RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 MCAMP43121 646 aa22.09■■□□□ 1.13
UPF3A-203ENST00000474056 FKBP1CQ5VVH2 108 aa22.09■■□□□ 1.13
UPF3A-203ENST00000474056 SPRYD7Q5W111 196 aa22.09■■□□□ 1.13
UPF3A-203ENST00000474056 FAM83AQ86UY5 434 aa22.09■■□□□ 1.13
UPF3A-203ENST00000474056 SLC10A4Q96EP9 437 aa22.09■■□□□ 1.13
UPF3A-203ENST00000474056 DBNDD2Q9BQY9 259 aa22.09■■□□□ 1.13
UPF3A-203ENST00000474056 MAST2Q6P0Q8 1798 aa22.09■■□□□ 1.13
UPF3A-203ENST00000474056 RPAP1Q9BWH6 1393 aaPredicted RBP22.09■■□□□ 1.13
UPF3A-203ENST00000474056 DZIP1Q86YF9 867 aaKnown RBP22.08■■□□□ 1.13
UPF3A-203ENST00000474056 SPATA5Q8NB90 893 aa22.08■■□□□ 1.13
UPF3A-203ENST00000474056 WNK4Q96J92 1243 aa22.08■■□□□ 1.13
UPF3A-203ENST00000474056 GAKO14976 1311 aa22.07■■□□□ 1.12
UPF3A-203ENST00000474056 UNCXA6NJT0 531 aa22.07■■□□□ 1.12
UPF3A-203ENST00000474056 NFIAQ12857 509 aa22.07■■□□□ 1.12
UPF3A-203ENST00000474056 C20orf194Q5TEA3 1177 aa22.07■■□□□ 1.12
UPF3A-203ENST00000474056 ERICH6Q7L0X2 663 aa22.07■■□□□ 1.12
UPF3A-203ENST00000474056 ANKRD13AQ8IZ07 590 aa22.07■■□□□ 1.12
UPF3A-203ENST00000474056 EXOC6BQ9Y2D4 811 aa22.07■■□□□ 1.12
UPF3A-203ENST00000474056 UQCRFS1P1P0C7P4 283 aa22.06■■□□□ 1.12
UPF3A-203ENST00000474056 TM4SF4P48230 202 aa22.06■■□□□ 1.12
UPF3A-203ENST00000474056 SPTY2D1Q68D10 685 aaPredicted RBP22.06■■□□□ 1.12
UPF3A-203ENST00000474056 TBC1D9Q6ZT07 1266 aa22.06■■□□□ 1.12
UPF3A-203ENST00000474056 ZBTB40Q9NUA8 1239 aa22.06■■□□□ 1.12
UPF3A-203ENST00000474056 USP40Q9NVE5 1235 aa22.06■■□□□ 1.12
UPF3A-203ENST00000474056 ZBTB48P10074 688 aaPredicted RBP22.05■■□□□ 1.12
UPF3A-203ENST00000474056 GJA5P36382 358 aa22.05■■□□□ 1.12
UPF3A-203ENST00000474056 TCP10Q12799 353 aa22.05■■□□□ 1.12
UPF3A-203ENST00000474056 TTC39AQ5SRH9 613 aa22.05■■□□□ 1.12
UPF3A-203ENST00000474056 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.05■■□□□ 1.12
UPF3A-203ENST00000474056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.05■■□□□ 1.12
UPF3A-203ENST00000474056 ZNF384Q8TF68 577 aa22.05■■□□□ 1.12
UPF3A-203ENST00000474056 TLR7Q9NYK1 1049 aaKnown RBP22.05■■□□□ 1.12
UPF3A-203ENST00000474056 CDK5RAP2Q96SN8 1893 aa22.05■■□□□ 1.12
UPF3A-203ENST00000474056 MROH7-TTC4A0A0A0MT08 1334 aa22.05■■□□□ 1.12
UPF3A-203ENST00000474056 CAPN15O75808 1086 aa22.04■■□□□ 1.12
UPF3A-203ENST00000474056 MECOMQ03112 1051 aa22.04■■□□□ 1.12
UPF3A-203ENST00000474056 SREBF2Q12772 1141 aa22.04■■□□□ 1.12
UPF3A-203ENST00000474056 CCDC158Q5M9N0 1113 aa22.04■■□□□ 1.12
UPF3A-203ENST00000474056 FAM151AQ8WW52 585 aa22.04■■□□□ 1.12
UPF3A-203ENST00000474056 EAF2Q96CJ1 260 aaPredicted RBP22.04■■□□□ 1.12
UPF3A-203ENST00000474056 CCDC8Q9H0W5 538 aaPredicted RBP22.04■■□□□ 1.12
UPF3A-203ENST00000474056 ELP3Q9H9T3 547 aa22.04■■□□□ 1.12
UPF3A-203ENST00000474056 FAM198AQ9UFP1 575 aa22.04■■□□□ 1.12
UPF3A-203ENST00000474056 DBNLQ9UJU6 430 aaKnown RBP22.04■■□□□ 1.12
UPF3A-203ENST00000474056 RFX7Q2KHR2 1363 aa22.03■■□□□ 1.12
UPF3A-203ENST00000474056 BTDP43251 543 aa22.03■■□□□ 1.12
UPF3A-203ENST00000474056 SLF2Q8IX21 1173 aa22.03■■□□□ 1.12
UPF3A-203ENST00000474056 NSUN4Q96CB9 384 aaKnown RBP22.03■■□□□ 1.12
UPF3A-203ENST00000474056 FAM163AQ96GL9 167 aaPredicted RBP22.03■■□□□ 1.12
UPF3A-203ENST00000474056 SNRKQ9NRH2 765 aa22.03■■□□□ 1.12
UPF3A-203ENST00000474056 MANSC4A6NHS7 340 aaPredicted RBP22.02■■□□□ 1.12
UPF3A-203ENST00000474056 MAP3K9P80192 1104 aa22.02■■□□□ 1.12
UPF3A-203ENST00000474056 VGLL4Q14135 290 aa22.02■■□□□ 1.12
UPF3A-203ENST00000474056 SIRT2Q8IXJ6 389 aa22.02■■□□□ 1.12
UPF3A-203ENST00000474056 RPAP2Q8IXW5 612 aaPredicted RBP22.02■■□□□ 1.12
UPF3A-203ENST00000474056 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.02■■□□□ 1.12
UPF3A-203ENST00000474056 OPTNQ96CV9 577 aa22.02■■□□□ 1.12
UPF3A-203ENST00000474056 PDE3AQ14432 1141 aa22.01■■□□□ 1.11
UPF3A-203ENST00000474056 MIGA2Q7L4E1 593 aa22.01■■□□□ 1.11
UPF3A-203ENST00000474056 ERC1Q8IUD2 1116 aa22.01■■□□□ 1.11
UPF3A-203ENST00000474056 ZFPM1Q8IX07 1006 aa22.01■■□□□ 1.11
UPF3A-203ENST00000474056 CNKSR2Q8WXI2 1034 aa22.01■■□□□ 1.11
UPF3A-203ENST00000474056 HOOK2Q96ED9 719 aa22.01■■□□□ 1.11
UPF3A-203ENST00000474056 WRNIP1Q96S55 665 aa22.01■■□□□ 1.11
UPF3A-203ENST00000474056 IDI2Q9BXS1 227 aa22.01■■□□□ 1.11
UPF3A-203ENST00000474056 RAI14Q9P0K7 980 aa22.01■■□□□ 1.11
UPF3A-203ENST00000474056 TBC1D8O95759 1140 aa22■■□□□ 1.11
UPF3A-203ENST00000474056 RGS3P49796 1198 aa22■■□□□ 1.11
UPF3A-203ENST00000474056 DCAF15Q66K64 600 aa22■■□□□ 1.11
UPF3A-203ENST00000474056 ZNF512BQ96KM6 892 aaPredicted RBP22■■□□□ 1.11
UPF3A-203ENST00000474056 CSADQ9Y600 493 aa22■■□□□ 1.11
UPF3A-203ENST00000474056 FOCADQ5VW36 1801 aa22■■□□□ 1.11
UPF3A-203ENST00000474056 GPR75-ASB3A0A0A6YYF3 556 aa21.99■■□□□ 1.11
UPF3A-203ENST00000474056 HMMRO75330 724 aa21.99■■□□□ 1.11
UPF3A-203ENST00000474056 CYP2E1P05181 493 aaPredicted RBP21.99■■□□□ 1.11
UPF3A-203ENST00000474056 RHBDL3P58872 404 aa21.99■■□□□ 1.11
UPF3A-203ENST00000474056 HSP90AB4PQ58FF6 505 aa21.99■■□□□ 1.11
UPF3A-203ENST00000474056 RHPN1Q8TCX5 695 aa21.99■■□□□ 1.11
UPF3A-203ENST00000474056 CHMP4BQ9H444 224 aaKnown RBP21.99■■□□□ 1.11
UPF3A-203ENST00000474056 IL1RAPL2Q9NP60 686 aa21.99■■□□□ 1.11
UPF3A-203ENST00000474056 DDX4Q9NQI0 724 aaKnown RBP21.99■■□□□ 1.11
UPF3A-203ENST00000474056 LRP2BPQ9P2M1 347 aa21.99■■□□□ 1.11
UPF3A-203ENST00000474056 SNCAIPQ9Y6H5 919 aa21.99■■□□□ 1.11
UPF3A-203ENST00000474056 IGF2BP3O00425 579 aaKnown RBP eCLIP21.98■■□□□ 1.11
UPF3A-203ENST00000474056 WDHD1O75717 1129 aaPredicted RBP21.98■■□□□ 1.11
UPF3A-203ENST00000474056 ZAP70P43403 619 aa21.98■■□□□ 1.11
UPF3A-203ENST00000474056 GSTO1P78417 241 aa21.98■■□□□ 1.11
UPF3A-203ENST00000474056 AACSQ86V21 672 aa21.98■■□□□ 1.11
UPF3A-203ENST00000474056 IFNL1Q8IU54 200 aa21.98■■□□□ 1.11
UPF3A-203ENST00000474056 ZKSCAN4Q969J2 545 aaPredicted RBP21.98■■□□□ 1.11
UPF3A-203ENST00000474056 ZNF341Q9BYN7 854 aa21.98■■□□□ 1.11
UPF3A-203ENST00000474056 APBB1O00213 710 aa21.97■■□□□ 1.11
UPF3A-203ENST00000474056 ENTPD3O75355 529 aa21.97■■□□□ 1.11
UPF3A-203ENST00000474056 INHBEP58166 350 aa21.97■■□□□ 1.11
UPF3A-203ENST00000474056 MCOLN1Q9GZU1 580 aa21.97■■□□□ 1.11
UPF3A-203ENST00000474056 R3HDMLQ9H3Y0 253 aa21.97■■□□□ 1.11
UPF3A-203ENST00000474056 ATRNL1Q5VV63 1379 aa21.97■■□□□ 1.11
UPF3A-203ENST00000474056 LDHCP07864 332 aa21.96■■□□□ 1.11
UPF3A-203ENST00000474056 INPP5BP32019 993 aa21.96■■□□□ 1.11
UPF3A-203ENST00000474056 PICALMQ13492 652 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms