RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TBC1D9Q6ZT07 1266 aa10.08□□□□□ -0.8
USP48-207ENST00000471752 SH3BP5LQ7L8J4 393 aa10.08□□□□□ -0.8
USP48-207ENST00000471752 REM2Q8IYK8 340 aaPredicted RBP10.08□□□□□ -0.8
USP48-207ENST00000471752 ANKRD13AQ8IZ07 590 aa10.08□□□□□ -0.8
USP48-207ENST00000471752 TMEM57Q8N5G2 664 aa10.08□□□□□ -0.8
USP48-207ENST00000471752 CD99L2Q8TCZ2 262 aa10.08□□□□□ -0.8
USP48-207ENST00000471752 MRIQ9BWK5 157 aa10.08□□□□□ -0.8
USP48-207ENST00000471752 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
USP48-207ENST00000471752 MANSC4A6NHS7 340 aaPredicted RBP10.07□□□□□ -0.8
USP48-207ENST00000471752 SRGAP3O43295 1099 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 CIAO1O76071 339 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 ZBTB48P10074 688 aaPredicted RBP10.07□□□□□ -0.8
USP48-207ENST00000471752 IL15P40933 162 aaPredicted RBP10.07□□□□□ -0.8
USP48-207ENST00000471752 RASGRF1Q13972 1273 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 TBC1D22AQ8WUA7 517 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 OTUD5Q96G74 571 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 XAGE2Q96GT9 111 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 CFHR5Q9BXR6 569 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 ARHGAP39Q9C0H5 1083 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 DDX4Q9NQI0 724 aaKnown RBP10.07□□□□□ -0.8
USP48-207ENST00000471752 USP40Q9NVE5 1235 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.07□□□□□ -0.8
USP48-207ENST00000471752 PDE4DIPQ5VU43 2346 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 AKAP11Q9UKA4 1901 aa10.07□□□□□ -0.8
USP48-207ENST00000471752 CCL15-CCL14A0A0B4J2E2 113 aa10.06□□□□□ -0.8
USP48-207ENST00000471752 IRF6O14896 467 aa10.06□□□□□ -0.8
USP48-207ENST00000471752 CT47B1P0C2W7 299 aaPredicted RBP10.06□□□□□ -0.8
USP48-207ENST00000471752 MOGSQ13724 837 aa10.06□□□□□ -0.8
USP48-207ENST00000471752 CCL15Q16663 113 aa10.06□□□□□ -0.8
USP48-207ENST00000471752 OTOP1Q7RTM1 612 aa10.06□□□□□ -0.8
USP48-207ENST00000471752 CCDC84Q86UT8 332 aaPredicted RBP10.06□□□□□ -0.8
USP48-207ENST00000471752 ARHGAP45Q92619 1136 aa10.06□□□□□ -0.8
USP48-207ENST00000471752 KIF16BQ96L93 1317 aa10.06□□□□□ -0.8
USP48-207ENST00000471752 A0A1B0GUL7 405 aa10.05□□□□□ -0.8
USP48-207ENST00000471752 BTBD19C9JJ37 291 aa10.05□□□□□ -0.8
USP48-207ENST00000471752 CTGFP29279 349 aa10.05□□□□□ -0.8
USP48-207ENST00000471752 TNFAIP1Q13829 316 aa10.05□□□□□ -0.8
USP48-207ENST00000471752 ATF7IPQ6VMQ6 1270 aa10.05□□□□□ -0.8
USP48-207ENST00000471752 WDR66Q8TBY9 1149 aa10.05□□□□□ -0.8
USP48-207ENST00000471752 NEUROD6Q96NK8 337 aa10.05□□□□□ -0.8
USP48-207ENST00000471752 WRNIP1Q96S55 665 aa10.05□□□□□ -0.8
USP48-207ENST00000471752 HMG20BQ9P0W2 317 aa10.05□□□□□ -0.8
USP48-207ENST00000471752 TRIM17Q9Y577 477 aa10.05□□□□□ -0.8
USP48-207ENST00000471752 POTEFA5A3E0 1075 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 DDTLA6NHG4 134 aaPredicted RBP10.04□□□□□ -0.8
USP48-207ENST00000471752 SPDYE5A6NIY4 337 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 LDHBP07195 334 aaKnown RBP10.04□□□□□ -0.8
USP48-207ENST00000471752 TNNI2P48788 182 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 RGS3P49796 1198 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 INHBEP58166 350 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 HNRNPUQ00839 825 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP48-207ENST00000471752 MTX1Q13505 466 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 RRP1BQ14684 758 aaKnown RBP10.04□□□□□ -0.8
USP48-207ENST00000471752 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
USP48-207ENST00000471752 FKBP1CQ5VVH2 108 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 FBXO46Q6PJ61 603 aaPredicted RBP10.04□□□□□ -0.8
USP48-207ENST00000471752 FAM83AQ86UY5 434 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 FAM151AQ8WW52 585 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 ABCF2Q9UG63 623 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 ZNF112Q9UJU3 913 aa10.04□□□□□ -0.8
USP48-207ENST00000471752 UNCXA6NJT0 531 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 FAM196BA6NMK8 535 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 PHF20L1A8MW92 1017 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 WDHD1O75717 1129 aaPredicted RBP10.03□□□□□ -0.8
USP48-207ENST00000471752 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
USP48-207ENST00000471752 GNAI3P08754 354 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 MECOMQ03112 1051 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 DIEXFQ68CQ4 756 aaKnown RBP10.03□□□□□ -0.8
USP48-207ENST00000471752 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.03□□□□□ -0.8
USP48-207ENST00000471752 FBXO3Q9UK99 471 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 DENND2AQ9ULE3 1009 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 PTPN22Q9Y2R2 807 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 SUGT1Q9Y2Z0 365 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 NDUFB9Q9Y6M9 179 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 OTOFQ9HC10 1997 aa10.03□□□□□ -0.8
USP48-207ENST00000471752 ATRNL1Q5VV63 1379 aa10.02□□□□□ -0.8
USP48-207ENST00000471752 KIAA0100Q14667 2235 aaKnown RBP10.02□□□□□ -0.81
USP48-207ENST00000471752 ALDH1A1P00352 501 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 GNAI2P04899 355 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 MCAMP43121 646 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 GTF2A2P52657 109 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 RHBDL3P58872 404 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 SP3Q02447 781 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 TAF1CQ15572 869 aaPredicted RBP10.02□□□□□ -0.81
USP48-207ENST00000471752 GPAT2Q6NUI2 795 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 ERO1BQ86YB8 467 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 PANK1Q8TE04 598 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 GNL3LQ9NVN8 582 aaKnown RBP10.02□□□□□ -0.81
USP48-207ENST00000471752 TLR7Q9NYK1 1049 aaKnown RBP10.02□□□□□ -0.81
USP48-207ENST00000471752 CSADQ9Y600 493 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 GAKO14976 1311 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 SALL1Q9NSC2 1324 aa10.02□□□□□ -0.81
USP48-207ENST00000471752 ECM29Q5VYK3 1845 aa10.01□□□□□ -0.81
USP48-207ENST00000471752 ZBTB7BO15156 539 aaPredicted RBP10.01□□□□□ -0.81
USP48-207ENST00000471752 EN2P19622 333 aaPredicted RBP10.01□□□□□ -0.81
USP48-207ENST00000471752 BTDP43251 543 aa10.01□□□□□ -0.81
USP48-207ENST00000471752 JAG1P78504 1218 aa10.01□□□□□ -0.81
USP48-207ENST00000471752 ATP8B2P98198 1209 aa10.01□□□□□ -0.81
USP48-207ENST00000471752 PICALMQ13492 652 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms