RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 AGLP35573 1532 aa10.07□□□□□ -0.8
SCN9A-206ENST00000472119 CROCC2H7BZ55 1655 aa10.07□□□□□ -0.8
SCN9A-206ENST00000472119 PIP4K2BP78356 416 aa10.07□□□□□ -0.8
SCN9A-206ENST00000472119 CPSF6Q16630 551 aaKnown RBP eCLIP10.07□□□□□ -0.8
SCN9A-206ENST00000472119 ZNF648Q5T619 568 aaPredicted RBP10.07□□□□□ -0.8
SCN9A-206ENST00000472119 NCAPG2Q86XI2 1143 aa10.07□□□□□ -0.8
SCN9A-206ENST00000472119 SHISA5Q8N114 240 aa10.07□□□□□ -0.8
SCN9A-206ENST00000472119 FLCNQ8NFG4 579 aa10.07□□□□□ -0.8
SCN9A-206ENST00000472119 SLC7A3Q8WY07 619 aa10.07□□□□□ -0.8
SCN9A-206ENST00000472119 PIK3R5Q8WYR1 880 aa10.07□□□□□ -0.8
SCN9A-206ENST00000472119 ARXQ96QS3 562 aa10.07□□□□□ -0.8
SCN9A-206ENST00000472119 POP1Q99575 1024 aaKnown RBP10.07□□□□□ -0.8
SCN9A-206ENST00000472119 ADGBQ8N7X0 1667 aa10.06□□□□□ -0.8
SCN9A-206ENST00000472119 PLXNC1O60486 1568 aa10.06□□□□□ -0.8
SCN9A-206ENST00000472119 ADGRL2O95490 1459 aa10.06□□□□□ -0.8
SCN9A-206ENST00000472119 KIF4AO95239 1232 aa10.06□□□□□ -0.8
SCN9A-206ENST00000472119 NFKBIBQ15653 356 aa10.06□□□□□ -0.8
SCN9A-206ENST00000472119 ADAM19Q9H013 955 aa10.06□□□□□ -0.8
SCN9A-206ENST00000472119 VRTNQ9H8Y1 702 aa10.06□□□□□ -0.8
SCN9A-206ENST00000472119 BCORL1Q5H9F3 1711 aa10.06□□□□□ -0.8
SCN9A-206ENST00000472119 DUOX2Q9NRD8 1548 aa10.06□□□□□ -0.8
SCN9A-206ENST00000472119 ROCK1Q13464 1354 aa10.05□□□□□ -0.8
SCN9A-206ENST00000472119 CYP26A1O43174 497 aa10.05□□□□□ -0.8
SCN9A-206ENST00000472119 CYP2E1P05181 493 aaPredicted RBP10.05□□□□□ -0.8
SCN9A-206ENST00000472119 BRD2P25440 801 aaKnown RBP10.05□□□□□ -0.8
SCN9A-206ENST00000472119 CEBPAP49715 358 aaPredicted RBP10.05□□□□□ -0.8
SCN9A-206ENST00000472119 FKBP5Q13451 457 aaPredicted RBP10.05□□□□□ -0.8
SCN9A-206ENST00000472119 WNT8BQ93098 351 aa10.05□□□□□ -0.8
SCN9A-206ENST00000472119 OSGEPQ9NPF4 335 aa10.05□□□□□ -0.8
SCN9A-206ENST00000472119 BSDC1Q9NW68 430 aaPredicted RBP10.05□□□□□ -0.8
SCN9A-206ENST00000472119 ADAMTSL3P82987 1691 aa10.04□□□□□ -0.8
SCN9A-206ENST00000472119 ZNF124Q15973 351 aa10.04□□□□□ -0.8
SCN9A-206ENST00000472119 C12orf50Q8NA57 414 aaPredicted RBP10.04□□□□□ -0.8
SCN9A-206ENST00000472119 AGBL5Q8NDL9 886 aa10.04□□□□□ -0.8
SCN9A-206ENST00000472119 METTL22Q9BUU2 404 aaPredicted RBP10.04□□□□□ -0.8
SCN9A-206ENST00000472119 FAM13BQ9NYF5 915 aa10.04□□□□□ -0.8
SCN9A-206ENST00000472119 FNDC3AQ9Y2H6 1198 aaKnown RBP10.04□□□□□ -0.8
SCN9A-206ENST00000472119 ANKRD50Q9ULJ7 1429 aa10.04□□□□□ -0.8
SCN9A-206ENST00000472119 WASHC2CQ9Y4E1 1318 aa10.04□□□□□ -0.8
SCN9A-206ENST00000472119 FAM95CA0A1B0GW59 222 aa10.03□□□□□ -0.8
SCN9A-206ENST00000472119 FBLN7Q53RD9 439 aa10.03□□□□□ -0.8
SCN9A-206ENST00000472119 PAOXQ6QHF9 649 aa10.03□□□□□ -0.8
SCN9A-206ENST00000472119 CEP120Q8N960 986 aa10.03□□□□□ -0.8
SCN9A-206ENST00000472119 ERBINQ96RT1 1412 aa10.03□□□□□ -0.8
SCN9A-206ENST00000472119 MADDQ8WXG6 1647 aa10.03□□□□□ -0.8
SCN9A-206ENST00000472119 FAM26DQ5JW98 314 aa10.02□□□□□ -0.81
SCN9A-206ENST00000472119 NUTM2GQ5VZR2 741 aa10.02□□□□□ -0.81
SCN9A-206ENST00000472119 KRTAP4-11Q9BYQ6 195 aa10.02□□□□□ -0.81
SCN9A-206ENST00000472119 PPP1R12CQ9BZL4 782 aa10.02□□□□□ -0.81
SCN9A-206ENST00000472119 SAP130Q9H0E3 1048 aa10.02□□□□□ -0.81
SCN9A-206ENST00000472119 ABI2Q9NYB9 513 aaPredicted RBP10.02□□□□□ -0.81
SCN9A-206ENST00000472119 PTPRMP28827 1452 aa10.02□□□□□ -0.81
SCN9A-206ENST00000472119 MEGF11A6BM72 1044 aa10.01□□□□□ -0.81
SCN9A-206ENST00000472119 PAK6Q9NQU5 681 aaPredicted RBP10.01□□□□□ -0.81
SCN9A-206ENST00000472119 NAIPQ13075 1403 aa10□□□□□ -0.81
SCN9A-206ENST00000472119 ARL4DP49703 201 aa10□□□□□ -0.81
SCN9A-206ENST00000472119 FAM200AQ8TCP9 573 aa10□□□□□ -0.81
SCN9A-206ENST00000472119 TBC1D32Q96NH3 1257 aa10□□□□□ -0.81
SCN9A-206ENST00000472119 ZMYM3Q14202 1370 aa10□□□□□ -0.81
SCN9A-206ENST00000472119 RIMS1Q86UR5 1692 aaKnown RBP9.99□□□□□ -0.81
SCN9A-206ENST00000472119 DBX1A6NMT0 343 aa9.99□□□□□ -0.81
SCN9A-206ENST00000472119 PAPLNO95428 1278 aa9.99□□□□□ -0.81
SCN9A-206ENST00000472119 LMOD1P29536 600 aaPredicted RBP9.99□□□□□ -0.81
SCN9A-206ENST00000472119 USP11P51784 963 aa9.99□□□□□ -0.81
SCN9A-206ENST00000472119 C16orf46Q6P387 395 aa9.99□□□□□ -0.81
SCN9A-206ENST00000472119 SPOCD1Q6ZMY3 1216 aa9.99□□□□□ -0.81
SCN9A-206ENST00000472119 FBLIM1Q8WUP2 373 aa9.99□□□□□ -0.81
SCN9A-206ENST00000472119 PRIMPOLQ96LW4 560 aa9.99□□□□□ -0.81
SCN9A-206ENST00000472119 KANSL3Q9P2N6 904 aa9.99□□□□□ -0.81
SCN9A-206ENST00000472119 CNTLNQ9NXG0 1405 aa9.99□□□□□ -0.81
SCN9A-206ENST00000472119 FER1L4A9Z1Z3 1794 aa9.98□□□□□ -0.81
SCN9A-206ENST00000472119 EIF2AK4Q9P2K8 1649 aaKnown RBP9.98□□□□□ -0.81
SCN9A-206ENST00000472119 ADMP35318 185 aa9.98□□□□□ -0.81
SCN9A-206ENST00000472119 FLIIQ13045 1269 aa9.98□□□□□ -0.81
SCN9A-206ENST00000472119 HGSNATQ68CP4 663 aa9.98□□□□□ -0.81
SCN9A-206ENST00000472119 GPR152Q8TDT2 470 aa9.98□□□□□ -0.81
SCN9A-206ENST00000472119 CYP4F12Q9HCS2 524 aa9.98□□□□□ -0.81
SCN9A-206ENST00000472119 KANK1Q14678 1352 aa9.98□□□□□ -0.81
SCN9A-206ENST00000472119 HFM1A2PYH4 1435 aa9.98□□□□□ -0.81
SCN9A-206ENST00000472119 ZAP70P43403 619 aa9.97□□□□□ -0.81
SCN9A-206ENST00000472119 C19orf57Q0VDD7 668 aa9.97□□□□□ -0.81
SCN9A-206ENST00000472119 USP26Q9BXU7 913 aa9.97□□□□□ -0.81
SCN9A-206ENST00000472119 NUP155O75694 1391 aa9.97□□□□□ -0.81
SCN9A-206ENST00000472119 MROH1Q8NDA8 1641 aa9.96□□□□□ -0.81
SCN9A-206ENST00000472119 RNF17Q9BXT8 1623 aaKnown RBP9.96□□□□□ -0.81
SCN9A-206ENST00000472119 ACPPP15309 386 aa9.96□□□□□ -0.82
SCN9A-206ENST00000472119 TRIM26Q12899 539 aaPredicted RBP9.96□□□□□ -0.82
SCN9A-206ENST00000472119 CDPF1Q6NVV7 123 aa9.96□□□□□ -0.82
SCN9A-206ENST00000472119 SMG8Q8ND04 991 aaKnown RBP9.96□□□□□ -0.82
SCN9A-206ENST00000472119 TMPRSS13Q9BYE2 586 aa9.96□□□□□ -0.82
SCN9A-206ENST00000472119 LRRC4CQ9HCJ2 640 aa9.96□□□□□ -0.82
SCN9A-206ENST00000472119 ABCC3O15438 1527 aa9.96□□□□□ -0.82
SCN9A-206ENST00000472119 CLTCQ00610 1675 aaKnown RBP9.96□□□□□ -0.82
SCN9A-206ENST00000472119 FAM170BA6NMN3 283 aa9.95□□□□□ -0.82
SCN9A-206ENST00000472119 TIAF1O95411 115 aa9.95□□□□□ -0.82
SCN9A-206ENST00000472119 ZAR1Q86SH2 424 aa9.95□□□□□ -0.82
SCN9A-206ENST00000472119 SETD5Q9C0A6 1442 aa9.95□□□□□ -0.82
SCN9A-206ENST00000472119 KDM5DQ9BY66 1539 aa9.95□□□□□ -0.82
SCN9A-206ENST00000472119 PRDM15P57071 1507 aaPredicted RBP9.94□□□□□ -0.82
SCN9A-206ENST00000472119 DRD2P14416 443 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms