RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 SMAD5Q99717 465 aaKnown RBP7.97□□□□□ -1.13
NF1-208ENST00000471572 GPC6Q9Y625 555 aaPredicted RBP7.97□□□□□ -1.13
NF1-208ENST00000471572 FAM83GA6ND36 823 aa7.96□□□□□ -1.13
NF1-208ENST00000471572 SPRED3Q2MJR0 410 aa7.96□□□□□ -1.13
NF1-208ENST00000471572 GNASQ5JWF2 1037 aa7.96□□□□□ -1.13
NF1-208ENST00000471572 C10orf62Q5T681 223 aaPredicted RBP7.96□□□□□ -1.13
NF1-208ENST00000471572 TTC39BQ5VTQ0 682 aaPredicted RBP7.96□□□□□ -1.13
NF1-208ENST00000471572 BICDL1Q6ZP65 573 aa7.96□□□□□ -1.13
NF1-208ENST00000471572 CHPFQ8IZ52 775 aa7.96□□□□□ -1.13
NF1-208ENST00000471572 CLUHP3Q96NS8 147 aa7.96□□□□□ -1.13
NF1-208ENST00000471572 SPATA9Q9BWV2 254 aa7.96□□□□□ -1.13
NF1-208ENST00000471572 AVENQ9NQS1 362 aaPredicted RBP7.96□□□□□ -1.13
NF1-208ENST00000471572 POTEMA6NI47 508 aa7.96□□□□□ -1.14
NF1-208ENST00000471572 RAPGEF3O95398 923 aa7.96□□□□□ -1.14
NF1-208ENST00000471572 ITPKAP23677 461 aa7.96□□□□□ -1.14
NF1-208ENST00000471572 BRD3Q15059 726 aa7.96□□□□□ -1.14
NF1-208ENST00000471572 POTEGQ6S5H5 508 aa7.96□□□□□ -1.14
NF1-208ENST00000471572 C19orf47Q8N9M1 422 aaKnown RBP7.96□□□□□ -1.14
NF1-208ENST00000471572 ZBTB38Q8NAP3 1195 aaPredicted RBP7.96□□□□□ -1.14
NF1-208ENST00000471572 ITPKCQ96DU7 683 aa7.96□□□□□ -1.14
NF1-208ENST00000471572 CDH19Q9H159 772 aa7.96□□□□□ -1.14
NF1-208ENST00000471572 MIR1-1HGQ9H1L0 117 aa7.96□□□□□ -1.14
NF1-208ENST00000471572 RB1CC1Q8TDY2 1594 aa7.96□□□□□ -1.14
NF1-208ENST00000471572 RFPL3O75679 317 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 IMPDH2P12268 514 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 L1CAMP32004 1257 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 EXOC2Q96KP1 924 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 HHIPQ96QV1 700 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 ZIC5Q96T25 663 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 CCDC8Q9H0W5 538 aaPredicted RBP7.95□□□□□ -1.14
NF1-208ENST00000471572 NCOA5Q9HCD5 579 aaKnown RBP7.95□□□□□ -1.14
NF1-208ENST00000471572 DCAF1Q9Y4B6 1507 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 TATP17735 454 aaPredicted RBP7.95□□□□□ -1.14
NF1-208ENST00000471572 SLC10A6Q3KNW5 377 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 PODNQ7Z5L7 613 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 NLRP8Q86W28 1048 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 EHMT1Q9H9B1 1298 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 MAPRE3Q9UPY8 281 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 POLR3KQ9Y2Y1 108 aaPredicted RBP7.95□□□□□ -1.14
NF1-208ENST00000471572 PCDHB14Q9Y5E9 798 aa7.95□□□□□ -1.14
NF1-208ENST00000471572 MAFGO15525 162 aa7.94□□□□□ -1.14
NF1-208ENST00000471572 GTF2E1P29083 439 aaPredicted RBP7.94□□□□□ -1.14
NF1-208ENST00000471572 CDC27P30260 824 aa7.94□□□□□ -1.14
NF1-208ENST00000471572 PIN1Q13526 163 aaPredicted RBP7.94□□□□□ -1.14
NF1-208ENST00000471572 SLC27A3Q5K4L6 730 aa7.94□□□□□ -1.14
NF1-208ENST00000471572 COL13A1Q5TAT6 717 aaPredicted RBP7.94□□□□□ -1.14
NF1-208ENST00000471572 SVIPQ8NHG7 77 aa7.94□□□□□ -1.14
NF1-208ENST00000471572 SCYL1Q96KG9 808 aa7.94□□□□□ -1.14
NF1-208ENST00000471572 KHNYNO15037 678 aaKnown RBP7.93□□□□□ -1.14
NF1-208ENST00000471572 MMP20O60882 483 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 EPB42P16452 691 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 NNTQ13423 1086 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 LONRF2Q1L5Z9 754 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 HGSNATQ68CP4 663 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 KSR2Q6VAB6 950 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 EEPD1Q7L9B9 569 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 ANKLE1Q8NAG6 615 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 OR13H1Q8NG92 308 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 RIN3Q8TB24 985 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 KCTD12Q96CX2 325 aaKnown RBP7.93□□□□□ -1.14
NF1-208ENST00000471572 OSMRQ99650 979 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 KLF16Q9BXK1 252 aaPredicted RBP7.93□□□□□ -1.14
NF1-208ENST00000471572 ZNF700Q9H0M5 742 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 HMGB1P1B2RPK0 211 aaPredicted RBP7.93□□□□□ -1.14
NF1-208ENST00000471572 GRIN3BO60391 1043 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 SASH3O75995 380 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 SDSP20132 328 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 ZYXQ15942 572 aaKnown RBP7.93□□□□□ -1.14
NF1-208ENST00000471572 TMTC2Q8N394 836 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 KISS1RQ969F8 398 aaPredicted RBP7.93□□□□□ -1.14
NF1-208ENST00000471572 GAL3ST3Q96A11 431 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 MTMR8Q96EF0 704 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 SLC26A8Q96RN1 970 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 TRIM8Q9BZR9 551 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 ZFAND3Q9H8U3 227 aa7.93□□□□□ -1.14
NF1-208ENST00000471572 NOB1Q9ULX3 412 aaKnown RBP7.93□□□□□ -1.14
NF1-208ENST00000471572 PHLDB1Q86UU1 1377 aa7.92□□□□□ -1.14
NF1-208ENST00000471572 WWC2Q6AWC2 1192 aa7.92□□□□□ -1.14
NF1-208ENST00000471572 SLC4A10Q6U841 1118 aa7.92□□□□□ -1.14
NF1-208ENST00000471572 LRRTM3Q86VH5 581 aa7.92□□□□□ -1.14
NF1-208ENST00000471572 HOOK2Q96ED9 719 aa7.92□□□□□ -1.14
NF1-208ENST00000471572 MRGPRX2Q96LB1 330 aa7.92□□□□□ -1.14
NF1-208ENST00000471572 CEP63Q96MT8 703 aa7.92□□□□□ -1.14
NF1-208ENST00000471572 INTUQ9ULD6 942 aa7.92□□□□□ -1.14
NF1-208ENST00000471572 ZCCHC6Q5VYS8 1495 aaKnown RBP7.92□□□□□ -1.14
NF1-208ENST00000471572 FGAP02671 866 aa7.91□□□□□ -1.14
NF1-208ENST00000471572 BMP6P22004 513 aa7.91□□□□□ -1.14
NF1-208ENST00000471572 TARSP26639 723 aaKnown RBP7.91□□□□□ -1.14
NF1-208ENST00000471572 CCNFP41002 786 aa7.91□□□□□ -1.14
NF1-208ENST00000471572 RPIAP49247 311 aa7.91□□□□□ -1.14
NF1-208ENST00000471572 ZNF157P51786 506 aaPredicted RBP7.91□□□□□ -1.14
NF1-208ENST00000471572 KIF2CQ99661 725 aa7.91□□□□□ -1.14
NF1-208ENST00000471572 PCGF6Q9BYE7 350 aa7.91□□□□□ -1.14
NF1-208ENST00000471572 ZCCHC2Q9C0B9 1178 aaKnown RBP7.91□□□□□ -1.14
NF1-208ENST00000471572 ZNF576Q9H609 170 aa7.91□□□□□ -1.14
NF1-208ENST00000471572 RPS6KL1Q9Y6S9 549 aa7.91□□□□□ -1.14
NF1-208ENST00000471572 FOSP01100 380 aaPredicted RBP7.91□□□□□ -1.14
NF1-208ENST00000471572 GUCY2CP25092 1073 aa7.91□□□□□ -1.14
NF1-208ENST00000471572 ARSJQ5FYB0 599 aaPredicted RBP7.91□□□□□ -1.14
NF1-208ENST00000471572 CNNM4Q6P4Q7 775 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms