RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 FAM217BQ9NTX9 383 aaPredicted RBP17.57■□□□□ 0.4
UBXN11-213ENST00000472155 PCDHA7Q9UN72 937 aa17.57■□□□□ 0.4
UBXN11-213ENST00000472155 RANBP6O60518 1105 aaKnown RBP17.57■□□□□ 0.4
UBXN11-213ENST00000472155 EVX2Q03828 476 aa17.57■□□□□ 0.4
UBXN11-213ENST00000472155 FAM200AQ8TCP9 573 aa17.57■□□□□ 0.4
UBXN11-213ENST00000472155 NGLY1Q96IV0 654 aa17.57■□□□□ 0.4
UBXN11-213ENST00000472155 LRP2BPQ9P2M1 347 aa17.57■□□□□ 0.4
UBXN11-213ENST00000472155 DOCK2Q92608 1830 aa17.57■□□□□ 0.4
UBXN11-213ENST00000472155 A0A1B0GVL5 298 aa17.56■□□□□ 0.4
UBXN11-213ENST00000472155 METAP2P50579 478 aaKnown RBP eCLIP17.56■□□□□ 0.4
UBXN11-213ENST00000472155 CMTR1Q8N1G2 835 aaKnown RBP17.56■□□□□ 0.4
UBXN11-213ENST00000472155 SLC4A4Q9Y6R1 1079 aa17.56■□□□□ 0.4
UBXN11-213ENST00000472155 COL5A3P25940 1745 aaPredicted RBP17.56■□□□□ 0.4
UBXN11-213ENST00000472155 OFD1O75665 1012 aa17.56■□□□□ 0.4
UBXN11-213ENST00000472155 C11orf57Q6ZUT1 292 aaPredicted RBP17.56■□□□□ 0.4
UBXN11-213ENST00000472155 ENGASEQ8NFI3 743 aa17.56■□□□□ 0.4
UBXN11-213ENST00000472155 FSIP1Q8NA03 581 aa17.55■□□□□ 0.4
UBXN11-213ENST00000472155 ZNF384Q8TF68 577 aa17.55■□□□□ 0.4
UBXN11-213ENST00000472155 TOMM22Q9NS69 142 aa17.55■□□□□ 0.4
UBXN11-213ENST00000472155 KIF3AQ9Y496 699 aa17.55■□□□□ 0.4
UBXN11-213ENST00000472155 CYP2D7A0A087X1C5 515 aa17.55■□□□□ 0.4
UBXN11-213ENST00000472155 TMEM67Q5HYA8 995 aa17.55■□□□□ 0.4
UBXN11-213ENST00000472155 CCDC82Q8N4S0 544 aa17.55■□□□□ 0.4
UBXN11-213ENST00000472155 JAG2Q9Y219 1238 aa17.55■□□□□ 0.4
UBXN11-213ENST00000472155 KIF23Q02241 960 aaPredicted RBP17.54■□□□□ 0.4
UBXN11-213ENST00000472155 NFXL1Q6ZNB6 911 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 LINC00301Q8NCQ3 95 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 ZMYM6O95789 1325 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 CYP7A1P22680 504 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 GUCY1A2P33402 732 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 TDO2P48775 406 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 DYNLL1P63167 89 aaKnown RBP17.54■□□□□ 0.4
UBXN11-213ENST00000472155 NTRK3Q16288 839 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 MYSM1Q5VVJ2 828 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 ZNF396Q96N95 335 aaPredicted RBP17.54■□□□□ 0.4
UBXN11-213ENST00000472155 ALG1Q9BT22 464 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 KCNF1Q9H3M0 494 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 MINPP1Q9UNW1 487 aa17.54■□□□□ 0.4
UBXN11-213ENST00000472155 IFIT3O14879 490 aaKnown RBP17.53■□□□□ 0.4
UBXN11-213ENST00000472155 NDUFA8P51970 172 aa17.53■□□□□ 0.4
UBXN11-213ENST00000472155 ANKRD18AQ8IVF6 992 aa17.53■□□□□ 0.4
UBXN11-213ENST00000472155 SMARCC1Q92922 1105 aaPredicted RBP17.53■□□□□ 0.4
UBXN11-213ENST00000472155 R3HCC1Q9Y3T6 440 aaKnown RBP17.53■□□□□ 0.4
UBXN11-213ENST00000472155 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
UBXN11-213ENST00000472155 ALX1Q15699 326 aa17.53■□□□□ 0.4
UBXN11-213ENST00000472155 SASS6Q6UVJ0 657 aa17.53■□□□□ 0.4
UBXN11-213ENST00000472155 CHD4Q14839 1912 aa17.53■□□□□ 0.4
UBXN11-213ENST00000472155 RTL9Q8NET4 1388 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.4
UBXN11-213ENST00000472155 GTF2E1P29083 439 aaPredicted RBP17.52■□□□□ 0.4
UBXN11-213ENST00000472155 MARCKSP29966 332 aaPredicted RBP17.52■□□□□ 0.4
UBXN11-213ENST00000472155 ZNF165P49910 485 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 AKNAD1Q5T1N1 836 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 RTEL1Q9NZ71 1219 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 RAI14Q9P0K7 980 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 ZNF652Q9Y2D9 606 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 WDR19Q8NEZ3 1342 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 BCORQ6W2J9 1755 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 ZBTB43O43298 467 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 TFCP2L1Q9NZI6 479 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 NRBP1Q9UHY1 535 aa17.52■□□□□ 0.4
UBXN11-213ENST00000472155 CICQ96RK0 1608 aaPredicted RBP17.52■□□□□ 0.4
UBXN11-213ENST00000472155 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 MINDY4BA8MYZ0 360 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 KRT40Q6A162 431 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 FAM84BQ96KN1 310 aaPredicted RBP17.51■□□□□ 0.39
UBXN11-213ENST00000472155 CDC5LQ99459 802 aaKnown RBP17.51■□□□□ 0.39
UBXN11-213ENST00000472155 LAMB2P55268 1798 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 GNPATO15228 680 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 WDHD1O75717 1129 aaPredicted RBP17.51■□□□□ 0.39
UBXN11-213ENST00000472155 STK38Q15208 465 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 ECM29Q5VYK3 1845 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 ZNF804BA4D1E1 1349 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 SF3B3Q15393 1217 aaKnown RBP17.51■□□□□ 0.39
UBXN11-213ENST00000472155 CLEC4GQ6UXB4 293 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 CCDC73Q6ZRK6 1079 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 MFSD6Q6ZSS7 791 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 VPS37DQ86XT2 251 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 FMR1NBQ8N0W7 255 aaPredicted RBP17.51■□□□□ 0.39
UBXN11-213ENST00000472155 PYCARDQ9ULZ3 195 aa17.51■□□□□ 0.39
UBXN11-213ENST00000472155 BAZ2AQ9UIF9 1905 aaKnown RBP17.5■□□□□ 0.39
UBXN11-213ENST00000472155 FAM160A1Q05DH4 1040 aa17.5■□□□□ 0.39
UBXN11-213ENST00000472155 TXNRD3Q86VQ6 643 aa17.5■□□□□ 0.39
UBXN11-213ENST00000472155 SLC26A6Q9BXS9 759 aa17.5■□□□□ 0.39
UBXN11-213ENST00000472155 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
UBXN11-213ENST00000472155 MROH7-TTC4A0A0A0MT08 1334 aa17.5■□□□□ 0.39
UBXN11-213ENST00000472155 PRDM1O75626 825 aa17.5■□□□□ 0.39
UBXN11-213ENST00000472155 TMEM87BQ96K49 555 aa17.5■□□□□ 0.39
UBXN11-213ENST00000472155 UBAP1LF5GYI3 381 aa17.49■□□□□ 0.39
UBXN11-213ENST00000472155 SPTLC2O15270 562 aa17.49■□□□□ 0.39
UBXN11-213ENST00000472155 SGMS1Q86VZ5 419 aa17.49■□□□□ 0.39
UBXN11-213ENST00000472155 SLC12A7Q9Y666 1083 aa17.49■□□□□ 0.39
UBXN11-213ENST00000472155 A0A1B0GUL6 1792 aa17.49■□□□□ 0.39
UBXN11-213ENST00000472155 TOM1O60784 492 aa17.49■□□□□ 0.39
UBXN11-213ENST00000472155 KINO60870 393 aaKnown RBP17.49■□□□□ 0.39
UBXN11-213ENST00000472155 PTGS1P23219 599 aa17.49■□□□□ 0.39
UBXN11-213ENST00000472155 IQCB1Q15051 598 aa17.49■□□□□ 0.39
UBXN11-213ENST00000472155 SF3A1Q15459 793 aaKnown RBP17.49■□□□□ 0.39
UBXN11-213ENST00000472155 RIOK1Q9BRS2 568 aaKnown RBP17.49■□□□□ 0.39
UBXN11-213ENST00000472155 KCNJ14Q9UNX9 436 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms