RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 MOGSQ13724 837 aa24.97■■□□□ 1.59
CCDC78-208ENST00000471861 RABL6Q3YEC7 729 aaPredicted RBP24.97■■□□□ 1.59
CCDC78-208ENST00000471861 SLC4A10Q6U841 1118 aa24.97■■□□□ 1.59
CCDC78-208ENST00000471861 MIGA2Q7L4E1 593 aa24.97■■□□□ 1.59
CCDC78-208ENST00000471861 MRIQ9BWK5 157 aa24.97■■□□□ 1.59
CCDC78-208ENST00000471861 BICC1Q9H694 974 aaKnown RBP24.97■■□□□ 1.59
CCDC78-208ENST00000471861 TMOD2Q9NZR1 351 aa24.97■■□□□ 1.59
CCDC78-208ENST00000471861 SALL2Q9Y467 1007 aaPredicted RBP24.97■■□□□ 1.59
CCDC78-208ENST00000471861 BCAMP50895 628 aa24.96■■□□□ 1.59
CCDC78-208ENST00000471861 ANKRD23Q86SG2 305 aa24.96■■□□□ 1.59
CCDC78-208ENST00000471861 ANKRD44Q8N8A2 993 aa24.96■■□□□ 1.59
CCDC78-208ENST00000471861 PRO3102Q9H379 93 aa24.96■■□□□ 1.59
CCDC78-208ENST00000471861 KCNH4Q9UQ05 1017 aa24.96■■□□□ 1.59
CCDC78-208ENST00000471861 PDHXO00330 501 aa24.95■■□□□ 1.58
CCDC78-208ENST00000471861 METTL24Q5JXM2 366 aa24.95■■□□□ 1.58
CCDC78-208ENST00000471861 DCAF15Q66K64 600 aa24.95■■□□□ 1.58
CCDC78-208ENST00000471861 ZNF341Q9BYN7 854 aa24.95■■□□□ 1.58
CCDC78-208ENST00000471861 FRAT2O75474 233 aaPredicted RBP24.94■■□□□ 1.58
CCDC78-208ENST00000471861 PDE8BO95263 885 aa24.94■■□□□ 1.58
CCDC78-208ENST00000471861 GRK4P32298 578 aa24.94■■□□□ 1.58
CCDC78-208ENST00000471861 CAVIN4Q5BKX8 364 aa24.94■■□□□ 1.58
CCDC78-208ENST00000471861 DPF3Q92784 378 aa24.94■■□□□ 1.58
CCDC78-208ENST00000471861 HOOK2Q96ED9 719 aa24.94■■□□□ 1.58
CCDC78-208ENST00000471861 ZNF112Q9UJU3 913 aa24.94■■□□□ 1.58
CCDC78-208ENST00000471861 MYPNQ86TC9 1320 aa24.93■■□□□ 1.58
CCDC78-208ENST00000471861 GJA8P48165 433 aa24.93■■□□□ 1.58
CCDC78-208ENST00000471861 HHIPL2Q6UWX4 724 aa24.93■■□□□ 1.58
CCDC78-208ENST00000471861 KLHDC4Q8TBB5 520 aa24.93■■□□□ 1.58
CCDC78-208ENST00000471861 MAST3O60307 1309 aa24.92■■□□□ 1.58
CCDC78-208ENST00000471861 GJB1P08034 283 aa24.92■■□□□ 1.58
CCDC78-208ENST00000471861 CCL5P13501 91 aa24.92■■□□□ 1.58
CCDC78-208ENST00000471861 RAET1EQ8TD07 263 aa24.92■■□□□ 1.58
CCDC78-208ENST00000471861 SUGT1Q9Y2Z0 365 aa24.92■■□□□ 1.58
CCDC78-208ENST00000471861 FMNL1O95466 1100 aaPredicted RBP24.91■■□□□ 1.58
CCDC78-208ENST00000471861 FGFR2P21802 821 aa24.91■■□□□ 1.58
CCDC78-208ENST00000471861 PRKCZQ05513 592 aa24.91■■□□□ 1.58
CCDC78-208ENST00000471861 NKX2-3Q8TAU0 364 aa24.91■■□□□ 1.58
CCDC78-208ENST00000471861 FAM151AQ8WW52 585 aa24.91■■□□□ 1.58
CCDC78-208ENST00000471861 LAMA3Q16787 3333 aa24.91■■□□□ 1.58
CCDC78-208ENST00000471861 KIF16BQ96L93 1317 aa24.9■■□□□ 1.58
CCDC78-208ENST00000471861 BCRP11274 1271 aa24.9■■□□□ 1.58
CCDC78-208ENST00000471861 NFIAQ12857 509 aa24.9■■□□□ 1.58
CCDC78-208ENST00000471861 DAGLAQ9Y4D2 1042 aa24.9■■□□□ 1.58
CCDC78-208ENST00000471861 NOL9Q5SY16 702 aaKnown RBP24.89■■□□□ 1.58
CCDC78-208ENST00000471861 GPAT2Q6NUI2 795 aa24.89■■□□□ 1.58
CCDC78-208ENST00000471861 CYP2C8P10632 490 aa24.88■■□□□ 1.57
CCDC78-208ENST00000471861 HOXD10P28358 340 aa24.88■■□□□ 1.57
CCDC78-208ENST00000471861 TCP10Q12799 353 aa24.88■■□□□ 1.57
CCDC78-208ENST00000471861 DIXDC1Q155Q3 683 aa24.88■■□□□ 1.57
CCDC78-208ENST00000471861 RNF208Q9H0X6 261 aa24.88■■□□□ 1.57
CCDC78-208ENST00000471861 GABRQQ9UN88 632 aa24.88■■□□□ 1.57
CCDC78-208ENST00000471861 MYH13Q9UKX3 1938 aa24.88■■□□□ 1.57
CCDC78-208ENST00000471861 MGAMO43451 1857 aa24.87■■□□□ 1.57
CCDC78-208ENST00000471861 PUM3Q15397 648 aaKnown RBP24.87■■□□□ 1.57
CCDC78-208ENST00000471861 CDC42EP5Q6NZY7 148 aa24.87■■□□□ 1.57
CCDC78-208ENST00000471861 U2AF1L4Q8WU68 220 aaKnown RBP24.87■■□□□ 1.57
CCDC78-208ENST00000471861 FAM198AQ9UFP1 575 aa24.87■■□□□ 1.57
CCDC78-208ENST00000471861 ATRNL1Q5VV63 1379 aa24.87■■□□□ 1.57
CCDC78-208ENST00000471861 PARK7Q99497 189 aaKnown RBP24.86■■□□□ 1.57
CCDC78-208ENST00000471861 HTATIP2Q9BUP3 242 aa24.86■■□□□ 1.57
CCDC78-208ENST00000471861 UNC93B1Q9H1C4 597 aa24.86■■□□□ 1.57
CCDC78-208ENST00000471861 ZBTB7BO15156 539 aaPredicted RBP24.85■■□□□ 1.57
CCDC78-208ENST00000471861 ZFPM1Q8IX07 1006 aa24.85■■□□□ 1.57
CCDC78-208ENST00000471861 COL6A3P12111 3177 aa24.84■■□□□ 1.57
CCDC78-208ENST00000471861 FARP2O94887 1054 aaPredicted RBP24.84■■□□□ 1.57
CCDC78-208ENST00000471861 IFIT1P09914 478 aaKnown RBP24.84■■□□□ 1.57
CCDC78-208ENST00000471861 PRDX5P30044 214 aa24.84■■□□□ 1.57
CCDC78-208ENST00000471861 FCGRTP55899 365 aa24.84■■□□□ 1.57
CCDC78-208ENST00000471861 UBXN2AP68543 259 aa24.84■■□□□ 1.57
CCDC78-208ENST00000471861 SLAIN1Q8ND83 568 aa24.84■■□□□ 1.57
CCDC78-208ENST00000471861 MRS2Q9HD23 443 aa24.84■■□□□ 1.57
CCDC78-208ENST00000471861 BIN2Q9UBW5 565 aaPredicted RBP24.84■■□□□ 1.57
CCDC78-208ENST00000471861 WDR66Q8TBY9 1149 aa24.83■■□□□ 1.57
CCDC78-208ENST00000471861 DOCK2Q92608 1830 aa24.83■■□□□ 1.57
CCDC78-208ENST00000471861 SOX1O00570 391 aaPredicted RBP24.82■■□□□ 1.56
CCDC78-208ENST00000471861 CXCL11O14625 94 aa24.82■■□□□ 1.56
CCDC78-208ENST00000471861 RFX5P48382 616 aaPredicted RBP24.82■■□□□ 1.56
CCDC78-208ENST00000471861 RFX7Q2KHR2 1363 aa24.81■■□□□ 1.56
CCDC78-208ENST00000471861 A0A0G2JLL6 359 aaPredicted RBP24.81■■□□□ 1.56
CCDC78-208ENST00000471861 PHF20L1A8MW92 1017 aa24.81■■□□□ 1.56
CCDC78-208ENST00000471861 PRRT2Q7Z6L0 340 aaPredicted RBP24.81■■□□□ 1.56
CCDC78-208ENST00000471861 NR2E3Q9Y5X4 410 aa24.81■■□□□ 1.56
CCDC78-208ENST00000471861 AK9Q5TCS8 1911 aa24.8■■□□□ 1.56
CCDC78-208ENST00000471861 SGPL1O95470 568 aa24.8■■□□□ 1.56
CCDC78-208ENST00000471861 ELNP15502 786 aa24.8■■□□□ 1.56
CCDC78-208ENST00000471861 USP44Q9H0E7 712 aa24.8■■□□□ 1.56
CCDC78-208ENST00000471861 PTPRFP10586 1907 aa24.8■■□□□ 1.56
CCDC78-208ENST00000471861 ADCY3O60266 1144 aa24.79■■□□□ 1.56
CCDC78-208ENST00000471861 SLURP2P0DP57 97 aa24.79■■□□□ 1.56
CCDC78-208ENST00000471861 SLC5A1P13866 664 aa24.79■■□□□ 1.56
CCDC78-208ENST00000471861 FLT3LGP49771 235 aa24.79■■□□□ 1.56
CCDC78-208ENST00000471861 ATG9AQ7Z3C6 839 aa24.79■■□□□ 1.56
CCDC78-208ENST00000471861 MRPL50Q8N5N7 158 aaKnown RBP24.79■■□□□ 1.56
CCDC78-208ENST00000471861 LPIN2Q92539 896 aa24.79■■□□□ 1.56
CCDC78-208ENST00000471861 USP40Q9NVE5 1235 aa24.79■■□□□ 1.56
CCDC78-208ENST00000471861 ALPK3Q96L96 1907 aa24.78■■□□□ 1.56
CCDC78-208ENST00000471861 EYA2O00167 538 aa24.78■■□□□ 1.56
CCDC78-208ENST00000471861 INHAP05111 366 aa24.78■■□□□ 1.56
CCDC78-208ENST00000471861 PTPRAP18433 802 aa24.78■■□□□ 1.56
CCDC78-208ENST00000471861 SH3BP5LQ7L8J4 393 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms