RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TCP10Q12799 353 aa15.92■□□□□ 0.14
TRAF4-209ENST00000473421 NFIAQ12857 509 aa15.92■□□□□ 0.14
TRAF4-209ENST00000473421 FAM83AQ86UY5 434 aa15.92■□□□□ 0.14
TRAF4-209ENST00000473421 MRS2Q9HD23 443 aa15.92■□□□□ 0.14
TRAF4-209ENST00000473421 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
TRAF4-209ENST00000473421 PDHXO00330 501 aa15.91■□□□□ 0.14
TRAF4-209ENST00000473421 FRAT2O75474 233 aaPredicted RBP15.91■□□□□ 0.14
TRAF4-209ENST00000473421 ARHGEF6Q15052 776 aa15.91■□□□□ 0.14
TRAF4-209ENST00000473421 DIXDC1Q155Q3 683 aa15.91■□□□□ 0.14
TRAF4-209ENST00000473421 UBE2Q1Q7Z7E8 422 aa15.91■□□□□ 0.14
TRAF4-209ENST00000473421 SRRDQ9UH36 339 aa15.91■□□□□ 0.14
TRAF4-209ENST00000473421 CAVIN4Q5BKX8 364 aa15.9■□□□□ 0.14
TRAF4-209ENST00000473421 FKBP1CQ5VVH2 108 aa15.9■□□□□ 0.14
TRAF4-209ENST00000473421 GPAT2Q6NUI2 795 aa15.9■□□□□ 0.14
TRAF4-209ENST00000473421 CDC42EP5Q6NZY7 148 aa15.9■□□□□ 0.14
TRAF4-209ENST00000473421 TBC1D22AQ8WUA7 517 aa15.9■□□□□ 0.14
TRAF4-209ENST00000473421 MRIQ9BWK5 157 aa15.9■□□□□ 0.14
TRAF4-209ENST00000473421 ZCCHC17Q9NP64 241 aaKnown RBP15.9■□□□□ 0.14
TRAF4-209ENST00000473421 FAM198AQ9UFP1 575 aa15.9■□□□□ 0.14
TRAF4-209ENST00000473421 ZNF112Q9UJU3 913 aa15.9■□□□□ 0.14
TRAF4-209ENST00000473421 DAGLAQ9Y4D2 1042 aa15.9■□□□□ 0.14
TRAF4-209ENST00000473421 CYP2C8P10632 490 aa15.89■□□□□ 0.13
TRAF4-209ENST00000473421 RFX5P48382 616 aaPredicted RBP15.89■□□□□ 0.13
TRAF4-209ENST00000473421 PPATQ06203 517 aa15.89■□□□□ 0.13
TRAF4-209ENST00000473421 KIF22Q14807 665 aa15.89■□□□□ 0.13
TRAF4-209ENST00000473421 HHIPL2Q6UWX4 724 aa15.89■□□□□ 0.13
TRAF4-209ENST00000473421 ANKRD23Q86SG2 305 aa15.89■□□□□ 0.13
TRAF4-209ENST00000473421 ZNF341Q9BYN7 854 aa15.89■□□□□ 0.13
TRAF4-209ENST00000473421 USP44Q9H0E7 712 aa15.89■□□□□ 0.13
TRAF4-209ENST00000473421 GABRQQ9UN88 632 aa15.89■□□□□ 0.13
TRAF4-209ENST00000473421 KCNH4Q9UQ05 1017 aa15.89■□□□□ 0.13
TRAF4-209ENST00000473421 CCL5P13501 91 aa15.88■□□□□ 0.13
TRAF4-209ENST00000473421 PRDX5P30044 214 aa15.88■□□□□ 0.13
TRAF4-209ENST00000473421 PRKCZQ05513 592 aa15.88■□□□□ 0.13
TRAF4-209ENST00000473421 MRPL50Q8N5N7 158 aaKnown RBP15.88■□□□□ 0.13
TRAF4-209ENST00000473421 DPF3Q92784 378 aa15.88■□□□□ 0.13
TRAF4-209ENST00000473421 PRO3102Q9H379 93 aa15.88■□□□□ 0.13
TRAF4-209ENST00000473421 TMOD2Q9NZR1 351 aa15.88■□□□□ 0.13
TRAF4-209ENST00000473421 RPAP1Q9BWH6 1393 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-209ENST00000473421 FMNL1O95466 1100 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-209ENST00000473421 GRK4P32298 578 aa15.87■□□□□ 0.13
TRAF4-209ENST00000473421 ATG9AQ7Z3C6 839 aa15.87■□□□□ 0.13
TRAF4-209ENST00000473421 FAM151AQ8WW52 585 aa15.87■□□□□ 0.13
TRAF4-209ENST00000473421 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-209ENST00000473421 COL6A3P12111 3177 aa15.87■□□□□ 0.13
TRAF4-209ENST00000473421 LAMA3Q16787 3333 aa15.86■□□□□ 0.13
TRAF4-209ENST00000473421 AK9Q5TCS8 1911 aa15.86■□□□□ 0.13
TRAF4-209ENST00000473421 GNRH1P01148 92 aa15.86■□□□□ 0.13
TRAF4-209ENST00000473421 BCRP11274 1271 aa15.86■□□□□ 0.13
TRAF4-209ENST00000473421 GJA8P48165 433 aa15.86■□□□□ 0.13
TRAF4-209ENST00000473421 PUM3Q15397 648 aaKnown RBP15.86■□□□□ 0.13
TRAF4-209ENST00000473421 DCAF15Q66K64 600 aa15.86■□□□□ 0.13
TRAF4-209ENST00000473421 RAET1EQ8TD07 263 aa15.86■□□□□ 0.13
TRAF4-209ENST00000473421 UNC93B1Q9H1C4 597 aa15.86■□□□□ 0.13
TRAF4-209ENST00000473421 MYPNQ86TC9 1320 aa15.86■□□□□ 0.13
TRAF4-209ENST00000473421 PHF20L1A8MW92 1017 aa15.85■□□□□ 0.13
TRAF4-209ENST00000473421 GJB1P08034 283 aa15.85■□□□□ 0.13
TRAF4-209ENST00000473421 PRMT2P55345 433 aa15.85■□□□□ 0.13
TRAF4-209ENST00000473421 SH3BP5LQ7L8J4 393 aa15.85■□□□□ 0.13
TRAF4-209ENST00000473421 CCDC84Q86UT8 332 aaPredicted RBP15.85■□□□□ 0.13
TRAF4-209ENST00000473421 RNF208Q9H0X6 261 aa15.85■□□□□ 0.13
TRAF4-209ENST00000473421 SUGT1Q9Y2Z0 365 aa15.85■□□□□ 0.13
TRAF4-209ENST00000473421 ATRNL1Q5VV63 1379 aa15.85■□□□□ 0.13
TRAF4-209ENST00000473421 MGAMO43451 1857 aa15.84■□□□□ 0.13
TRAF4-209ENST00000473421 WDHD1O75717 1129 aaPredicted RBP15.84■□□□□ 0.13
TRAF4-209ENST00000473421 IFIT1P09914 478 aaKnown RBP15.84■□□□□ 0.13
TRAF4-209ENST00000473421 ELNP15502 786 aa15.84■□□□□ 0.13
TRAF4-209ENST00000473421 NOL9Q5SY16 702 aaKnown RBP15.84■□□□□ 0.13
TRAF4-209ENST00000473421 USP40Q9NVE5 1235 aa15.84■□□□□ 0.13
TRAF4-209ENST00000473421 MYH13Q9UKX3 1938 aa15.84■□□□□ 0.13
TRAF4-209ENST00000473421 EYA2O00167 538 aa15.83■□□□□ 0.12
TRAF4-209ENST00000473421 SOX1O00570 391 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-209ENST00000473421 U2AF1L4Q8WU68 220 aaKnown RBP15.83■□□□□ 0.12
TRAF4-209ENST00000473421 BIN2Q9UBW5 565 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-209ENST00000473421 MAST3O60307 1309 aa15.83■□□□□ 0.12
TRAF4-209ENST00000473421 ZNF521Q96K83 1311 aa15.83■□□□□ 0.12
TRAF4-209ENST00000473421 KIF16BQ96L93 1317 aa15.83■□□□□ 0.12
TRAF4-209ENST00000473421 DOCK3Q8IZD9 2030 aa15.82■□□□□ 0.12
TRAF4-209ENST00000473421 PHKA1P46020 1223 aa15.82■□□□□ 0.12
TRAF4-209ENST00000473421 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
TRAF4-209ENST00000473421 WDR66Q8TBY9 1149 aa15.82■□□□□ 0.12
TRAF4-209ENST00000473421 SSH1Q8WYL5 1049 aa15.82■□□□□ 0.12
TRAF4-209ENST00000473421 HOOK2Q96ED9 719 aa15.82■□□□□ 0.12
TRAF4-209ENST00000473421 SIL1Q9H173 461 aa15.82■□□□□ 0.12
TRAF4-209ENST00000473421 ZHX2Q9Y6X8 837 aa15.82■□□□□ 0.12
TRAF4-209ENST00000473421 ZBTB7BO15156 539 aaPredicted RBP15.81■□□□□ 0.12
TRAF4-209ENST00000473421 PTPRAP18433 802 aa15.81■□□□□ 0.12
TRAF4-209ENST00000473421 ADORA1P30542 326 aa15.81■□□□□ 0.12
TRAF4-209ENST00000473421 FLT3LGP49771 235 aa15.81■□□□□ 0.12
TRAF4-209ENST00000473421 RGS3P49796 1198 aa15.81■□□□□ 0.12
TRAF4-209ENST00000473421 LPIN2Q92539 896 aa15.81■□□□□ 0.12
TRAF4-209ENST00000473421 DDX4Q9NQI0 724 aaKnown RBP15.81■□□□□ 0.12
TRAF4-209ENST00000473421 A0A0C4DFX4 3053 aa15.8■□□□□ 0.12
TRAF4-209ENST00000473421 A0A0G2JLL6 359 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-209ENST00000473421 DDTLA6NHG4 134 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-209ENST00000473421 CXCL11O14625 94 aa15.8■□□□□ 0.12
TRAF4-209ENST00000473421 FARP2O94887 1054 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-209ENST00000473421 SGPL1O95470 568 aa15.8■□□□□ 0.12
TRAF4-209ENST00000473421 SLC5A1P13866 664 aa15.8■□□□□ 0.12
TRAF4-209ENST00000473421 HOXD10P28358 340 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms