RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 CTU1Q7Z7A3 348 aaKnown RBP16.23■□□□□ 0.19
LTA-215ENST00000471842 IFNL1Q8IU54 200 aa16.23■□□□□ 0.19
LTA-215ENST00000471842 MRIQ9BWK5 157 aa16.23■□□□□ 0.19
LTA-215ENST00000471842 SALL1Q9NSC2 1324 aa16.23■□□□□ 0.19
LTA-215ENST00000471842 GPR25O00155 361 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 IGF2BP3O00425 579 aaKnown RBP eCLIP16.22■□□□□ 0.19
LTA-215ENST00000471842 ALDH1A1P00352 501 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 MAP3K9P80192 1104 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.22■□□□□ 0.19
LTA-215ENST00000471842 FAM83AQ86UY5 434 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 HOOK2Q96ED9 719 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 R3HDMLQ9H3Y0 253 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 UNCXA6NJT0 531 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 SURF6O75683 361 aaKnown RBP16.22■□□□□ 0.19
LTA-215ENST00000471842 NFIAQ12857 509 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 DCAF15Q66K64 600 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 SPTY2D1Q68D10 685 aaPredicted RBP16.22■□□□□ 0.19
LTA-215ENST00000471842 PI16Q6UXB8 463 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.22■□□□□ 0.19
LTA-215ENST00000471842 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
LTA-215ENST00000471842 ZKSCAN4Q969J2 545 aaPredicted RBP16.22■□□□□ 0.19
LTA-215ENST00000471842 FKTNO75072 461 aa16.21■□□□□ 0.19
LTA-215ENST00000471842 INHBEP58166 350 aa16.21■□□□□ 0.19
LTA-215ENST00000471842 PICALMQ13492 652 aa16.21■□□□□ 0.19
LTA-215ENST00000471842 TTC39AQ5SRH9 613 aa16.21■□□□□ 0.19
LTA-215ENST00000471842 FKBP1CQ5VVH2 108 aa16.21■□□□□ 0.19
LTA-215ENST00000471842 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
LTA-215ENST00000471842 ERICH6Q7L0X2 663 aa16.21■□□□□ 0.19
LTA-215ENST00000471842 ZSCAN29Q8IWY8 852 aaPredicted RBP16.21■□□□□ 0.19
LTA-215ENST00000471842 RPAP1Q9BWH6 1393 aaPredicted RBP16.2■□□□□ 0.18
LTA-215ENST00000471842 CCL15-CCL14A0A0B4J2E2 113 aa16.2■□□□□ 0.18
LTA-215ENST00000471842 CCL15Q16663 113 aa16.2■□□□□ 0.18
LTA-215ENST00000471842 SLF2Q8IX21 1173 aa16.2■□□□□ 0.18
LTA-215ENST00000471842 SPATA5Q8NB90 893 aa16.2■□□□□ 0.18
LTA-215ENST00000471842 FAM151AQ8WW52 585 aa16.2■□□□□ 0.18
LTA-215ENST00000471842 ZNF341Q9BYN7 854 aa16.2■□□□□ 0.18
LTA-215ENST00000471842 BCL11AQ9H165 835 aa16.2■□□□□ 0.18
LTA-215ENST00000471842 RAI14Q9P0K7 980 aa16.2■□□□□ 0.18
LTA-215ENST00000471842 HMG20BQ9P0W2 317 aa16.2■□□□□ 0.18
LTA-215ENST00000471842 BTDP43251 543 aa16.19■□□□□ 0.18
LTA-215ENST00000471842 ATP8B2P98198 1209 aa16.19■□□□□ 0.18
LTA-215ENST00000471842 POLA2Q14181 598 aa16.19■□□□□ 0.18
LTA-215ENST00000471842 TBC1D9Q6ZT07 1266 aa16.19■□□□□ 0.18
LTA-215ENST00000471842 SNRKQ9NRH2 765 aa16.19■□□□□ 0.18
LTA-215ENST00000471842 RGS3P49796 1198 aa16.18■□□□□ 0.18
LTA-215ENST00000471842 GTF2A2P52657 109 aa16.18■□□□□ 0.18
LTA-215ENST00000471842 MECOMQ03112 1051 aa16.18■□□□□ 0.18
LTA-215ENST00000471842 CRHR2Q13324 411 aa16.18■□□□□ 0.18
LTA-215ENST00000471842 TNNI3KQ59H18 835 aa16.18■□□□□ 0.18
LTA-215ENST00000471842 FAM198AQ9UFP1 575 aa16.18■□□□□ 0.18
LTA-215ENST00000471842 SNCAIPQ9Y6H5 919 aa16.18■□□□□ 0.18
LTA-215ENST00000471842 FPGT-TNNI3KV9GXZ4 949 aa16.18■□□□□ 0.18
LTA-215ENST00000471842 MROH7-TTC4A0A0A0MT08 1334 aa16.18■□□□□ 0.18
LTA-215ENST00000471842 PDS5AQ29RF7 1337 aaKnown RBP16.18■□□□□ 0.18
LTA-215ENST00000471842 SPDYE5A6NIY4 337 aa16.17■□□□□ 0.18
LTA-215ENST00000471842 ZBTB7BO15156 539 aaPredicted RBP16.17■□□□□ 0.18
LTA-215ENST00000471842 UQCRFS1P1P0C7P4 283 aa16.17■□□□□ 0.18
LTA-215ENST00000471842 INPP5BP32019 993 aa16.17■□□□□ 0.18
LTA-215ENST00000471842 SOX10P56693 466 aa16.17■□□□□ 0.18
LTA-215ENST00000471842 ZFPM1Q8IX07 1006 aa16.17■□□□□ 0.18
LTA-215ENST00000471842 SSH3Q8TE77 659 aa16.17■□□□□ 0.18
LTA-215ENST00000471842 PTPN18Q99952 460 aa16.17■□□□□ 0.18
LTA-215ENST00000471842 DBNDD2Q9BQY9 259 aa16.17■□□□□ 0.18
LTA-215ENST00000471842 LRP2BPQ9P2M1 347 aa16.17■□□□□ 0.18
LTA-215ENST00000471842 MCAMP43121 646 aa16.16■□□□□ 0.18
LTA-215ENST00000471842 TAF1CQ15572 869 aaPredicted RBP16.16■□□□□ 0.18
LTA-215ENST00000471842 CCDC158Q5M9N0 1113 aa16.16■□□□□ 0.18
LTA-215ENST00000471842 ERO1BQ86YB8 467 aa16.16■□□□□ 0.18
LTA-215ENST00000471842 BRI3BPQ8WY22 251 aa16.16■□□□□ 0.18
LTA-215ENST00000471842 GAKO14976 1311 aa16.16■□□□□ 0.18
LTA-215ENST00000471842 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
LTA-215ENST00000471842 GSTO1P78417 241 aa16.16■□□□□ 0.18
LTA-215ENST00000471842 HPS5Q9UPZ3 1129 aa16.16■□□□□ 0.18
LTA-215ENST00000471842 APBB1O00213 710 aa16.15■□□□□ 0.18
LTA-215ENST00000471842 CETPP11597 493 aa16.15■□□□□ 0.18
LTA-215ENST00000471842 SNAPC2Q13487 334 aa16.15■□□□□ 0.18
LTA-215ENST00000471842 CEP85Q6P2H3 762 aa16.15■□□□□ 0.18
LTA-215ENST00000471842 CD99L2Q8TCZ2 262 aa16.15■□□□□ 0.18
LTA-215ENST00000471842 MS4A4AQ96JQ5 239 aa16.15■□□□□ 0.18
LTA-215ENST00000471842 NOL10Q9BSC4 688 aaKnown RBP16.15■□□□□ 0.18
LTA-215ENST00000471842 CFHR5Q9BXR6 569 aa16.15■□□□□ 0.18
LTA-215ENST00000471842 CCDC8Q9H0W5 538 aaPredicted RBP16.15■□□□□ 0.18
LTA-215ENST00000471842 TLR7Q9NYK1 1049 aaKnown RBP16.15■□□□□ 0.18
LTA-215ENST00000471842 EXOC6BQ9Y2D4 811 aa16.15■□□□□ 0.18
LTA-215ENST00000471842 TRIM17Q9Y577 477 aa16.15■□□□□ 0.18
LTA-215ENST00000471842 MYH2Q9UKX2 1941 aa16.15■□□□□ 0.18
LTA-215ENST00000471842 IRF6O14896 467 aa16.14■□□□□ 0.17
LTA-215ENST00000471842 WDHD1O75717 1129 aaPredicted RBP16.14■□□□□ 0.17
LTA-215ENST00000471842 ECM2O94769 699 aaPredicted RBP16.14■□□□□ 0.17
LTA-215ENST00000471842 MS4A1P11836 297 aa16.14■□□□□ 0.17
LTA-215ENST00000471842 MLLT1Q03111 559 aaPredicted RBP16.14■□□□□ 0.17
LTA-215ENST00000471842 PPIL2Q13356 520 aa16.14■□□□□ 0.17
LTA-215ENST00000471842 PKN2Q16513 984 aaKnown RBP16.14■□□□□ 0.17
LTA-215ENST00000471842 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
LTA-215ENST00000471842 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
LTA-215ENST00000471842 DDX4Q9NQI0 724 aaKnown RBP16.14■□□□□ 0.17
LTA-215ENST00000471842 COG6Q9Y2V7 657 aa16.14■□□□□ 0.17
LTA-215ENST00000471842 DOCK2Q92608 1830 aa16.14■□□□□ 0.17
LTA-215ENST00000471842 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
LTA-215ENST00000471842 TESPA1A2RU30 521 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms