RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 MS4A1P11836 297 aa28.86■■■□□ 2.21
RNF220-208ENST00000471494 SPTY2D1Q68D10 685 aaPredicted RBP28.86■■■□□ 2.21
RNF220-208ENST00000471494 CDC42EP5Q6NZY7 148 aa28.86■■■□□ 2.21
RNF220-208ENST00000471494 SURF6O75683 361 aaKnown RBP28.85■■■□□ 2.21
RNF220-208ENST00000471494 INHBEP58166 350 aa28.85■■■□□ 2.21
RNF220-208ENST00000471494 DGKZQ13574 1117 aa28.85■■■□□ 2.21
RNF220-208ENST00000471494 MCOLN1Q9GZU1 580 aa28.85■■■□□ 2.21
RNF220-208ENST00000471494 ELP3Q9H9T3 547 aa28.85■■■□□ 2.21
RNF220-208ENST00000471494 TBC1D8O95759 1140 aa28.84■■■□□ 2.21
RNF220-208ENST00000471494 SLF2Q8IX21 1173 aa28.84■■■□□ 2.21
RNF220-208ENST00000471494 CSADQ9Y600 493 aa28.84■■■□□ 2.21
RNF220-208ENST00000471494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.83■■■□□ 2.214e-9■■□□□ 11.7
RNF220-208ENST00000471494 FAM151AQ8WW52 585 aa28.83■■■□□ 2.21
RNF220-208ENST00000471494 GPR108Q9NPR9 543 aa28.83■■■□□ 2.21
RNF220-208ENST00000471494 USP40Q9NVE5 1235 aa28.83■■■□□ 2.21
RNF220-208ENST00000471494 HMG20BQ9P0W2 317 aa28.83■■■□□ 2.21
RNF220-208ENST00000471494 DOCK2Q92608 1830 aa28.83■■■□□ 2.21
RNF220-208ENST00000471494 ALDH1A1P00352 501 aa28.82■■■□□ 2.2
RNF220-208ENST00000471494 ARID4AP29374 1257 aaPredicted RBP28.82■■■□□ 2.2
RNF220-208ENST00000471494 MAP3K9P80192 1104 aa28.82■■■□□ 2.2
RNF220-208ENST00000471494 VGLL4Q14135 290 aa28.82■■■□□ 2.2
RNF220-208ENST00000471494 DCAF15Q66K64 600 aa28.82■■■□□ 2.2
RNF220-208ENST00000471494 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.82■■■□□ 2.2
RNF220-208ENST00000471494 SPATA5Q8NB90 893 aa28.82■■■□□ 2.2
RNF220-208ENST00000471494 OPTNQ96CV9 577 aa28.82■■■□□ 2.2
RNF220-208ENST00000471494 GAKO14976 1311 aa28.81■■■□□ 2.2
RNF220-208ENST00000471494 UQCRFS1P1P0C7P4 283 aa28.81■■■□□ 2.2
RNF220-208ENST00000471494 GJA5P36382 358 aa28.81■■■□□ 2.2
RNF220-208ENST00000471494 TCP10Q12799 353 aa28.81■■■□□ 2.2
RNF220-208ENST00000471494 TNNI3KQ59H18 835 aa28.81■■■□□ 2.2
RNF220-208ENST00000471494 ERICH6Q7L0X2 663 aa28.81■■■□□ 2.2
RNF220-208ENST00000471494 FPGT-TNNI3KV9GXZ4 949 aa28.81■■■□□ 2.2
RNF220-208ENST00000471494 NFIAQ12857 509 aa28.8■■■□□ 2.2
RNF220-208ENST00000471494 CEP85Q6P2H3 762 aa28.8■■■□□ 2.2
RNF220-208ENST00000471494 PI16Q6UXB8 463 aa28.8■■■□□ 2.2
RNF220-208ENST00000471494 IFNL1Q8IU54 200 aa28.8■■■□□ 2.2
RNF220-208ENST00000471494 WRNIP1Q96S55 665 aa28.8■■■□□ 2.2
RNF220-208ENST00000471494 RCAN3Q9UKA8 241 aa28.8■■■□□ 2.2
RNF220-208ENST00000471494 NOP58Q9Y2X3 529 aaKnown RBP28.8■■■□□ 2.2
RNF220-208ENST00000471494 CFHR5Q9BXR6 569 aa28.79■■■□□ 2.2
RNF220-208ENST00000471494 MROH7-TTC4A0A0A0MT08 1334 aa28.78■■■□□ 2.2
RNF220-208ENST00000471494 TTC39AQ5SRH9 613 aa28.78■■■□□ 2.2
RNF220-208ENST00000471494 MAST2Q6P0Q8 1798 aa28.78■■■□□ 2.2
RNF220-208ENST00000471494 MCAMP43121 646 aa28.77■■■□□ 2.2
RNF220-208ENST00000471494 MECOMQ03112 1051 aa28.77■■■□□ 2.2
RNF220-208ENST00000471494 NOM1Q5C9Z4 860 aaKnown RBP28.77■■■□□ 2.2
RNF220-208ENST00000471494 ZNF296Q8WUU4 475 aaPredicted RBP28.77■■■□□ 2.2
RNF220-208ENST00000471494 FAM163AQ96GL9 167 aaPredicted RBP28.77■■■□□ 2.2
RNF220-208ENST00000471494 ZNF341Q9BYN7 854 aa28.77■■■□□ 2.2
RNF220-208ENST00000471494 FAM198AQ9UFP1 575 aa28.77■■■□□ 2.2
RNF220-208ENST00000471494 CCDC85CA6NKD9 419 aa28.76■■■□□ 2.19
RNF220-208ENST00000471494 GPR25O00155 361 aa28.76■■■□□ 2.19
RNF220-208ENST00000471494 IGF2BP3O00425 579 aaKnown RBP eCLIP28.76■■■□□ 2.19
RNF220-208ENST00000471494 BTDP43251 543 aa28.76■■■□□ 2.19
RNF220-208ENST00000471494 CCDC158Q5M9N0 1113 aa28.76■■■□□ 2.19
RNF220-208ENST00000471494 OTUD7BQ6GQQ9 843 aa28.76■■■□□ 2.19
RNF220-208ENST00000471494 CTU1Q7Z7A3 348 aaKnown RBP28.76■■■□□ 2.19
RNF220-208ENST00000471494 CNKSR2Q8WXI2 1034 aa28.76■■■□□ 2.19
RNF220-208ENST00000471494 OTUD5Q96G74 571 aa28.76■■■□□ 2.19
RNF220-208ENST00000471494 DBNDD2Q9BQY9 259 aa28.76■■■□□ 2.19
RNF220-208ENST00000471494 GSTO1P78417 241 aa28.75■■■□□ 2.19
RNF220-208ENST00000471494 TBC1D9Q6ZT07 1266 aa28.75■■■□□ 2.19
RNF220-208ENST00000471494 MIGA2Q7L4E1 593 aa28.75■■■□□ 2.19
RNF220-208ENST00000471494 RAI14Q9P0K7 980 aa28.75■■■□□ 2.19
RNF220-208ENST00000471494 DDX19BQ9UMR2 479 aa28.75■■■□□ 2.19
RNF220-208ENST00000471494 RFX7Q2KHR2 1363 aa28.75■■■□□ 2.19
RNF220-208ENST00000471494 SPDYE5A6NIY4 337 aa28.74■■■□□ 2.19
RNF220-208ENST00000471494 RGS3P49796 1198 aa28.74■■■□□ 2.19
RNF220-208ENST00000471494 ZKSCAN4Q969J2 545 aaPredicted RBP28.74■■■□□ 2.19
RNF220-208ENST00000471494 IDI2Q9BXS1 227 aa28.74■■■□□ 2.19
RNF220-208ENST00000471494 COG6Q9Y2V7 657 aa28.74■■■□□ 2.19
RNF220-208ENST00000471494 SNCAIPQ9Y6H5 919 aa28.74■■■□□ 2.19
RNF220-208ENST00000471494 MYO5AQ9Y4I1 1855 aaKnown RBP28.74■■■□□ 2.19
RNF220-208ENST00000471494 ENTPD3O75355 529 aa28.73■■■□□ 2.19
RNF220-208ENST00000471494 LDHCP07864 332 aa28.73■■■□□ 2.19
RNF220-208ENST00000471494 ERO1BQ86YB8 467 aa28.73■■■□□ 2.19
RNF220-208ENST00000471494 LRP2BPQ9P2M1 347 aa28.73■■■□□ 2.19
RNF220-208ENST00000471494 TESPA1A2RU30 521 aaPredicted RBP28.72■■■□□ 2.19
RNF220-208ENST00000471494 GTF2A2P52657 109 aa28.72■■■□□ 2.19
RNF220-208ENST00000471494 ERC1Q8IUD2 1116 aa28.72■■■□□ 2.19
RNF220-208ENST00000471494 ZNF384Q8TF68 577 aa28.72■■■□□ 2.19
RNF220-208ENST00000471494 NSUN4Q96CB9 384 aaKnown RBP28.72■■■□□ 2.19
RNF220-208ENST00000471494 R3HDMLQ9H3Y0 253 aa28.72■■■□□ 2.19
RNF220-208ENST00000471494 SNRKQ9NRH2 765 aa28.72■■■□□ 2.19
RNF220-208ENST00000471494 GPR75-ASB3A0A0A6YYF3 556 aa28.71■■■□□ 2.19
RNF220-208ENST00000471494 FKTNO75072 461 aa28.71■■■□□ 2.19
RNF220-208ENST00000471494 ZFPM1Q8IX07 1006 aa28.71■■■□□ 2.19
RNF220-208ENST00000471494 MS4A4AQ96JQ5 239 aa28.71■■■□□ 2.19
RNF220-208ENST00000471494 DBNLQ9UJU6 430 aaKnown RBP28.71■■■□□ 2.19
RNF220-208ENST00000471494 EXOC6BQ9Y2D4 811 aa28.71■■■□□ 2.19
RNF220-208ENST00000471494 CCL15-CCL14A0A0B4J2E2 113 aa28.7■■■□□ 2.18
RNF220-208ENST00000471494 INPP5BP32019 993 aa28.7■■■□□ 2.18
RNF220-208ENST00000471494 PICALMQ13492 652 aa28.7■■■□□ 2.18
RNF220-208ENST00000471494 CCL15Q16663 113 aa28.7■■■□□ 2.18
RNF220-208ENST00000471494 ZSCAN29Q8IWY8 852 aaPredicted RBP28.7■■■□□ 2.18
RNF220-208ENST00000471494 CHMP4BQ9H444 224 aaKnown RBP28.7■■■□□ 2.18
RNF220-208ENST00000471494 WDHD1O75717 1129 aaPredicted RBP28.69■■■□□ 2.18
RNF220-208ENST00000471494 HSP90AB4PQ58FF6 505 aa28.69■■■□□ 2.18
RNF220-208ENST00000471494 BRI3BPQ8WY22 251 aa28.69■■■□□ 2.18
RNF220-208ENST00000471494 ZNF512BQ96KM6 892 aaPredicted RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms