RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MANSC4A6NHS7 340 aaPredicted RBP22.88■■□□□ 1.25
CCDC171-206ENST00000474193 ZBTB48P10074 688 aaPredicted RBP22.88■■□□□ 1.25
CCDC171-206ENST00000474193 TM4SF4P48230 202 aa22.88■■□□□ 1.25
CCDC171-206ENST00000474193 CACNB3P54284 484 aa22.88■■□□□ 1.25
CCDC171-206ENST00000474193 RASGRF1Q13972 1273 aa22.88■■□□□ 1.25
CCDC171-206ENST00000474193 DAGLAQ9Y4D2 1042 aa22.88■■□□□ 1.25
CCDC171-206ENST00000474193 DIXDC1Q155Q3 683 aa22.87■■□□□ 1.25
CCDC171-206ENST00000474193 DCAF15Q66K64 600 aa22.87■■□□□ 1.25
CCDC171-206ENST00000474193 USP40Q9NVE5 1235 aa22.87■■□□□ 1.25
CCDC171-206ENST00000474193 CSADQ9Y600 493 aa22.87■■□□□ 1.25
CCDC171-206ENST00000474193 ALDH1A1P00352 501 aa22.86■■□□□ 1.25
CCDC171-206ENST00000474193 LDHCP07864 332 aa22.86■■□□□ 1.25
CCDC171-206ENST00000474193 MAP3K9P80192 1104 aa22.86■■□□□ 1.25
CCDC171-206ENST00000474193 HSP90AB4PQ58FF6 505 aa22.86■■□□□ 1.25
CCDC171-206ENST00000474193 TTC39AQ5SRH9 613 aa22.86■■□□□ 1.25
CCDC171-206ENST00000474193 OTUD7BQ6GQQ9 843 aa22.86■■□□□ 1.25
CCDC171-206ENST00000474193 ERC1Q8IUD2 1116 aa22.86■■□□□ 1.25
CCDC171-206ENST00000474193 SPATA5Q8NB90 893 aa22.86■■□□□ 1.25
CCDC171-206ENST00000474193 TEPSINQ96N21 525 aa22.86■■□□□ 1.25
CCDC171-206ENST00000474193 NOP58Q9Y2X3 529 aaKnown RBP22.86■■□□□ 1.25
CCDC171-206ENST00000474193 GSTO1P78417 241 aa22.85■■□□□ 1.25
CCDC171-206ENST00000474193 TNNI3KQ59H18 835 aa22.85■■□□□ 1.25
CCDC171-206ENST00000474193 CDC42EP5Q6NZY7 148 aa22.85■■□□□ 1.25
CCDC171-206ENST00000474193 FAM151AQ8WW52 585 aa22.85■■□□□ 1.25
CCDC171-206ENST00000474193 WNK4Q96J92 1243 aa22.85■■□□□ 1.25
CCDC171-206ENST00000474193 CLMNQ96JQ2 1002 aa22.85■■□□□ 1.25
CCDC171-206ENST00000474193 FPGT-TNNI3KV9GXZ4 949 aa22.85■■□□□ 1.25
CCDC171-206ENST00000474193 HMMRO75330 724 aa22.84■■□□□ 1.25
CCDC171-206ENST00000474193 ARID4AP29374 1257 aaPredicted RBP22.83■■□□□ 1.25
CCDC171-206ENST00000474193 CEP85Q6P2H3 762 aa22.83■■□□□ 1.25
CCDC171-206ENST00000474193 RPAP2Q8IXW5 612 aaPredicted RBP22.83■■□□□ 1.25
CCDC171-206ENST00000474193 RAI14Q9P0K7 980 aa22.83■■□□□ 1.25
CCDC171-206ENST00000474193 HMG20BQ9P0W2 317 aa22.83■■□□□ 1.25
CCDC171-206ENST00000474193 LRP2BPQ9P2M1 347 aa22.83■■□□□ 1.25
CCDC171-206ENST00000474193 SSC5DA1L4H1 1573 aa22.83■■□□□ 1.25
CCDC171-206ENST00000474193 CASP8AP2Q9UKL3 1982 aa22.82■■□□□ 1.24
CCDC171-206ENST00000474193 TCP10Q12799 353 aa22.82■■□□□ 1.24
CCDC171-206ENST00000474193 FAM163AQ96GL9 167 aaPredicted RBP22.82■■□□□ 1.24
CCDC171-206ENST00000474193 NOL10Q9BSC4 688 aaKnown RBP22.82■■□□□ 1.24
CCDC171-206ENST00000474193 ELP3Q9H9T3 547 aa22.82■■□□□ 1.24
CCDC171-206ENST00000474193 DGKZQ13574 1117 aa22.81■■□□□ 1.24
CCDC171-206ENST00000474193 CRBNQ96SW2 442 aa22.81■■□□□ 1.24
CCDC171-206ENST00000474193 ZNF341Q9BYN7 854 aa22.81■■□□□ 1.24
CCDC171-206ENST00000474193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.81■■□□□ 1.24
CCDC171-206ENST00000474193 RPAP1Q9BWH6 1393 aaPredicted RBP22.8■■□□□ 1.24
CCDC171-206ENST00000474193 OPTNQ96CV9 577 aa22.8■■□□□ 1.24
CCDC171-206ENST00000474193 ZBTB40Q9NUA8 1239 aa22.8■■□□□ 1.24
CCDC171-206ENST00000474193 AK9Q5TCS8 1911 aa22.8■■□□□ 1.24
CCDC171-206ENST00000474193 ENTPD3O75355 529 aa22.79■■□□□ 1.24
CCDC171-206ENST00000474193 TBC1D8O95759 1140 aa22.79■■□□□ 1.24
CCDC171-206ENST00000474193 MECOMQ03112 1051 aa22.79■■□□□ 1.24
CCDC171-206ENST00000474193 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.79■■□□□ 1.24
CCDC171-206ENST00000474193 ZSCAN29Q8IWY8 852 aaPredicted RBP22.79■■□□□ 1.24
CCDC171-206ENST00000474193 CDAN1Q8IWY9 1227 aa22.79■■□□□ 1.24
CCDC171-206ENST00000474193 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.79■■□□□ 1.24
CCDC171-206ENST00000474193 ABHD8Q96I13 439 aa22.79■■□□□ 1.24
CCDC171-206ENST00000474193 WRNIP1Q96S55 665 aa22.79■■□□□ 1.24
CCDC171-206ENST00000474193 DBNDD2Q9BQY9 259 aa22.79■■□□□ 1.24
CCDC171-206ENST00000474193 GAKO14976 1311 aa22.79■■□□□ 1.24
CCDC171-206ENST00000474193 MYH2Q9UKX2 1941 aa22.78■■□□□ 1.24
CCDC171-206ENST00000474193 WDHD1O75717 1129 aaPredicted RBP22.78■■□□□ 1.24
CCDC171-206ENST00000474193 MAP4K4O95819 1239 aaPredicted RBP22.78■■□□□ 1.24
CCDC171-206ENST00000474193 MCAMP43121 646 aa22.78■■□□□ 1.24
CCDC171-206ENST00000474193 BTDP43251 543 aa22.78■■□□□ 1.24
CCDC171-206ENST00000474193 VGLL4Q14135 290 aa22.78■■□□□ 1.24
CCDC171-206ENST00000474193 MIGA2Q7L4E1 593 aa22.78■■□□□ 1.24
CCDC171-206ENST00000474193 IFNL1Q8IU54 200 aa22.78■■□□□ 1.24
CCDC171-206ENST00000474193 MROH7-TTC4A0A0A0MT08 1334 aa22.78■■□□□ 1.24
CCDC171-206ENST00000474193 IGSF3O75054 1194 aa22.77■■□□□ 1.24
CCDC171-206ENST00000474193 GTF2A2P52657 109 aa22.77■■□□□ 1.24
CCDC171-206ENST00000474193 AAMPQ13685 434 aa22.77■■□□□ 1.24
CCDC171-206ENST00000474193 TBC1D9Q6ZT07 1266 aa22.77■■□□□ 1.24
CCDC171-206ENST00000474193 ZNF512BQ96KM6 892 aaPredicted RBP22.77■■□□□ 1.24
CCDC171-206ENST00000474193 IDI2Q9BXS1 227 aa22.77■■□□□ 1.24
CCDC171-206ENST00000474193 EXOC6BQ9Y2D4 811 aa22.77■■□□□ 1.24
CCDC171-206ENST00000474193 GPR75-ASB3A0A0A6YYF3 556 aa22.76■■□□□ 1.23
CCDC171-206ENST00000474193 RGS3P49796 1198 aa22.76■■□□□ 1.23
CCDC171-206ENST00000474193 NFIAQ12857 509 aa22.76■■□□□ 1.23
CCDC171-206ENST00000474193 NOM1Q5C9Z4 860 aaKnown RBP22.76■■□□□ 1.23
CCDC171-206ENST00000474193 PI16Q6UXB8 463 aa22.76■■□□□ 1.23
CCDC171-206ENST00000474193 ERO1BQ86YB8 467 aa22.76■■□□□ 1.23
CCDC171-206ENST00000474193 MCOLN1Q9GZU1 580 aa22.76■■□□□ 1.23
CCDC171-206ENST00000474193 CCDC8Q9H0W5 538 aaPredicted RBP22.76■■□□□ 1.23
CCDC171-206ENST00000474193 SNRKQ9NRH2 765 aa22.76■■□□□ 1.23
CCDC171-206ENST00000474193 FAM198AQ9UFP1 575 aa22.76■■□□□ 1.23
CCDC171-206ENST00000474193 BAG3O95817 575 aa22.75■■□□□ 1.23
CCDC171-206ENST00000474193 NEFLP07196 543 aa22.75■■□□□ 1.23
CCDC171-206ENST00000474193 NSUN4Q96CB9 384 aaKnown RBP22.75■■□□□ 1.23
CCDC171-206ENST00000474193 OTUD5Q96G74 571 aa22.75■■□□□ 1.23
CCDC171-206ENST00000474193 CFHR5Q9BXR6 569 aa22.75■■□□□ 1.23
CCDC171-206ENST00000474193 GPR25O00155 361 aa22.74■■□□□ 1.23
CCDC171-206ENST00000474193 IRX6P78412 446 aaPredicted RBP22.74■■□□□ 1.23
CCDC171-206ENST00000474193 NAA16Q6N069 864 aaPredicted RBP22.74■■□□□ 1.23
CCDC171-206ENST00000474193 CTU1Q7Z7A3 348 aaKnown RBP22.74■■□□□ 1.23
CCDC171-206ENST00000474193 AACSQ86V21 672 aa22.74■■□□□ 1.23
CCDC171-206ENST00000474193 CLASRPQ8N2M8 674 aaKnown RBP22.74■■□□□ 1.23
CCDC171-206ENST00000474193 ZKSCAN4Q969J2 545 aaPredicted RBP22.74■■□□□ 1.23
CCDC171-206ENST00000474193 EAF2Q96CJ1 260 aaPredicted RBP22.74■■□□□ 1.23
CCDC171-206ENST00000474193 KIF1BPQ96EK5 621 aa22.74■■□□□ 1.23
CCDC171-206ENST00000474193 SPDYE5A6NIY4 337 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms