RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 NKX2-3Q8TAU0 364 aa17.72■□□□□ 0.43
ABCF3-209ENST00000472608 DPF3Q92784 378 aa17.72■□□□□ 0.43
ABCF3-209ENST00000472608 COPRSQ9NQ92 184 aa17.72■□□□□ 0.43
ABCF3-209ENST00000472608 MROH5Q6ZUA9 1318 aa17.72■□□□□ 0.43
ABCF3-209ENST00000472608 A0A1W2PPC1 479 aa17.71■□□□□ 0.43
ABCF3-209ENST00000472608 SNAP23O00161 211 aa17.71■□□□□ 0.43
ABCF3-209ENST00000472608 KCNJ4P48050 445 aa17.71■□□□□ 0.43
ABCF3-209ENST00000472608 KIF22Q14807 665 aa17.71■□□□□ 0.43
ABCF3-209ENST00000472608 MTFR1Q15390 333 aa17.71■□□□□ 0.43
ABCF3-209ENST00000472608 ZNF70Q9UC06 446 aaPredicted RBP17.71■□□□□ 0.43
ABCF3-209ENST00000472608 COG6Q9Y2V7 657 aa17.71■□□□□ 0.43
ABCF3-209ENST00000472608 SPDYE5A6NIY4 337 aa17.7■□□□□ 0.42
ABCF3-209ENST00000472608 EYA2O00167 538 aa17.7■□□□□ 0.42
ABCF3-209ENST00000472608 SRGAP3O43295 1099 aa17.7■□□□□ 0.42
ABCF3-209ENST00000472608 WDHD1O75717 1129 aaPredicted RBP17.7■□□□□ 0.42
ABCF3-209ENST00000472608 CIAO1O76071 339 aa17.7■□□□□ 0.42
ABCF3-209ENST00000472608 GJA8P48165 433 aa17.7■□□□□ 0.42
ABCF3-209ENST00000472608 RRP1P56182 461 aaKnown RBP17.7■□□□□ 0.42
ABCF3-209ENST00000472608 ATP8B2P98198 1209 aa17.7■□□□□ 0.42
ABCF3-209ENST00000472608 CDAN1Q8IWY9 1227 aa17.7■□□□□ 0.42
ABCF3-209ENST00000472608 HTATIP2Q9BUP3 242 aa17.7■□□□□ 0.42
ABCF3-209ENST00000472608 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
ABCF3-209ENST00000472608 FAM205AQ6ZU69 1335 aa17.7■□□□□ 0.42
ABCF3-209ENST00000472608 GJB1P08034 283 aa17.69■□□□□ 0.42
ABCF3-209ENST00000472608 UBE4AQ14139 1066 aa17.69■□□□□ 0.42
ABCF3-209ENST00000472608 LRRC24Q50LG9 513 aa17.69■□□□□ 0.42
ABCF3-209ENST00000472608 ZNF804AQ7Z570 1209 aa17.69■□□□□ 0.42
ABCF3-209ENST00000472608 ZBTB40Q9NUA8 1239 aa17.69■□□□□ 0.42
ABCF3-209ENST00000472608 SERPINA10Q9UK55 444 aa17.69■□□□□ 0.42
ABCF3-209ENST00000472608 BTBD19C9JJ37 291 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 TAF5LO75529 589 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 CETPP11597 493 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 MNX1P50219 401 aaPredicted RBP17.68■□□□□ 0.42
ABCF3-209ENST00000472608 C20orf194Q5TEA3 1177 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 C17orf99Q6UX52 265 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 HELBQ8NG08 1087 aaPredicted RBP17.68■□□□□ 0.42
ABCF3-209ENST00000472608 KLHDC4Q8TBB5 520 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 SSH3Q8TE77 659 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 SRRDQ9UH36 339 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 NR2E3Q9Y5X4 410 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 CSADQ9Y600 493 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 ZSWIM8A7E2V4 1837 aa17.68■□□□□ 0.42
ABCF3-209ENST00000472608 PDE8BO95263 885 aa17.67■□□□□ 0.42
ABCF3-209ENST00000472608 CTGFP29279 349 aa17.67■□□□□ 0.42
ABCF3-209ENST00000472608 IL15P40933 162 aaPredicted RBP17.67■□□□□ 0.42
ABCF3-209ENST00000472608 RBM5P52756 815 aaKnown RBP eCLIP17.67■□□□□ 0.42
ABCF3-209ENST00000472608 POLA2Q14181 598 aa17.67■□□□□ 0.42
ABCF3-209ENST00000472608 ATG9AQ7Z3C6 839 aa17.67■□□□□ 0.42
ABCF3-209ENST00000472608 VGLL2Q8N8G2 317 aa17.67■□□□□ 0.42
ABCF3-209ENST00000472608 TDRD3Q9H7E2 651 aaKnown RBP17.67■□□□□ 0.42
ABCF3-209ENST00000472608 SNCAIPQ9Y6H5 919 aa17.67■□□□□ 0.42
ABCF3-209ENST00000472608 PNMA6EA0A0J9YXQ4 647 aa17.66■□□□□ 0.42
ABCF3-209ENST00000472608 METTL24Q5JXM2 366 aa17.66■□□□□ 0.42
ABCF3-209ENST00000472608 ERO1BQ86YB8 467 aa17.66■□□□□ 0.42
ABCF3-209ENST00000472608 RPAP2Q8IXW5 612 aaPredicted RBP17.66■□□□□ 0.42
ABCF3-209ENST00000472608 TMEM39BQ9GZU3 492 aa17.66■□□□□ 0.42
ABCF3-209ENST00000472608 SOX1O00570 391 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-209ENST00000472608 GRK4P32298 578 aa17.65■□□□□ 0.42
ABCF3-209ENST00000472608 SNAPC2Q13487 334 aa17.65■□□□□ 0.42
ABCF3-209ENST00000472608 CEP85Q6P2H3 762 aa17.65■□□□□ 0.42
ABCF3-209ENST00000472608 TDRD7Q8NHU6 1098 aaKnown RBP17.65■□□□□ 0.42
ABCF3-209ENST00000472608 TRIM47Q96LD4 638 aa17.65■□□□□ 0.42
ABCF3-209ENST00000472608 IRF6O14896 467 aa17.64■□□□□ 0.41
ABCF3-209ENST00000472608 CCL5P13501 91 aa17.64■□□□□ 0.41
ABCF3-209ENST00000472608 OSBPP22059 807 aa17.64■□□□□ 0.41
ABCF3-209ENST00000472608 HOXD10P28358 340 aa17.64■□□□□ 0.41
ABCF3-209ENST00000472608 TNNI2P48788 182 aa17.64■□□□□ 0.41
ABCF3-209ENST00000472608 PPIL2Q13356 520 aa17.64■□□□□ 0.41
ABCF3-209ENST00000472608 C1orf115Q9H7X2 142 aa17.64■□□□□ 0.41
ABCF3-209ENST00000472608 CEP126Q9P2H0 1117 aa17.64■□□□□ 0.41
ABCF3-209ENST00000472608 PA2G4Q9UQ80 394 aaKnown RBP17.64■□□□□ 0.41
ABCF3-209ENST00000472608 JAG2Q9Y219 1238 aa17.64■□□□□ 0.41
ABCF3-209ENST00000472608 A0A1B0GUL6 1792 aa17.63■□□□□ 0.41
ABCF3-209ENST00000472608 TCP10L2B9ZVM9 353 aa17.63■□□□□ 0.41
ABCF3-209ENST00000472608 CAPN2P17655 700 aa17.63■□□□□ 0.41
ABCF3-209ENST00000472608 FGFR2P21802 821 aa17.63■□□□□ 0.41
ABCF3-209ENST00000472608 PSMC4P43686 418 aa17.63■□□□□ 0.41
ABCF3-209ENST00000472608 MFSD14BQ5SR56 506 aa17.63■□□□□ 0.41
ABCF3-209ENST00000472608 GPR153Q6NV75 609 aa17.63■□□□□ 0.41
ABCF3-209ENST00000472608 SIL1Q9H173 461 aa17.63■□□□□ 0.41
ABCF3-209ENST00000472608 TTF2Q9UNY4 1162 aaKnown RBP17.63■□□□□ 0.41
ABCF3-209ENST00000472608 NOP58Q9Y2X3 529 aaKnown RBP17.63■□□□□ 0.41
ABCF3-209ENST00000472608 ADGRA2Q96PE1 1338 aa17.63■□□□□ 0.41
ABCF3-209ENST00000472608 ARAP2Q8WZ64 1704 aa17.63■□□□□ 0.41
ABCF3-209ENST00000472608 PUM3Q15397 648 aaKnown RBP17.62■□□□□ 0.41
ABCF3-209ENST00000472608 CRKP46108 304 aa17.61■□□□□ 0.41
ABCF3-209ENST00000472608 G3BP1Q13283 466 aaKnown RBP eCLIP17.61■□□□□ 0.41
ABCF3-209ENST00000472608 ANKRD23Q86SG2 305 aa17.61■□□□□ 0.41
ABCF3-209ENST00000472608 RAET1EQ8TD07 263 aa17.61■□□□□ 0.41
ABCF3-209ENST00000472608 U2AF1L4Q8WU68 220 aaKnown RBP17.61■□□□□ 0.41
ABCF3-209ENST00000472608 LPIN2Q92539 896 aa17.61■□□□□ 0.41
ABCF3-209ENST00000472608 LRCH3Q96II8 777 aa17.61■□□□□ 0.41
ABCF3-209ENST00000472608 RNF208Q9H0X6 261 aa17.61■□□□□ 0.41
ABCF3-209ENST00000472608 CPA4Q9UI42 421 aa17.61■□□□□ 0.41
ABCF3-209ENST00000472608 HMMRO75330 724 aa17.6■□□□□ 0.41
ABCF3-209ENST00000472608 FARP2O94887 1054 aaPredicted RBP17.6■□□□□ 0.41
ABCF3-209ENST00000472608 IFIT1P09914 478 aaKnown RBP17.6■□□□□ 0.41
ABCF3-209ENST00000472608 UBXN2AP68543 259 aa17.6■□□□□ 0.41
ABCF3-209ENST00000472608 HDLBPQ00341 1268 aaKnown RBP17.6■□□□□ 0.41
ABCF3-209ENST00000472608 PPATQ06203 517 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms