RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 CC2D2BQ6DHV5 1058 aa13.98□□□□□ -0.17
IRF1-208ENST00000472045 TTLL6Q8N841 843 aa13.98□□□□□ -0.17
IRF1-208ENST00000472045 OVOS2A0A0G2JMS6 1433 aa13.98□□□□□ -0.17
IRF1-208ENST00000472045 OVOS2A0A0J9YW53 1432 aa13.98□□□□□ -0.17
IRF1-208ENST00000472045 OVOS2Q6IE36 1432 aa13.98□□□□□ -0.17
IRF1-208ENST00000472045 FAM227BQ96M60 508 aa13.98□□□□□ -0.17
IRF1-208ENST00000472045 PLEKHF1Q96S99 279 aa13.98□□□□□ -0.17
IRF1-208ENST00000472045 MMRN2Q9H8L6 949 aa13.98□□□□□ -0.17
IRF1-208ENST00000472045 TOP1P11387 765 aaKnown RBP13.97□□□□□ -0.17
IRF1-208ENST00000472045 NPR1P16066 1061 aa13.97□□□□□ -0.17
IRF1-208ENST00000472045 HSP90AA2PQ14568 343 aaPredicted RBP13.97□□□□□ -0.17
IRF1-208ENST00000472045 LRRC24Q50LG9 513 aa13.97□□□□□ -0.17
IRF1-208ENST00000472045 TNPO1Q92973 898 aaKnown RBP13.97□□□□□ -0.17
IRF1-208ENST00000472045 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
IRF1-208ENST00000472045 MARCKSP29966 332 aaPredicted RBP13.97□□□□□ -0.17
IRF1-208ENST00000472045 PABPC4Q13310 644 aaKnown RBP eCLIP13.97□□□□□ -0.17
IRF1-208ENST00000472045 NUP88Q99567 741 aaPredicted RBP13.97□□□□□ -0.17
IRF1-208ENST00000472045 STX1AQ16623 288 aa13.97□□□□□ -0.17
IRF1-208ENST00000472045 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
IRF1-208ENST00000472045 CLTCL1P53675 1640 aa13.97□□□□□ -0.17
IRF1-208ENST00000472045 PRAMEF22A3QJZ6 481 aa13.97□□□□□ -0.17
IRF1-208ENST00000472045 NOP56O00567 594 aaKnown RBP13.97□□□□□ -0.17
IRF1-208ENST00000472045 MYCLP12524 364 aaPredicted RBP13.97□□□□□ -0.17
IRF1-208ENST00000472045 SFPQP23246 707 aaKnown RBP eCLIP13.97□□□□□ -0.17
IRF1-208ENST00000472045 BTDP43251 543 aa13.97□□□□□ -0.17
IRF1-208ENST00000472045 TFAP4Q01664 338 aa13.97□□□□□ -0.17
IRF1-208ENST00000472045 RRAGBQ5VZM2 374 aa13.97□□□□□ -0.17
IRF1-208ENST00000472045 HOMER2Q9NSB8 354 aa13.97□□□□□ -0.17
IRF1-208ENST00000472045 ANGEL1Q9UNK9 670 aaKnown RBP13.97□□□□□ -0.17
IRF1-208ENST00000472045 CYP27B1O15528 508 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 SLC5A4Q9NY91 659 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 ZBTB7AO95365 584 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 SKIDA1Q1XH10 827 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 LETM2Q2VYF4 491 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 DTHD1Q6ZMT9 781 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 RTKN2Q8IZC4 609 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 PAGR1Q9BTK6 254 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.96□□□□□ -0.17
IRF1-208ENST00000472045 DBNDD1Q9H9R9 158 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 GRPEL1Q9HAV7 217 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 PIM2Q9P1W9 311 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 CLIP2Q9UDT6 1046 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 AXIN2Q9Y2T1 843 aa13.96□□□□□ -0.17
IRF1-208ENST00000472045 SLC27A2O14975 620 aa13.96□□□□□ -0.18
IRF1-208ENST00000472045 PDE8BO95263 885 aa13.96□□□□□ -0.18
IRF1-208ENST00000472045 SLC27A3Q5K4L6 730 aa13.96□□□□□ -0.18
IRF1-208ENST00000472045 ISM2Q6H9L7 571 aa13.96□□□□□ -0.18
IRF1-208ENST00000472045 NLRP10Q86W26 655 aa13.96□□□□□ -0.18
IRF1-208ENST00000472045 PTPRMP28827 1452 aa13.96□□□□□ -0.18
IRF1-208ENST00000472045 DEXIO95424 95 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 YEATS4O95619 227 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 UBE2HP62256 183 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 GADL1Q6ZQY3 521 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 SSH3Q8TE77 659 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 ABCC4O15439 1325 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 PATL2C9JE40 543 aaKnown RBP13.95□□□□□ -0.18
IRF1-208ENST00000472045 OTUD7BQ6GQQ9 843 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 IQCEQ6IPM2 695 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 CHURC1Q8WUH1 139 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 MRPS27Q92552 414 aaKnown RBP13.95□□□□□ -0.18
IRF1-208ENST00000472045 USP17L12C9JPN9 530 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 USP17L21D6R901 530 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 APBB1IPQ7Z5R6 666 aaPredicted RBP13.95□□□□□ -0.18
IRF1-208ENST00000472045 MASTLQ96GX5 879 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 LZTS2Q9BRK4 669 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 IMPG2Q9BZV3 1241 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 C1orf167Q5SNV9 1468 aa13.95□□□□□ -0.18
IRF1-208ENST00000472045 RPS6KB1P23443 525 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 KIFC2Q96AC6 838 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 SEC31BQ9NQW1 1179 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
IRF1-208ENST00000472045 CLTCQ00610 1675 aaKnown RBP13.94□□□□□ -0.18
IRF1-208ENST00000472045 NEFHP12036 1026 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 EN1Q05925 392 aaPredicted RBP13.94□□□□□ -0.18
IRF1-208ENST00000472045 PPARAQ07869 468 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 USH1GQ495M9 461 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 CPLX3Q8WVH0 158 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 DHX58Q96C10 678 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 SEMA3EO15041 775 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 SPTLC2O15270 562 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 CLEC4GQ6UXB4 293 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 CRB1P82279 1406 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 ANKRD62A6NC57 917 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 TEX35Q5T0J7 233 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 BRAPQ7Z569 592 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 CLRN2A0PK11 232 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 ADRA2BP18089 450 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 FAM47AQ5JRC9 791 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 FAM212AQ96EL1 285 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 TULP4Q9NRJ4 1543 aa13.94□□□□□ -0.18
IRF1-208ENST00000472045 CHMP2AO43633 222 aa13.93□□□□□ -0.18
IRF1-208ENST00000472045 RAD17O75943 681 aa13.93□□□□□ -0.18
IRF1-208ENST00000472045 PDE6AP16499 860 aa13.93□□□□□ -0.18
IRF1-208ENST00000472045 TXNRD1Q16881 649 aa13.93□□□□□ -0.18
IRF1-208ENST00000472045 CERKLQ49MI3 558 aaPredicted RBP13.93□□□□□ -0.18
IRF1-208ENST00000472045 ADCY7P51828 1080 aa13.93□□□□□ -0.18
IRF1-208ENST00000472045 VPS72Q15906 364 aa13.93□□□□□ -0.18
IRF1-208ENST00000472045 HS2ST1Q7LGA3 356 aa13.93□□□□□ -0.18
IRF1-208ENST00000472045 PSMA7O14818 248 aa13.93□□□□□ -0.18
IRF1-208ENST00000472045 GRAPQ13588 217 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms