RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 PRDX5P30044 214 aa22.26■■□□□ 1.15
SNX4-204ENST00000473417 ADORA1P30542 326 aa22.26■■□□□ 1.15
SNX4-204ENST00000473417 GJA5P36382 358 aa22.26■■□□□ 1.15
SNX4-204ENST00000473417 CTU1Q7Z7A3 348 aaKnown RBP22.26■■□□□ 1.15
SNX4-204ENST00000473417 RPAP2Q8IXW5 612 aaPredicted RBP22.26■■□□□ 1.15
SNX4-204ENST00000473417 ZNF296Q8WUU4 475 aaPredicted RBP22.26■■□□□ 1.15
SNX4-204ENST00000473417 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.26■■□□□ 1.15
SNX4-204ENST00000473417 DENND2AQ9ULE3 1009 aa22.26■■□□□ 1.15
SNX4-204ENST00000473417 ALDH1A1P00352 501 aa22.25■■□□□ 1.15
SNX4-204ENST00000473417 MLLT1Q03111 559 aaPredicted RBP22.25■■□□□ 1.15
SNX4-204ENST00000473417 OS9Q13438 667 aaPredicted RBP22.25■■□□□ 1.15
SNX4-204ENST00000473417 CCDC102BQ68D86 513 aa22.25■■□□□ 1.15
SNX4-204ENST00000473417 DAGLAQ9Y4D2 1042 aa22.25■■□□□ 1.15
SNX4-204ENST00000473417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.25■■□□□ 1.15
SNX4-204ENST00000473417 GPR25O00155 361 aa22.24■■□□□ 1.15
SNX4-204ENST00000473417 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.24■■□□□ 1.15
SNX4-204ENST00000473417 IFNL1Q8IU54 200 aa22.24■■□□□ 1.15
SNX4-204ENST00000473417 SIRT2Q8IXJ6 389 aa22.24■■□□□ 1.15
SNX4-204ENST00000473417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.24■■□□□ 1.15
SNX4-204ENST00000473417 CRBNQ96SW2 442 aa22.24■■□□□ 1.15
SNX4-204ENST00000473417 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
SNX4-204ENST00000473417 PDS5AQ29RF7 1337 aaKnown RBP22.24■■□□□ 1.15
SNX4-204ENST00000473417 A0A1B0GUL7 405 aa22.23■■□□□ 1.15
SNX4-204ENST00000473417 IGF2BP3O00425 579 aaKnown RBP eCLIP22.23■■□□□ 1.15
SNX4-204ENST00000473417 TNRC18O15417 2968 aaPredicted RBP22.23■■□□□ 1.15
SNX4-204ENST00000473417 LDHBP07195 334 aaKnown RBP22.23■■□□□ 1.15
SNX4-204ENST00000473417 TIMM10P62072 90 aa22.23■■□□□ 1.15
SNX4-204ENST00000473417 DIXDC1Q155Q3 683 aa22.23■■□□□ 1.15
SNX4-204ENST00000473417 OPTNQ96CV9 577 aa22.23■■□□□ 1.15
SNX4-204ENST00000473417 ELP3Q9H9T3 547 aa22.23■■□□□ 1.15
SNX4-204ENST00000473417 AKAP2Q9Y2D5 859 aa22.23■■□□□ 1.15
SNX4-204ENST00000473417 NOP58Q9Y2X3 529 aaKnown RBP22.23■■□□□ 1.15
SNX4-204ENST00000473417 MAST2Q6P0Q8 1798 aa22.22■■□□□ 1.15
SNX4-204ENST00000473417 RASGRF1Q13972 1273 aa22.22■■□□□ 1.15
SNX4-204ENST00000473417 VGLL4Q14135 290 aa22.22■■□□□ 1.15
SNX4-204ENST00000473417 R3HDMLQ9H3Y0 253 aa22.22■■□□□ 1.15
SNX4-204ENST00000473417 HMMRO75330 724 aa22.21■■□□□ 1.15
SNX4-204ENST00000473417 ZGPATQ8N5A5 531 aaKnown RBP22.21■■□□□ 1.15
SNX4-204ENST00000473417 XAGE2Q96GT9 111 aa22.21■■□□□ 1.15
SNX4-204ENST00000473417 EXOC6BQ9Y2D4 811 aa22.21■■□□□ 1.15
SNX4-204ENST00000473417 TESPA1A2RU30 521 aaPredicted RBP22.2■■□□□ 1.14
SNX4-204ENST00000473417 MAP3K9P80192 1104 aa22.2■■□□□ 1.14
SNX4-204ENST00000473417 PKN2Q16513 984 aaKnown RBP22.2■■□□□ 1.14
SNX4-204ENST00000473417 CDC42EP5Q6NZY7 148 aa22.2■■□□□ 1.14
SNX4-204ENST00000473417 HOOK2Q96ED9 719 aa22.2■■□□□ 1.14
SNX4-204ENST00000473417 NEUROD6Q96NK8 337 aa22.2■■□□□ 1.14
SNX4-204ENST00000473417 CSADQ9Y600 493 aa22.2■■□□□ 1.14
SNX4-204ENST00000473417 HTTP42858 3142 aa22.2■■□□□ 1.14
SNX4-204ENST00000473417 MYO5AQ9Y4I1 1855 aaKnown RBP22.2■■□□□ 1.14
SNX4-204ENST00000473417 FKTNO75072 461 aa22.19■■□□□ 1.14
SNX4-204ENST00000473417 FAM151AQ8WW52 585 aa22.19■■□□□ 1.14
SNX4-204ENST00000473417 CNKSR2Q8WXI2 1034 aa22.19■■□□□ 1.14
SNX4-204ENST00000473417 RFX7Q2KHR2 1363 aa22.18■■□□□ 1.14
SNX4-204ENST00000473417 GAKO14976 1311 aa22.18■■□□□ 1.14
SNX4-204ENST00000473417 MS4A4AQ96JQ5 239 aa22.18■■□□□ 1.14
SNX4-204ENST00000473417 WRNIP1Q96S55 665 aa22.18■■□□□ 1.14
SNX4-204ENST00000473417 PTPN18Q99952 460 aa22.18■■□□□ 1.14
SNX4-204ENST00000473417 SNCAIPQ9Y6H5 919 aa22.18■■□□□ 1.14
SNX4-204ENST00000473417 CDK5RAP2Q96SN8 1893 aa22.17■■□□□ 1.14
SNX4-204ENST00000473417 SPDYE5A6NIY4 337 aa22.17■■□□□ 1.14
SNX4-204ENST00000473417 NFIAQ12857 509 aa22.17■■□□□ 1.14
SNX4-204ENST00000473417 DCAF15Q66K64 600 aa22.17■■□□□ 1.14
SNX4-204ENST00000473417 OTUD7BQ6GQQ9 843 aa22.17■■□□□ 1.14
SNX4-204ENST00000473417 DOCK1Q14185 1865 aa22.16■■□□□ 1.14
SNX4-204ENST00000473417 APBB1O00213 710 aa22.16■■□□□ 1.14
SNX4-204ENST00000473417 HSP90AB4PQ58FF6 505 aa22.16■■□□□ 1.14
SNX4-204ENST00000473417 TNNI3KQ59H18 835 aa22.16■■□□□ 1.14
SNX4-204ENST00000473417 OTUD5Q96G74 571 aa22.16■■□□□ 1.14
SNX4-204ENST00000473417 FAM198AQ9UFP1 575 aa22.16■■□□□ 1.14
SNX4-204ENST00000473417 FPGT-TNNI3KV9GXZ4 949 aa22.16■■□□□ 1.14
SNX4-204ENST00000473417 TCP10Q12799 353 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 CRHR2Q13324 411 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 DZIP1Q86YF9 867 aaKnown RBP22.15■■□□□ 1.14
SNX4-204ENST00000473417 ERC1Q8IUD2 1116 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 BRI3BPQ8WY22 251 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 ZKSCAN4Q969J2 545 aaPredicted RBP22.15■■□□□ 1.14
SNX4-204ENST00000473417 ZNF341Q9BYN7 854 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 GPR108Q9NPR9 543 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 USP40Q9NVE5 1235 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 ABCF2Q9UG63 623 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 HPS5Q9UPZ3 1129 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 PCDHB15Q9Y5E8 787 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 PTPRFP10586 1907 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 FOCADQ5VW36 1801 aa22.15■■□□□ 1.14
SNX4-204ENST00000473417 GTF2A2P52657 109 aa22.14■■□□□ 1.13
SNX4-204ENST00000473417 GORABQ5T7V8 394 aa22.14■■□□□ 1.13
SNX4-204ENST00000473417 ERO1BQ86YB8 467 aa22.14■■□□□ 1.13
SNX4-204ENST00000473417 HMG20BQ9P0W2 317 aa22.14■■□□□ 1.13
SNX4-204ENST00000473417 PHIPQ8WWQ0 1821 aa22.14■■□□□ 1.13
SNX4-204ENST00000473417 ATRNL1Q5VV63 1379 aa22.13■■□□□ 1.13
SNX4-204ENST00000473417 ATAD5Q96QE3 1844 aa22.13■■□□□ 1.13
SNX4-204ENST00000473417 CCL15-CCL14A0A0B4J2E2 113 aa22.13■■□□□ 1.13
SNX4-204ENST00000473417 ARID4AP29374 1257 aaPredicted RBP22.13■■□□□ 1.13
SNX4-204ENST00000473417 CCL15Q16663 113 aa22.13■■□□□ 1.13
SNX4-204ENST00000473417 SPTY2D1Q68D10 685 aaPredicted RBP22.13■■□□□ 1.13
SNX4-204ENST00000473417 FBXO46Q6PJ61 603 aaPredicted RBP22.13■■□□□ 1.13
SNX4-204ENST00000473417 SLF2Q8IX21 1173 aa22.13■■□□□ 1.13
SNX4-204ENST00000473417 RHPN1Q8TCX5 695 aa22.13■■□□□ 1.13
SNX4-204ENST00000473417 FAM163AQ96GL9 167 aaPredicted RBP22.13■■□□□ 1.13
SNX4-204ENST00000473417 IDI2Q9BXS1 227 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms