RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 DNAJC25Q9H1X3 360 aa7.48□□□□□ -1.21
RBM39-228ENST00000471635 ZNF576Q9H609 170 aa7.48□□□□□ -1.21
RBM39-228ENST00000471635 EIF4EBP3O60516 100 aaPredicted RBP7.47□□□□□ -1.21
RBM39-228ENST00000471635 CYP11A1P05108 521 aa7.47□□□□□ -1.21
RBM39-228ENST00000471635 ITPKAP23677 461 aa7.47□□□□□ -1.21
RBM39-228ENST00000471635 USP11P51784 963 aa7.47□□□□□ -1.21
RBM39-228ENST00000471635 CDPF1Q6NVV7 123 aa7.47□□□□□ -1.21
RBM39-228ENST00000471635 FBLIM1Q8WUP2 373 aa7.47□□□□□ -1.21
RBM39-228ENST00000471635 TRIM56Q9BRZ2 755 aaKnown RBP7.47□□□□□ -1.21
RBM39-228ENST00000471635 RBCK1Q9BYM8 510 aa7.47□□□□□ -1.21
RBM39-228ENST00000471635 ABCB6Q9NP58 842 aa7.47□□□□□ -1.21
RBM39-228ENST00000471635 NCANO14594 1321 aa7.47□□□□□ -1.21
RBM39-228ENST00000471635 ECEL1O95672 775 aa7.46□□□□□ -1.22
RBM39-228ENST00000471635 B3GALT4O96024 378 aa7.46□□□□□ -1.22
RBM39-228ENST00000471635 ADH5P11766 374 aa7.46□□□□□ -1.22
RBM39-228ENST00000471635 SOX4Q06945 474 aaPredicted RBP7.46□□□□□ -1.22
RBM39-228ENST00000471635 NFKBIBQ15653 356 aa7.46□□□□□ -1.22
RBM39-228ENST00000471635 C2CD4AQ8NCU7 369 aaPredicted RBP7.46□□□□□ -1.22
RBM39-228ENST00000471635 CORO1BQ9BR76 489 aa7.46□□□□□ -1.22
RBM39-228ENST00000471635 CARMIL2Q6F5E8 1435 aa7.45□□□□□ -1.22
RBM39-228ENST00000471635 FAM95CA0A1B0GW59 222 aa7.45□□□□□ -1.22
RBM39-228ENST00000471635 BRD1O95696 1058 aa7.45□□□□□ -1.22
RBM39-228ENST00000471635 ZNF865P0CJ78 1059 aaPredicted RBP7.45□□□□□ -1.22
RBM39-228ENST00000471635 AKAP4Q5JQC9 854 aa7.45□□□□□ -1.22
RBM39-228ENST00000471635 DDX54Q8TDD1 881 aaKnown RBP7.45□□□□□ -1.22
RBM39-228ENST00000471635 EPS8L3Q8TE67 593 aaKnown RBP7.45□□□□□ -1.22
RBM39-228ENST00000471635 ALKBH8Q96BT7 664 aaKnown RBP7.45□□□□□ -1.22
RBM39-228ENST00000471635 SLC38A3Q99624 504 aa7.45□□□□□ -1.22
RBM39-228ENST00000471635 TMEM238LA0A1B0GVL6 79 aa7.44□□□□□ -1.22
RBM39-228ENST00000471635 PRRG2O14669 202 aa7.44□□□□□ -1.22
RBM39-228ENST00000471635 ZNF157P51786 506 aaPredicted RBP7.44□□□□□ -1.22
RBM39-228ENST00000471635 GRM2Q14416 872 aa7.44□□□□□ -1.22
RBM39-228ENST00000471635 HP1BP3Q5SSJ5 553 aaPredicted RBP7.44□□□□□ -1.22
RBM39-228ENST00000471635 KRTAP5-3Q6L8H2 238 aa7.44□□□□□ -1.22
RBM39-228ENST00000471635 PRPF40BQ6NWY9 871 aaKnown RBP7.44□□□□□ -1.22
RBM39-228ENST00000471635 PAOXQ6QHF9 649 aa7.44□□□□□ -1.22
RBM39-228ENST00000471635 TMC7Q7Z402 723 aa7.44□□□□□ -1.22
RBM39-228ENST00000471635 RAD18Q9NS91 495 aa7.44□□□□□ -1.22
RBM39-228ENST00000471635 DCTN4Q9UJW0 460 aa7.44□□□□□ -1.22
RBM39-228ENST00000471635 GNEQ9Y223 722 aaKnown RBP7.44□□□□□ -1.22
RBM39-228ENST00000471635 ACTL7BQ9Y614 415 aa7.44□□□□□ -1.22
RBM39-228ENST00000471635 MAPK1P28482 360 aa7.43□□□□□ -1.22
RBM39-228ENST00000471635 PTPN12Q05209 780 aaKnown RBP7.43□□□□□ -1.22
RBM39-228ENST00000471635 PDE3AQ14432 1141 aa7.43□□□□□ -1.22
RBM39-228ENST00000471635 LILRA6Q6PI73 481 aa7.43□□□□□ -1.22
RBM39-228ENST00000471635 PI16Q6UXB8 463 aa7.43□□□□□ -1.22
RBM39-228ENST00000471635 DYMQ7RTS9 669 aa7.43□□□□□ -1.22
RBM39-228ENST00000471635 BHLHE22Q8NFJ8 381 aaPredicted RBP7.43□□□□□ -1.22
RBM39-228ENST00000471635 YIPF2Q9BWQ6 316 aa7.43□□□□□ -1.22
RBM39-228ENST00000471635 ZFYVE1Q9HBF4 777 aa7.43□□□□□ -1.22
RBM39-228ENST00000471635 AP4E1Q9UPM8 1137 aa7.43□□□□□ -1.22
RBM39-228ENST00000471635 TRAK1Q9UPV9 953 aa7.43□□□□□ -1.22
RBM39-228ENST00000471635 RAB6AP20340 208 aa7.42□□□□□ -1.22
RBM39-228ENST00000471635 SHISA5Q8N114 240 aa7.42□□□□□ -1.22
RBM39-228ENST00000471635 GLIS3Q8NEA6 775 aa7.42□□□□□ -1.22
RBM39-228ENST00000471635 NLRP2Q9NX02 1062 aa7.42□□□□□ -1.22
RBM39-228ENST00000471635 FCGRTP55899 365 aa7.41□□□□□ -1.22
RBM39-228ENST00000471635 FAAP100Q0VG06 881 aa7.41□□□□□ -1.22
RBM39-228ENST00000471635 PLCL1Q15111 1095 aa7.41□□□□□ -1.22
RBM39-228ENST00000471635 ZNF792Q3KQV3 632 aa7.41□□□□□ -1.22
RBM39-228ENST00000471635 DTHD1Q6ZMT9 781 aa7.41□□□□□ -1.22
RBM39-228ENST00000471635 ZAR1Q86SH2 424 aa7.41□□□□□ -1.22
RBM39-228ENST00000471635 ATG4DQ86TL0 474 aaPredicted RBP7.41□□□□□ -1.22
RBM39-228ENST00000471635 ZC3H12CQ9C0D7 883 aaKnown RBP7.41□□□□□ -1.22
RBM39-228ENST00000471635 AP3B2Q13367 1082 aa7.4□□□□□ -1.22
RBM39-228ENST00000471635 RPS26P11Q5JNZ5 115 aaPredicted RBP7.4□□□□□ -1.22
RBM39-228ENST00000471635 TMEM40Q8WWA1 233 aa7.4□□□□□ -1.22
RBM39-228ENST00000471635 EZH1Q92800 747 aaPredicted RBP7.4□□□□□ -1.22
RBM39-228ENST00000471635 TBC1D32Q96NH3 1257 aa7.4□□□□□ -1.22
RBM39-228ENST00000471635 GPN3Q9UHW5 284 aaPredicted RBP7.4□□□□□ -1.22
RBM39-228ENST00000471635 PNMA6FA0A0J9YX94 578 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 B8ZZF3 427 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 AOC2O75106 756 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 NFICP08651 508 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 LIG1P18858 919 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 ADMP35318 185 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 FAM168AQ92567 244 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 WDR18Q9BV38 432 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 KRTAP9-3Q9BYQ3 159 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 BCO2Q9BYV7 579 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 FAM105AQ9NUU6 356 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 PRKAG2Q9UGJ0 569 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 SLC5A6Q9Y289 635 aa7.39□□□□□ -1.23
RBM39-228ENST00000471635 ASPAP45381 313 aa7.38□□□□□ -1.23
RBM39-228ENST00000471635 PLCB3Q01970 1234 aa7.38□□□□□ -1.23
RBM39-228ENST00000471635 MAP7Q14244 749 aa7.38□□□□□ -1.23
RBM39-228ENST00000471635 DSC3Q14574 896 aa7.38□□□□□ -1.23
RBM39-228ENST00000471635 STK11IPQ8N1F8 1099 aa7.38□□□□□ -1.23
RBM39-228ENST00000471635 TOX2Q96NM4 488 aa7.38□□□□□ -1.23
RBM39-228ENST00000471635 SEMA6CQ9H3T2 930 aa7.38□□□□□ -1.23
RBM39-228ENST00000471635 PPP4R2Q9NY27 417 aa7.38□□□□□ -1.23
RBM39-228ENST00000471635 IVNS1ABPQ9Y6Y0 642 aa7.38□□□□□ -1.23
RBM39-228ENST00000471635 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.37□□□□□ -1.23
RBM39-228ENST00000471635 FAM170BA6NMN3 283 aa7.37□□□□□ -1.23
RBM39-228ENST00000471635 TREHO43280 583 aa7.37□□□□□ -1.23
RBM39-228ENST00000471635 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.37□□□□□ -1.23
RBM39-228ENST00000471635 DUSP27Q5VZP5 1158 aa7.37□□□□□ -1.23
RBM39-228ENST00000471635 WDR89Q96FK6 387 aaPredicted RBP7.37□□□□□ -1.23
RBM39-228ENST00000471635 CCDC86Q9H6F5 360 aaKnown RBP7.37□□□□□ -1.23
RBM39-228ENST00000471635 ACSS3Q9H6R3 686 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms