RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TRPA1O75762 1119 aa27.74■■■□□ 2.03
PTP4A1-203ENST00000473334 UQCRFS1P1P0C7P4 283 aa27.74■■■□□ 2.03
PTP4A1-203ENST00000473334 CDC42EP5Q6NZY7 148 aa27.74■■■□□ 2.03
PTP4A1-203ENST00000473334 ANKRD13AQ8IZ07 590 aa27.74■■■□□ 2.03
PTP4A1-203ENST00000473334 SPATA5Q8NB90 893 aa27.74■■■□□ 2.03
PTP4A1-203ENST00000473334 GAKO14976 1311 aa27.73■■■□□ 2.03
PTP4A1-203ENST00000473334 SREBF2Q12772 1141 aa27.73■■■□□ 2.03
PTP4A1-203ENST00000473334 SLF2Q8IX21 1173 aa27.73■■■□□ 2.03
PTP4A1-203ENST00000473334 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.73■■■□□ 2.03
PTP4A1-203ENST00000473334 CASP8AP2Q9UKL3 1982 aa27.73■■■□□ 2.03
PTP4A1-203ENST00000473334 ZBTB48P10074 688 aaPredicted RBP27.72■■■□□ 2.03
PTP4A1-203ENST00000473334 TM4SF4P48230 202 aa27.72■■■□□ 2.03
PTP4A1-203ENST00000473334 PI16Q6UXB8 463 aa27.72■■■□□ 2.03
PTP4A1-203ENST00000473334 ERICH6Q7L0X2 663 aa27.72■■■□□ 2.03
PTP4A1-203ENST00000473334 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.72■■■□□ 2.03
PTP4A1-203ENST00000473334 WNK4Q96J92 1243 aa27.72■■■□□ 2.03
PTP4A1-203ENST00000473334 DBNDD2Q9BQY9 259 aa27.72■■■□□ 2.03
PTP4A1-203ENST00000473334 CHMP4BQ9H444 224 aaKnown RBP27.72■■■□□ 2.03
PTP4A1-203ENST00000473334 MCAMP43121 646 aa27.71■■■□□ 2.03
PTP4A1-203ENST00000473334 CCDC158Q5M9N0 1113 aa27.71■■■□□ 2.03
PTP4A1-203ENST00000473334 TTC39AQ5SRH9 613 aa27.71■■■□□ 2.03
PTP4A1-203ENST00000473334 FAM151AQ8WW52 585 aa27.71■■■□□ 2.03
PTP4A1-203ENST00000473334 HOOK2Q96ED9 719 aa27.71■■■□□ 2.03
PTP4A1-203ENST00000473334 ZBTB40Q9NUA8 1239 aa27.71■■■□□ 2.03
PTP4A1-203ENST00000473334 USP40Q9NVE5 1235 aa27.71■■■□□ 2.03
PTP4A1-203ENST00000473334 FAM163AQ96GL9 167 aaPredicted RBP27.7■■■□□ 2.02
PTP4A1-203ENST00000473334 PDE3AQ14432 1141 aa27.69■■■□□ 2.02
PTP4A1-203ENST00000473334 ERC1Q8IUD2 1116 aa27.69■■■□□ 2.02
PTP4A1-203ENST00000473334 RPAP2Q8IXW5 612 aaPredicted RBP27.69■■■□□ 2.02
PTP4A1-203ENST00000473334 EXOC6BQ9Y2D4 811 aa27.69■■■□□ 2.02
PTP4A1-203ENST00000473334 MROH7-TTC4A0A0A0MT08 1334 aa27.68■■■□□ 2.02
PTP4A1-203ENST00000473334 MANSC4A6NHS7 340 aaPredicted RBP27.68■■■□□ 2.02
PTP4A1-203ENST00000473334 MECOMQ03112 1051 aa27.68■■■□□ 2.02
PTP4A1-203ENST00000473334 NFIAQ12857 509 aa27.68■■■□□ 2.02
PTP4A1-203ENST00000473334 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.68■■■□□ 2.02
PTP4A1-203ENST00000473334 AK9Q5TCS8 1911 aa27.68■■■□□ 2.02
PTP4A1-203ENST00000473334 MAP3K9P80192 1104 aa27.67■■■□□ 2.02
PTP4A1-203ENST00000473334 TCP10Q12799 353 aa27.67■■■□□ 2.02
PTP4A1-203ENST00000473334 HSP90AB4PQ58FF6 505 aa27.67■■■□□ 2.02
PTP4A1-203ENST00000473334 DCAF15Q66K64 600 aa27.67■■■□□ 2.02
PTP4A1-203ENST00000473334 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.67■■■□□ 2.02
PTP4A1-203ENST00000473334 TBC1D9Q6ZT07 1266 aa27.67■■■□□ 2.02
PTP4A1-203ENST00000473334 ELP3Q9H9T3 547 aa27.67■■■□□ 2.02
PTP4A1-203ENST00000473334 FAM198AQ9UFP1 575 aa27.67■■■□□ 2.02
PTP4A1-203ENST00000473334 DBNLQ9UJU6 430 aaKnown RBP27.67■■■□□ 2.02
PTP4A1-203ENST00000473334 MAST2Q6P0Q8 1798 aa27.66■■■□□ 2.02
PTP4A1-203ENST00000473334 HMMRO75330 724 aa27.66■■■□□ 2.02
PTP4A1-203ENST00000473334 BTDP43251 543 aa27.66■■■□□ 2.02
PTP4A1-203ENST00000473334 C20orf194Q5TEA3 1177 aa27.66■■■□□ 2.02
PTP4A1-203ENST00000473334 EAF2Q96CJ1 260 aaPredicted RBP27.66■■■□□ 2.02
PTP4A1-203ENST00000473334 ZNF512BQ96KM6 892 aaPredicted RBP27.66■■■□□ 2.02
PTP4A1-203ENST00000473334 CCDC8Q9H0W5 538 aaPredicted RBP27.66■■■□□ 2.02
PTP4A1-203ENST00000473334 CSADQ9Y600 493 aa27.66■■■□□ 2.02
PTP4A1-203ENST00000473334 RFX7Q2KHR2 1363 aa27.65■■■□□ 2.02
PTP4A1-203ENST00000473334 GJA5P36382 358 aa27.65■■■□□ 2.02
PTP4A1-203ENST00000473334 INHBEP58166 350 aa27.65■■■□□ 2.02
PTP4A1-203ENST00000473334 GSTO1P78417 241 aa27.65■■■□□ 2.02
PTP4A1-203ENST00000473334 VGLL4Q14135 290 aa27.65■■■□□ 2.02
PTP4A1-203ENST00000473334 ZNF384Q8TF68 577 aa27.65■■■□□ 2.02
PTP4A1-203ENST00000473334 NSUN4Q96CB9 384 aaKnown RBP27.65■■■□□ 2.02
PTP4A1-203ENST00000473334 IDI2Q9BXS1 227 aa27.65■■■□□ 2.02
PTP4A1-203ENST00000473334 TLR7Q9NYK1 1049 aaKnown RBP27.65■■■□□ 2.02
PTP4A1-203ENST00000473334 RAI14Q9P0K7 980 aa27.65■■■□□ 2.02
PTP4A1-203ENST00000473334 LDHCP07864 332 aa27.64■■■□□ 2.02
PTP4A1-203ENST00000473334 OPTNQ96CV9 577 aa27.64■■■□□ 2.02
PTP4A1-203ENST00000473334 SNRKQ9NRH2 765 aa27.64■■■□□ 2.02
PTP4A1-203ENST00000473334 LRP2BPQ9P2M1 347 aa27.64■■■□□ 2.02
PTP4A1-203ENST00000473334 DOCK2Q92608 1830 aa27.64■■■□□ 2.01
PTP4A1-203ENST00000473334 GPR75-ASB3A0A0A6YYF3 556 aa27.63■■■□□ 2.01
PTP4A1-203ENST00000473334 CAPN15O75808 1086 aa27.63■■■□□ 2.01
PTP4A1-203ENST00000473334 SIRT2Q8IXJ6 389 aa27.63■■■□□ 2.01
PTP4A1-203ENST00000473334 WRNIP1Q96S55 665 aa27.63■■■□□ 2.01
PTP4A1-203ENST00000473334 ZNF341Q9BYN7 854 aa27.63■■■□□ 2.01
PTP4A1-203ENST00000473334 ENTPD3O75355 529 aa27.62■■■□□ 2.01
PTP4A1-203ENST00000473334 RGS3P49796 1198 aa27.62■■■□□ 2.01
PTP4A1-203ENST00000473334 TBC1D8O95759 1140 aa27.61■■■□□ 2.01
PTP4A1-203ENST00000473334 ALDH1A1P00352 501 aa27.61■■■□□ 2.01
PTP4A1-203ENST00000473334 MIGA2Q7L4E1 593 aa27.61■■■□□ 2.01
PTP4A1-203ENST00000473334 AACSQ86V21 672 aa27.61■■■□□ 2.01
PTP4A1-203ENST00000473334 IFNL1Q8IU54 200 aa27.61■■■□□ 2.01
PTP4A1-203ENST00000473334 ZFPM1Q8IX07 1006 aa27.61■■■□□ 2.01
PTP4A1-203ENST00000473334 RHPN1Q8TCX5 695 aa27.61■■■□□ 2.01
PTP4A1-203ENST00000473334 CFHR5Q9BXR6 569 aa27.61■■■□□ 2.01
PTP4A1-203ENST00000473334 MYO5AQ9Y4I1 1855 aaKnown RBP27.6■■■□□ 2.01
PTP4A1-203ENST00000473334 WDHD1O75717 1129 aaPredicted RBP27.6■■■□□ 2.01
PTP4A1-203ENST00000473334 CYP2E1P05181 493 aaPredicted RBP27.6■■■□□ 2.01
PTP4A1-203ENST00000473334 CNKSR2Q8WXI2 1034 aa27.6■■■□□ 2.01
PTP4A1-203ENST00000473334 SNCAIPQ9Y6H5 919 aa27.6■■■□□ 2.01
PTP4A1-203ENST00000473334 MAP4K4O95819 1239 aaPredicted RBP27.59■■■□□ 2.01
PTP4A1-203ENST00000473334 ZAP70P43403 619 aa27.59■■■□□ 2.01
PTP4A1-203ENST00000473334 RHBDL3P58872 404 aa27.59■■■□□ 2.01
PTP4A1-203ENST00000473334 ZKSCAN4Q969J2 545 aaPredicted RBP27.59■■■□□ 2.01
PTP4A1-203ENST00000473334 KIF1BPQ96EK5 621 aa27.59■■■□□ 2.01
PTP4A1-203ENST00000473334 IL1RAPL2Q9NP60 686 aa27.59■■■□□ 2.01
PTP4A1-203ENST00000473334 SPDYE5A6NIY4 337 aa27.58■■■□□ 2.01
PTP4A1-203ENST00000473334 OTUD5Q96G74 571 aa27.58■■■□□ 2.01
PTP4A1-203ENST00000473334 DDX4Q9NQI0 724 aaKnown RBP27.58■■■□□ 2.01
PTP4A1-203ENST00000473334 TESPA1A2RU30 521 aaPredicted RBP27.57■■■□□ 2
PTP4A1-203ENST00000473334 IGF2BP3O00425 579 aaKnown RBP eCLIP27.57■■■□□ 2
PTP4A1-203ENST00000473334 IGSF3O75054 1194 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms