RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 DDIT3P35638 169 aa17.55■□□□□ 0.4
LMNA-213ENST00000473598 GTF2IP78347 998 aa17.55■□□□□ 0.4
LMNA-213ENST00000473598 KIAA2012Q0VF49 1180 aa17.55■□□□□ 0.4
LMNA-213ENST00000473598 TSGA10IPQ3SY00 556 aa17.55■□□□□ 0.4
LMNA-213ENST00000473598 ARMT1Q9H993 441 aa17.55■□□□□ 0.4
LMNA-213ENST00000473598 CHMP5Q9NZZ3 219 aa17.55■□□□□ 0.4
LMNA-213ENST00000473598 LAMA4Q16363 1823 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 IARSP41252 1262 aaKnown RBP17.54■□□□□ 0.4
LMNA-213ENST00000473598 MFSD14BQ5SR56 506 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 DZIP1Q86YF9 867 aaKnown RBP17.54■□□□□ 0.4
LMNA-213ENST00000473598 LCORLQ8N3X6 602 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 MIGA1Q8NAN2 632 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 BBXQ8WY36 941 aaPredicted RBP17.54■□□□□ 0.4
LMNA-213ENST00000473598 PSME4Q14997 1843 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 MAGEB6P1A0A0J9YX57 407 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 PPIP5K2O43314 1243 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 CYP21A2P08686 494 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 GRIK5Q16478 980 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.54■□□□□ 0.4
LMNA-213ENST00000473598 RIOK1Q9BRS2 568 aaKnown RBP17.54■□□□□ 0.4
LMNA-213ENST00000473598 DBNDD1Q9H9R9 158 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 GRPEL1Q9HAV7 217 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 CTNNA3Q9UI47 895 aa17.54■□□□□ 0.4
LMNA-213ENST00000473598 PATL2C9JE40 543 aaKnown RBP17.53■□□□□ 0.4
LMNA-213ENST00000473598 K7ELQ4 463 aaPredicted RBP17.53■□□□□ 0.4
LMNA-213ENST00000473598 ST18O60284 1047 aa17.53■□□□□ 0.4
LMNA-213ENST00000473598 OFD1O75665 1012 aa17.53■□□□□ 0.4
LMNA-213ENST00000473598 FGAP02671 866 aa17.53■□□□□ 0.4
LMNA-213ENST00000473598 GNAT2P19087 354 aa17.53■□□□□ 0.4
LMNA-213ENST00000473598 NEK4P51957 841 aa17.53■□□□□ 0.4
LMNA-213ENST00000473598 ADCK5Q3MIX3 580 aa17.53■□□□□ 0.4
LMNA-213ENST00000473598 TTLL5Q6EMB2 1281 aa17.53■□□□□ 0.4
LMNA-213ENST00000473598 ECE2O60344 883 aa17.52■□□□□ 0.4
LMNA-213ENST00000473598 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
LMNA-213ENST00000473598 TM6SF1Q9BZW5 370 aa17.52■□□□□ 0.4
LMNA-213ENST00000473598 GSTO1P78417 241 aa17.52■□□□□ 0.39
LMNA-213ENST00000473598 UPF3BQ9BZI7 483 aaKnown RBP17.52■□□□□ 0.39
LMNA-213ENST00000473598 TAF6LQ9Y6J9 622 aa17.52■□□□□ 0.39
LMNA-213ENST00000473598 RPAP1Q9BWH6 1393 aaPredicted RBP17.52■□□□□ 0.39
LMNA-213ENST00000473598 TIAM2Q8IVF5 1701 aa17.51■□□□□ 0.39
LMNA-213ENST00000473598 APPP05067 770 aa17.51■□□□□ 0.39
LMNA-213ENST00000473598 KRT32Q14532 448 aa17.51■□□□□ 0.39
LMNA-213ENST00000473598 ALX1Q15699 326 aa17.51■□□□□ 0.39
LMNA-213ENST00000473598 FBXW7Q969H0 707 aa17.51■□□□□ 0.39
LMNA-213ENST00000473598 JAKMIP1Q96N16 626 aaKnown RBP17.51■□□□□ 0.39
LMNA-213ENST00000473598 VPS33BQ9H267 617 aa17.51■□□□□ 0.39
LMNA-213ENST00000473598 SUGT1Q9Y2Z0 365 aa17.51■□□□□ 0.39
LMNA-213ENST00000473598 ZMYM6O95789 1325 aa17.51■□□□□ 0.39
LMNA-213ENST00000473598 GSG1L2A8MUP6 293 aa17.5■□□□□ 0.39
LMNA-213ENST00000473598 CASTP20810 708 aaKnown RBP17.5■□□□□ 0.39
LMNA-213ENST00000473598 PSMA5P28066 241 aa17.5■□□□□ 0.39
LMNA-213ENST00000473598 DYNLL1P63167 89 aaKnown RBP17.5■□□□□ 0.39
LMNA-213ENST00000473598 IMMTQ16891 758 aaKnown RBP17.5■□□□□ 0.39
LMNA-213ENST00000473598 ZSWIM6Q9HCJ5 1215 aa17.5■□□□□ 0.39
LMNA-213ENST00000473598 NAP1L2Q9ULW6 460 aaPredicted RBP17.5■□□□□ 0.39
LMNA-213ENST00000473598 SLC4A4Q9Y6R1 1079 aa17.5■□□□□ 0.39
LMNA-213ENST00000473598 DICER1Q9UPY3 1922 aaKnown RBP17.5■□□□□ 0.39
LMNA-213ENST00000473598 BAZ2AQ9UIF9 1905 aaKnown RBP17.5■□□□□ 0.39
LMNA-213ENST00000473598 PRKAB2O43741 272 aa17.5■□□□□ 0.39
LMNA-213ENST00000473598 LDHCP07864 332 aa17.5■□□□□ 0.39
LMNA-213ENST00000473598 MCM4P33991 863 aa17.5■□□□□ 0.39
LMNA-213ENST00000473598 DMTNQ08495 405 aa17.5■□□□□ 0.39
LMNA-213ENST00000473598 IFNL3Q8IZI9 196 aa17.5■□□□□ 0.39
LMNA-213ENST00000473598 EPB41L4AQ9HCS5 686 aaPredicted RBP17.5■□□□□ 0.39
LMNA-213ENST00000473598 AATFQ9NY61 560 aaKnown RBP eCLIP17.5■□□□□ 0.39
LMNA-213ENST00000473598 CDK5RAP2Q96SN8 1893 aa17.49■□□□□ 0.39
LMNA-213ENST00000473598 DIXDC1Q155Q3 683 aa17.49■□□□□ 0.39
LMNA-213ENST00000473598 STRIP1Q5VSL9 837 aa17.49■□□□□ 0.39
LMNA-213ENST00000473598 CERS5Q8N5B7 392 aa17.49■□□□□ 0.39
LMNA-213ENST00000473598 KCNQ5Q9NR82 932 aa17.49■□□□□ 0.39
LMNA-213ENST00000473598 MROH7-TTC4A0A0A0MT08 1334 aa17.49■□□□□ 0.39
LMNA-213ENST00000473598 FKBP1AP62942 108 aaKnown RBP17.48■□□□□ 0.39
LMNA-213ENST00000473598 RUFY3Q7L099 469 aa17.48■□□□□ 0.39
LMNA-213ENST00000473598 IPO4Q8TEX9 1081 aaKnown RBP17.48■□□□□ 0.39
LMNA-213ENST00000473598 NACAP1Q9BZK3 213 aa17.48■□□□□ 0.39
LMNA-213ENST00000473598 CIZ1Q9ULV3 898 aaPredicted RBP17.48■□□□□ 0.39
LMNA-213ENST00000473598 ZNF213O14771 459 aa17.48■□□□□ 0.39
LMNA-213ENST00000473598 SLF2Q8IX21 1173 aa17.48■□□□□ 0.39
LMNA-213ENST00000473598 JDP2Q8WYK2 163 aa17.48■□□□□ 0.39
LMNA-213ENST00000473598 TTC14Q96N46 770 aa17.48■□□□□ 0.39
LMNA-213ENST00000473598 NAPBQ9H115 298 aa17.48■□□□□ 0.39
LMNA-213ENST00000473598 CYP46A1Q9Y6A2 500 aa17.48■□□□□ 0.39
LMNA-213ENST00000473598 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 YDJCA8MPS7 323 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 CPA1P15085 419 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 STOX1Q6ZVD7 989 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 SDR42E1Q8WUS8 393 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 FAM163AQ96GL9 167 aaPredicted RBP17.47■□□□□ 0.39
LMNA-213ENST00000473598 MXD3Q9BW11 206 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 E7EWF7 191 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 BAG3O95817 575 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 YY1P25490 414 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 MCM2P49736 904 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 PPP4CP60510 307 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 HAND2P61296 217 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 BLOC1S2Q6QNY1 142 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms