RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 TFCP2Q12800 502 aa27.94■■■□□ 2.06
C9orf3-213ENST00000471978 CDC42EP5Q6NZY7 148 aa27.94■■■□□ 2.06
C9orf3-213ENST00000471978 WRNIP1Q96S55 665 aa27.94■■■□□ 2.06
C9orf3-213ENST00000471978 AKAP2Q9Y2D5 859 aa27.94■■■□□ 2.06
C9orf3-213ENST00000471978 RPAP1Q9BWH6 1393 aaPredicted RBP27.94■■■□□ 2.06
C9orf3-213ENST00000471978 A0A1B0GUL7 405 aa27.93■■■□□ 2.06
C9orf3-213ENST00000471978 ZBTB22O15209 634 aa27.93■■■□□ 2.06
C9orf3-213ENST00000471978 CRHR2Q13324 411 aa27.93■■■□□ 2.06
C9orf3-213ENST00000471978 DCAF15Q66K64 600 aa27.93■■■□□ 2.06
C9orf3-213ENST00000471978 FBXO46Q6PJ61 603 aaPredicted RBP27.93■■■□□ 2.06
C9orf3-213ENST00000471978 FAM151AQ8WW52 585 aa27.93■■■□□ 2.06
C9orf3-213ENST00000471978 OTUD5Q96G74 571 aa27.93■■■□□ 2.06
C9orf3-213ENST00000471978 TNRC18O15417 2968 aaPredicted RBP27.93■■■□□ 2.06
C9orf3-213ENST00000471978 GTF2A2P52657 109 aa27.92■■■□□ 2.06
C9orf3-213ENST00000471978 DIEXFQ68CQ4 756 aaKnown RBP27.92■■■□□ 2.06
C9orf3-213ENST00000471978 ZGPATQ8N5A5 531 aaKnown RBP27.92■■■□□ 2.06
C9orf3-213ENST00000471978 CCL15-CCL14A0A0B4J2E2 113 aa27.91■■■□□ 2.06
C9orf3-213ENST00000471978 TCP10Q12799 353 aa27.91■■■□□ 2.06
C9orf3-213ENST00000471978 RASGRF1Q13972 1273 aa27.91■■■□□ 2.06
C9orf3-213ENST00000471978 CCL15Q16663 113 aa27.91■■■□□ 2.06
C9orf3-213ENST00000471978 ZKSCAN2Q63HK3 967 aa27.91■■■□□ 2.06
C9orf3-213ENST00000471978 MIGA2Q7L4E1 593 aa27.91■■■□□ 2.06
C9orf3-213ENST00000471978 BRI3BPQ8WY22 251 aa27.91■■■□□ 2.06
C9orf3-213ENST00000471978 ZKSCAN4Q969J2 545 aaPredicted RBP27.91■■■□□ 2.06
C9orf3-213ENST00000471978 XAGE2Q96GT9 111 aa27.91■■■□□ 2.06
C9orf3-213ENST00000471978 USP40Q9NVE5 1235 aa27.91■■■□□ 2.06
C9orf3-213ENST00000471978 SNCAIPQ9Y6H5 919 aa27.91■■■□□ 2.06
C9orf3-213ENST00000471978 SPDYE5A6NIY4 337 aa27.9■■■□□ 2.06
C9orf3-213ENST00000471978 NFIAQ12857 509 aa27.9■■■□□ 2.06
C9orf3-213ENST00000471978 ZNF341Q9BYN7 854 aa27.9■■■□□ 2.06
C9orf3-213ENST00000471978 MVPQ14764 893 aaKnown RBP27.89■■■□□ 2.06
C9orf3-213ENST00000471978 ERO1BQ86YB8 467 aa27.89■■■□□ 2.06
C9orf3-213ENST00000471978 TMEM57Q8N5G2 664 aa27.89■■■□□ 2.06
C9orf3-213ENST00000471978 NEUROD6Q96NK8 337 aa27.89■■■□□ 2.06
C9orf3-213ENST00000471978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.89■■■□□ 2.06
C9orf3-213ENST00000471978 PDS5AQ29RF7 1337 aaKnown RBP27.89■■■□□ 2.05
C9orf3-213ENST00000471978 ABCF2Q9UG63 623 aa27.88■■■□□ 2.05
C9orf3-213ENST00000471978 TRIM17Q9Y577 477 aa27.88■■■□□ 2.05
C9orf3-213ENST00000471978 PNMA6EA0A0J9YXQ4 647 aa27.87■■■□□ 2.05
C9orf3-213ENST00000471978 DZIP1Q86YF9 867 aaKnown RBP27.87■■■□□ 2.05
C9orf3-213ENST00000471978 ERO1AQ96HE7 468 aa27.87■■■□□ 2.05
C9orf3-213ENST00000471978 FAM198AQ9UFP1 575 aa27.87■■■□□ 2.05
C9orf3-213ENST00000471978 HTTP42858 3142 aa27.87■■■□□ 2.05
C9orf3-213ENST00000471978 G3BP1Q13283 466 aaKnown RBP eCLIP27.86■■■□□ 2.05
C9orf3-213ENST00000471978 SPTY2D1Q68D10 685 aaPredicted RBP27.86■■■□□ 2.05
C9orf3-213ENST00000471978 OTOP1Q7RTM1 612 aa27.86■■■□□ 2.05
C9orf3-213ENST00000471978 SP3Q02447 781 aa27.85■■■□□ 2.05
C9orf3-213ENST00000471978 TAF1CQ15572 869 aaPredicted RBP27.85■■■□□ 2.05
C9orf3-213ENST00000471978 FAM43AQ8N2R8 423 aa27.85■■■□□ 2.05
C9orf3-213ENST00000471978 CD99L2Q8TCZ2 262 aa27.85■■■□□ 2.05
C9orf3-213ENST00000471978 IRF6O14896 467 aa27.84■■■□□ 2.05
C9orf3-213ENST00000471978 CETPP11597 493 aa27.84■■■□□ 2.05
C9orf3-213ENST00000471978 INPP5BP32019 993 aa27.84■■■□□ 2.05
C9orf3-213ENST00000471978 PPIL2Q13356 520 aa27.84■■■□□ 2.05
C9orf3-213ENST00000471978 GORABQ5T7V8 394 aa27.84■■■□□ 2.05
C9orf3-213ENST00000471978 SLF2Q8IX21 1173 aa27.84■■■□□ 2.05
C9orf3-213ENST00000471978 ZFYVE28Q9HCC9 887 aa27.84■■■□□ 2.05
C9orf3-213ENST00000471978 GAKO14976 1311 aa27.84■■■□□ 2.05
C9orf3-213ENST00000471978 MYH2Q9UKX2 1941 aa27.83■■■□□ 2.05
C9orf3-213ENST00000471978 SNAPC2Q13487 334 aa27.83■■■□□ 2.05
C9orf3-213ENST00000471978 ZFPM1Q8IX07 1006 aa27.83■■■□□ 2.05
C9orf3-213ENST00000471978 ZNF112Q9UJU3 913 aa27.83■■■□□ 2.05
C9orf3-213ENST00000471978 PPATQ06203 517 aa27.82■■■□□ 2.04
C9orf3-213ENST00000471978 FTSJ3Q8IY81 847 aaKnown RBP27.82■■■□□ 2.04
C9orf3-213ENST00000471978 IDI2Q9BXS1 227 aa27.82■■■□□ 2.04
C9orf3-213ENST00000471978 AK9Q5TCS8 1911 aa27.82■■■□□ 2.04
C9orf3-213ENST00000471978 RGS3P49796 1198 aa27.81■■■□□ 2.04
C9orf3-213ENST00000471978 ERICH6Q7L0X2 663 aa27.81■■■□□ 2.04
C9orf3-213ENST00000471978 FAM163AQ96GL9 167 aaPredicted RBP27.81■■■□□ 2.04
C9orf3-213ENST00000471978 EFCC1Q9HA90 598 aa27.81■■■□□ 2.04
C9orf3-213ENST00000471978 HMG20BQ9P0W2 317 aa27.81■■■□□ 2.04
C9orf3-213ENST00000471978 ENTPD3O75355 529 aa27.8■■■□□ 2.04
C9orf3-213ENST00000471978 WDHD1O75717 1129 aaPredicted RBP27.8■■■□□ 2.04
C9orf3-213ENST00000471978 SPATA5Q8NB90 893 aa27.8■■■□□ 2.04
C9orf3-213ENST00000471978 MROH7-TTC4A0A0A0MT08 1334 aa27.79■■■□□ 2.04
C9orf3-213ENST00000471978 BTBD19C9JJ37 291 aa27.79■■■□□ 2.04
C9orf3-213ENST00000471978 BTDP43251 543 aa27.79■■■□□ 2.04
C9orf3-213ENST00000471978 MECOMQ03112 1051 aa27.79■■■□□ 2.04
C9orf3-213ENST00000471978 POLA2Q14181 598 aa27.79■■■□□ 2.04
C9orf3-213ENST00000471978 PI16Q6UXB8 463 aa27.79■■■□□ 2.04
C9orf3-213ENST00000471978 PTPN22Q9Y2R2 807 aa27.79■■■□□ 2.04
C9orf3-213ENST00000471978 CENPFP49454 3210 aa27.79■■■□□ 2.04
C9orf3-213ENST00000471978 ARID4AP29374 1257 aaPredicted RBP27.78■■■□□ 2.04
C9orf3-213ENST00000471978 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.78■■■□□ 2.04
C9orf3-213ENST00000471978 ZCCHC17Q9NP64 241 aaKnown RBP27.78■■■□□ 2.04
C9orf3-213ENST00000471978 RFX7Q2KHR2 1363 aa27.77■■■□□ 2.04
C9orf3-213ENST00000471978 ATP8B2P98198 1209 aa27.77■■■□□ 2.04
C9orf3-213ENST00000471978 CAP1Q01518 475 aa27.77■■■□□ 2.04
C9orf3-213ENST00000471978 NOL9Q5SY16 702 aaKnown RBP27.77■■■□□ 2.04
C9orf3-213ENST00000471978 TBC1D9Q6ZT07 1266 aa27.77■■■□□ 2.04
C9orf3-213ENST00000471978 ITPRIPQ8IWB1 547 aa27.77■■■□□ 2.04
C9orf3-213ENST00000471978 ZSCAN29Q8IWY8 852 aaPredicted RBP27.77■■■□□ 2.04
C9orf3-213ENST00000471978 SSH3Q8TE77 659 aa27.77■■■□□ 2.04
C9orf3-213ENST00000471978 C1orf115Q9H7X2 142 aa27.77■■■□□ 2.04
C9orf3-213ENST00000471978 OS9Q13438 667 aaPredicted RBP27.76■■■□□ 2.03
C9orf3-213ENST00000471978 ZNF384Q8TF68 577 aa27.76■■■□□ 2.03
C9orf3-213ENST00000471978 ATRNL1Q5VV63 1379 aa27.75■■■□□ 2.03
C9orf3-213ENST00000471978 GPR75-ASB3A0A0A6YYF3 556 aa27.75■■■□□ 2.03
C9orf3-213ENST00000471978 UQCRFS1P1P0C7P4 283 aa27.75■■■□□ 2.03
C9orf3-213ENST00000471978 RLBP1P12271 317 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms