RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 PI16Q6UXB8 463 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 SH3BP5LQ7L8J4 393 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 FAM83AQ86UY5 434 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 TMEM57Q8N5G2 664 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 WDR66Q8TBY9 1149 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 SUGT1Q9Y2Z0 365 aa12.18□□□□□ -0.46
RPRD1B-204ENST00000471511 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
RPRD1B-204ENST00000471511 RLBP1P12271 317 aa12.17□□□□□ -0.46
RPRD1B-204ENST00000471511 FKBP1CQ5VVH2 108 aa12.17□□□□□ -0.46
RPRD1B-204ENST00000471511 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
RPRD1B-204ENST00000471511 OTOP1Q7RTM1 612 aa12.17□□□□□ -0.46
RPRD1B-204ENST00000471511 CD99L2Q8TCZ2 262 aa12.17□□□□□ -0.46
RPRD1B-204ENST00000471511 FRAT1Q92837 279 aaPredicted RBP12.17□□□□□ -0.46
RPRD1B-204ENST00000471511 OTUD5Q96G74 571 aa12.17□□□□□ -0.46
RPRD1B-204ENST00000471511 XAGE2Q96GT9 111 aa12.17□□□□□ -0.46
RPRD1B-204ENST00000471511 LAMB1P07942 1786 aa12.17□□□□□ -0.46
RPRD1B-204ENST00000471511 SALL1Q9NSC2 1324 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 A0A1B0GUL7 405 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 SPDYE5A6NIY4 337 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 IRF6O14896 467 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 ALDH1A1P00352 501 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 TNNI2P48788 182 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 MOGSQ13724 837 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 FBXO46Q6PJ61 603 aaPredicted RBP12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 FAM151AQ8WW52 585 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 WRNIP1Q96S55 665 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 DDX4Q9NQI0 724 aaKnown RBP12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 USP40Q9NVE5 1235 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 ZNF112Q9UJU3 913 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 ATRNL1Q5VV63 1379 aa12.16□□□□□ -0.46
RPRD1B-204ENST00000471511 CCL15-CCL14A0A0B4J2E2 113 aa12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 ZBTB22O15209 634 aa12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 LDHBP07195 334 aaKnown RBP12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 GNAI3P08754 354 aa12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 CCL15Q16663 113 aa12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 TBC1D9Q6ZT07 1266 aa12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 ARHGAP39Q9C0H5 1083 aa12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 C1orf115Q9H7X2 142 aa12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 DENND2AQ9ULE3 1009 aa12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 TRIM17Q9Y577 477 aa12.15□□□□□ -0.46
RPRD1B-204ENST00000471511 GAKO14976 1311 aa12.14□□□□□ -0.47
RPRD1B-204ENST00000471511 PHF20L1A8MW92 1017 aa12.14□□□□□ -0.47
RPRD1B-204ENST00000471511 BTBD19C9JJ37 291 aa12.14□□□□□ -0.47
RPRD1B-204ENST00000471511 WDHD1O75717 1129 aaPredicted RBP12.14□□□□□ -0.47
RPRD1B-204ENST00000471511 CTGFP29279 349 aa12.14□□□□□ -0.47
RPRD1B-204ENST00000471511 PKN2Q16513 984 aaKnown RBP12.14□□□□□ -0.47
RPRD1B-204ENST00000471511 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.14□□□□□ -0.47
RPRD1B-204ENST00000471511 RFX7Q2KHR2 1363 aa12.14□□□□□ -0.47
RPRD1B-204ENST00000471511 MAST3O60307 1309 aa12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 POTEFA5A3E0 1075 aa12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 DDTLA6NHG4 134 aaPredicted RBP12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 GNAI2P04899 355 aa12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 RGS3P49796 1198 aa12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 GTF2A2P52657 109 aa12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 RHBDL3P58872 404 aa12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 HNRNPUQ00839 825 aaKnown RBP eCLIP12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 POLA2Q14181 598 aa12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 ERO1BQ86YB8 467 aa12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 NEUROD6Q96NK8 337 aa12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 PTPN22Q9Y2R2 807 aa12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 RPAP1Q9BWH6 1393 aaPredicted RBP12.13□□□□□ -0.47
RPRD1B-204ENST00000471511 ZSWIM8A7E2V4 1837 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 SEMA3EO15041 775 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 ECM2O94769 699 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 MCAMP43121 646 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 SP3Q02447 781 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 MECOMQ03112 1051 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 PPIL2Q13356 520 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 RRP1BQ14684 758 aaKnown RBP12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 CCDC84Q86UT8 332 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 IDI2Q9BXS1 227 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 GNL3LQ9NVN8 582 aaKnown RBP12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 TMOD2Q9NZR1 351 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 ABCF2Q9UG63 623 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 CSADQ9Y600 493 aa12.12□□□□□ -0.47
RPRD1B-204ENST00000471511 ZBTB7BO15156 539 aaPredicted RBP12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 IPO8O15397 1037 aaKnown RBP12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 ATP8B2P98198 1209 aa12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 TAF1CQ15572 869 aaPredicted RBP12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 ZKSCAN2Q63HK3 967 aa12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 DIEXFQ68CQ4 756 aaKnown RBP12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 GPAT2Q6NUI2 795 aa12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 SNRKQ9NRH2 765 aa12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 KCNH4Q9UQ05 1017 aa12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 MYH13Q9UKX3 1938 aa12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
RPRD1B-204ENST00000471511 CENPFP49454 3210 aa12.1□□□□□ -0.47
RPRD1B-204ENST00000471511 GPR75-ASB3A0A0A6YYF3 556 aa12.1□□□□□ -0.47
RPRD1B-204ENST00000471511 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
RPRD1B-204ENST00000471511 BTDP43251 543 aa12.1□□□□□ -0.47
RPRD1B-204ENST00000471511 PPATQ06203 517 aa12.1□□□□□ -0.47
RPRD1B-204ENST00000471511 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
RPRD1B-204ENST00000471511 SSH3Q8TE77 659 aa12.1□□□□□ -0.47
RPRD1B-204ENST00000471511 NSUN4Q96CB9 384 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms