1 743 aaKnown RBP16.66■□□□□ 0.26
SAMM50-203ENST00000474323 LRP10Q7Z4F1 713 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 SRGAP1Q7Z6B7 1085 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 PIGBQ92521 554 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 POLR3EQ9NVU0 708 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 WNK3Q9BYP7 1800 aa16.66■□□□□ 0.26
SAMM50-203ENST00000474323 CYP21A2P08686 494 aa16.65■□□□□ 0.26
SAMM50-203ENST00000474323 SUGP1Q8IWZ8 645 aaKnown RBP16.65■□□□□ 0.26
SAMM50-203ENST00000474323 SECISBP2LQ93073 1101 aaKnown RBP16.65■□□□□ 0.26
SAMM50-203ENST00000474323 L1RE1Q9UN81 338 aa16.65■□□□□ 0.26
SAMM50-203ENST00000474323 ITGB4P16144 1822 aa16.65■□□□□ 0.26
SAMM50-203ENST00000474323 LOC102724159A0A0B4J2E5 919 aa16.65■□□□□ 0.26
SAMM50-203ENST00000474323 CPP00450 1065 aa16.65■□□□□ 0.26
SAMM50-203ENST00000474323 PWP2Q15269 919 aaKnown RBP16.65■□□□□ 0.26
SAMM50-203ENST00000474323 MSANTD4Q8NCY6 345 aa16.65■□□□□ 0.26
SAMM50-203ENST00000474323 AGXT2Q9BYV1 514 aa16.65■□□□□ 0.26
SAMM50-203ENST00000474323 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
SAMM50-203ENST00000474323 SPTLC2O15270 562 aa16.64■□□□□ 0.25
SAMM50-203ENST00000474323 TUBB2AQ13885 445 aa16.64■□□□□ 0.25
SAMM50-203ENST00000474323 CEP112Q8N8E3 955 aa16.64■□□□□ 0.25
SAMM50-203ENST00000474323 LINS1Q8NG48 757 aa16.64■□□□□ 0.25
SAMM50-203ENST00000474323 FAM71BQ8TC56 605 aa16.64■□□□□ 0.25
SAMM50-203ENST00000474323 TUBB2BQ9BVA1 445 aa16.64■□□□□ 0.25
SAMM50-203ENST00000474323 LRRC2Q9BYS8 371 aa16.64■□□□□ 0.25
SAMM50-203ENST00000474323 TUBE1Q9UJT0 475 aa16.64■□□□□ 0.25
SAMM50-203ENST00000474323 CUTAO60888 179 aa16.64■□□□□ 0.25
SAMM50-203ENST00000474323 CMA1P23946 247 aa16.64■□□□□ 0.25
SAMM50-203ENST00000474323 TBX2Q13207 712 aaPredicted RBP16.64■□□□□ 0.25
SAMM50-203ENST00000474323 FOXR1Q6PIV2 292 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms