RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 FZD1Q9UP38 647 aa19.17■□□□□ 0.66
MRPL55-226ENST00000473066 NOP58Q9Y2X3 529 aaKnown RBP19.17■□□□□ 0.66
MRPL55-226ENST00000473066 FPGT-TNNI3KV9GXZ4 949 aa19.17■□□□□ 0.66
MRPL55-226ENST00000473066 RPAP1Q9BWH6 1393 aaPredicted RBP19.17■□□□□ 0.66
MRPL55-226ENST00000473066 HMMRO75330 724 aa19.16■□□□□ 0.66
MRPL55-226ENST00000473066 ARID4AP29374 1257 aaPredicted RBP19.16■□□□□ 0.66
MRPL55-226ENST00000473066 HSP90AB4PQ58FF6 505 aa19.16■□□□□ 0.66
MRPL55-226ENST00000473066 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
MRPL55-226ENST00000473066 ANKRD13AQ8IZ07 590 aa19.16■□□□□ 0.66
MRPL55-226ENST00000473066 SPATA5Q8NB90 893 aa19.16■□□□□ 0.66
MRPL55-226ENST00000473066 CSRNP1Q96S65 589 aa19.16■□□□□ 0.66
MRPL55-226ENST00000473066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.16■□□□□ 0.66
MRPL55-226ENST00000473066 HMG20BQ9P0W2 317 aa19.15■□□□□ 0.66
MRPL55-226ENST00000473066 MYO5AQ9Y4I1 1855 aaKnown RBP19.14■□□□□ 0.65
MRPL55-226ENST00000473066 TRPA1O75762 1119 aa19.14■□□□□ 0.65
MRPL55-226ENST00000473066 DCAF15Q66K64 600 aa19.14■□□□□ 0.65
MRPL55-226ENST00000473066 TEPSINQ96N21 525 aa19.14■□□□□ 0.65
MRPL55-226ENST00000473066 DBNDD2Q9BQY9 259 aa19.14■□□□□ 0.65
MRPL55-226ENST00000473066 EXOC6BQ9Y2D4 811 aa19.14■□□□□ 0.65
MRPL55-226ENST00000473066 CSADQ9Y600 493 aa19.14■□□□□ 0.65
MRPL55-226ENST00000473066 USP2O75604 605 aaPredicted RBP19.13■□□□□ 0.65
MRPL55-226ENST00000473066 ZBTB48P10074 688 aaPredicted RBP19.13■□□□□ 0.65
MRPL55-226ENST00000473066 GSTO1P78417 241 aa19.13■□□□□ 0.65
MRPL55-226ENST00000473066 PDE3AQ14432 1141 aa19.13■□□□□ 0.65
MRPL55-226ENST00000473066 SPRYD7Q5W111 196 aa19.13■□□□□ 0.65
MRPL55-226ENST00000473066 CDC42EP5Q6NZY7 148 aa19.13■□□□□ 0.65
MRPL55-226ENST00000473066 RPAP2Q8IXW5 612 aaPredicted RBP19.13■□□□□ 0.65
MRPL55-226ENST00000473066 WNK4Q96J92 1243 aa19.13■□□□□ 0.65
MRPL55-226ENST00000473066 CLMNQ96JQ2 1002 aa19.13■□□□□ 0.65
MRPL55-226ENST00000473066 USP40Q9NVE5 1235 aa19.13■□□□□ 0.65
MRPL55-226ENST00000473066 RNF186Q9NXI6 227 aa19.13■□□□□ 0.65
MRPL55-226ENST00000473066 RAI14Q9P0K7 980 aa19.13■□□□□ 0.65
MRPL55-226ENST00000473066 MROH7-TTC4A0A0A0MT08 1334 aa19.12■□□□□ 0.65
MRPL55-226ENST00000473066 GAKO14976 1311 aa19.12■□□□□ 0.65
MRPL55-226ENST00000473066 MANSC4A6NHS7 340 aaPredicted RBP19.12■□□□□ 0.65
MRPL55-226ENST00000473066 LDHCP07864 332 aa19.12■□□□□ 0.65
MRPL55-226ENST00000473066 MCAMP43121 646 aa19.12■□□□□ 0.65
MRPL55-226ENST00000473066 PI16Q6UXB8 463 aa19.12■□□□□ 0.65
MRPL55-226ENST00000473066 CDAN1Q8IWY9 1227 aa19.12■□□□□ 0.65
MRPL55-226ENST00000473066 FAM151AQ8WW52 585 aa19.12■□□□□ 0.65
MRPL55-226ENST00000473066 LRP2BPQ9P2M1 347 aa19.12■□□□□ 0.65
MRPL55-226ENST00000473066 BTDP43251 543 aa19.11■□□□□ 0.65
MRPL55-226ENST00000473066 TCP10Q12799 353 aa19.11■□□□□ 0.65
MRPL55-226ENST00000473066 NOL10Q9BSC4 688 aaKnown RBP19.11■□□□□ 0.65
MRPL55-226ENST00000473066 ELP3Q9H9T3 547 aa19.11■□□□□ 0.65
MRPL55-226ENST00000473066 ZBTB40Q9NUA8 1239 aa19.11■□□□□ 0.65
MRPL55-226ENST00000473066 MAP3K9P80192 1104 aa19.1■□□□□ 0.65
MRPL55-226ENST00000473066 MECOMQ03112 1051 aa19.1■□□□□ 0.65
MRPL55-226ENST00000473066 YTHDC1Q96MU7 727 aaKnown RBP19.1■□□□□ 0.65
MRPL55-226ENST00000473066 TBC1D9Q6ZT07 1266 aa19.09■□□□□ 0.65
MRPL55-226ENST00000473066 AACSQ86V21 672 aa19.09■□□□□ 0.65
MRPL55-226ENST00000473066 WRNIP1Q96S55 665 aa19.09■□□□□ 0.65
MRPL55-226ENST00000473066 ZNF341Q9BYN7 854 aa19.09■□□□□ 0.65
MRPL55-226ENST00000473066 CCDC8Q9H0W5 538 aaPredicted RBP19.09■□□□□ 0.65
MRPL55-226ENST00000473066 SNRKQ9NRH2 765 aa19.09■□□□□ 0.65
MRPL55-226ENST00000473066 DBNLQ9UJU6 430 aaKnown RBP19.09■□□□□ 0.65
MRPL55-226ENST00000473066 CDK5RAP2Q96SN8 1893 aa19.08■□□□□ 0.65
MRPL55-226ENST00000473066 APBB1O00213 710 aa19.08■□□□□ 0.64
MRPL55-226ENST00000473066 CAPN15O75808 1086 aa19.08■□□□□ 0.64
MRPL55-226ENST00000473066 ALDH1A1P00352 501 aa19.08■□□□□ 0.64
MRPL55-226ENST00000473066 TM4SF4P48230 202 aa19.08■□□□□ 0.64
MRPL55-226ENST00000473066 INHBEP58166 350 aa19.08■□□□□ 0.64
MRPL55-226ENST00000473066 NFIAQ12857 509 aa19.08■□□□□ 0.64
MRPL55-226ENST00000473066 VGLL4Q14135 290 aa19.08■□□□□ 0.64
MRPL55-226ENST00000473066 ZSCAN29Q8IWY8 852 aaPredicted RBP19.08■□□□□ 0.64
MRPL55-226ENST00000473066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.08■□□□□ 0.643e-6■■■■□ 21.3
MRPL55-226ENST00000473066 OPTNQ96CV9 577 aa19.08■□□□□ 0.64
MRPL55-226ENST00000473066 KIF1BPQ96EK5 621 aa19.08■□□□□ 0.64
MRPL55-226ENST00000473066 FAM163AQ96GL9 167 aaPredicted RBP19.08■□□□□ 0.64
MRPL55-226ENST00000473066 ZNF512BQ96KM6 892 aaPredicted RBP19.08■□□□□ 0.64
MRPL55-226ENST00000473066 ENTPD3O75355 529 aa19.07■□□□□ 0.64
MRPL55-226ENST00000473066 RGS3P49796 1198 aa19.07■□□□□ 0.64
MRPL55-226ENST00000473066 C20orf194Q5TEA3 1177 aa19.07■□□□□ 0.64
MRPL55-226ENST00000473066 OTUD7BQ6GQQ9 843 aa19.07■□□□□ 0.64
MRPL55-226ENST00000473066 CLASRPQ8N2M8 674 aaKnown RBP19.07■□□□□ 0.64
MRPL55-226ENST00000473066 RHPN1Q8TCX5 695 aa19.07■□□□□ 0.64
MRPL55-226ENST00000473066 NSUN4Q96CB9 384 aaKnown RBP19.07■□□□□ 0.64
MRPL55-226ENST00000473066 EAF2Q96CJ1 260 aaPredicted RBP19.07■□□□□ 0.64
MRPL55-226ENST00000473066 IDI2Q9BXS1 227 aa19.07■□□□□ 0.64
MRPL55-226ENST00000473066 TLR7Q9NYK1 1049 aaKnown RBP19.07■□□□□ 0.64
MRPL55-226ENST00000473066 FOCADQ5VW36 1801 aa19.07■□□□□ 0.64
MRPL55-226ENST00000473066 MAP4K4O95819 1239 aaPredicted RBP19.06■□□□□ 0.64
MRPL55-226ENST00000473066 PICALMQ13492 652 aa19.06■□□□□ 0.64
MRPL55-226ENST00000473066 NAA16Q6N069 864 aaPredicted RBP19.06■□□□□ 0.64
MRPL55-226ENST00000473066 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.06■□□□□ 0.64
MRPL55-226ENST00000473066 IL1RAPL2Q9NP60 686 aa19.06■□□□□ 0.64
MRPL55-226ENST00000473066 FAM198AQ9UFP1 575 aa19.06■□□□□ 0.64
MRPL55-226ENST00000473066 RFX7Q2KHR2 1363 aa19.06■□□□□ 0.64
MRPL55-226ENST00000473066 DOCK1Q14185 1865 aa19.05■□□□□ 0.64
MRPL55-226ENST00000473066 GPR75-ASB3A0A0A6YYF3 556 aa19.05■□□□□ 0.64
MRPL55-226ENST00000473066 RAB11FIP3O75154 756 aa19.05■□□□□ 0.64
MRPL55-226ENST00000473066 OTUD5Q96G74 571 aa19.05■□□□□ 0.64
MRPL55-226ENST00000473066 BCL11AQ9H165 835 aa19.05■□□□□ 0.64
MRPL55-226ENST00000473066 IGSF3O75054 1194 aa19.04■□□□□ 0.64
MRPL55-226ENST00000473066 BAG3O95817 575 aa19.04■□□□□ 0.64
MRPL55-226ENST00000473066 IFIT2P09913 472 aaKnown RBP19.04■□□□□ 0.64
MRPL55-226ENST00000473066 ZAP70P43403 619 aa19.04■□□□□ 0.64
MRPL55-226ENST00000473066 MIGA2Q7L4E1 593 aa19.04■□□□□ 0.64
MRPL55-226ENST00000473066 ATAD5Q96QE3 1844 aa19.03■□□□□ 0.64
MRPL55-226ENST00000473066 SPDYE5A6NIY4 337 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms