RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 NUCB1Q02818 461 aa7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 CHD1LQ86WJ1 897 aa7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 ZNF594Q96JF6 807 aaPredicted RBP7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 ESYT1Q9BSJ8 1104 aa7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 ETNK1Q9HBU6 452 aa7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 C9orf78Q9NZ63 289 aaPredicted RBP7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 UTYO14607 1347 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 ATRNO75882 1429 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 IL2RAP01589 272 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 CTSOP43234 321 aaPredicted RBP7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 CENPCQ03188 943 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 CLN3Q13286 438 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 ANKRD45Q5TZF3 282 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 NBPF10Q6P3W6 841 aaKnown RBP7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 DNAJC10Q8IXB1 793 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 NBPF15Q8N660 670 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 TPCN2Q8NHX9 752 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 ACSBG1Q96GR2 724 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 QTRT2Q9H974 415 aaKnown RBP7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 POLMQ9NP87 494 aaPredicted RBP7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 GMPR2Q9P2T1 348 aaKnown RBP7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 SERTAD1Q9UHV2 236 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 RBM19Q9Y4C8 960 aaKnown RBP7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 UBR2Q8IWV8 1755 aa7.54□□□□□ -1.2
SMNDC1-204ENST00000471297 TOGARAM1Q9Y4F4 1720 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 NEURL1BA8MQ27 555 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L15C9J2P7 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L10C9JJH3 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L13C9JLJ4 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L12C9JPN9 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L11C9JVI0 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L21D6R901 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L18D6R9N7 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L22D6RA61 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L17D6RBQ6 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L19D6RCP7 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L20D6RJB6 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 GRM8O00222 908 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 DKK1O94907 266 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 ATG7O95352 703 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 CYP19A1P11511 503 aaPredicted RBP7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 RNF144AP50876 292 aaPredicted RBP7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 USP17L24Q0WX57 530 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 DPYDQ12882 1025 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 GCKRQ14397 625 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 NPM2Q86SE8 214 aaKnown RBP7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 ANKMY2Q8IV38 441 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 MYD88Q99836 296 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 SENP2Q9HC62 589 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 LRRFIP2Q9Y608 721 aaKnown RBP7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 C5P01031 1676 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 LAMB4A4D0S4 1761 aa7.53□□□□□ -1.2
SMNDC1-204ENST00000471297 GLI3P10071 1580 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 LOC102724428A0A0B4J2F2 783 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 FIGNL2A6NMB9 653 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 TTLL8A6PVC2 850 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 SFI1A8K8P3 1242 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 BACH1O14867 736 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 RAB11FIP3O75154 756 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 IGKV5-2P06315 115 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 NBPF7P0C2Y1 421 aaPredicted RBP7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 HMGB2P26583 209 aaKnown RBP7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 IL6STP40189 918 aaPredicted RBP7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 SIK1P57059 783 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 MTX1Q13505 466 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 CWF19L2Q2TBE0 894 aaKnown RBP7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 HSP90AB4PQ58FF6 505 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 HSP90AB3PQ58FF7 597 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 ZNF772Q68DY9 489 aaPredicted RBP7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 KIF6Q6ZMV9 814 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 SIX5Q8N196 739 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 FAM200AQ8TCP9 573 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 SSH3Q8TE77 659 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 BACH2Q9BYV9 841 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 ZNF358Q9NW07 568 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 HRH3Q9Y5N1 445 aa7.52□□□□□ -1.21
SMNDC1-204ENST00000471297 N4BP2Q86UW6 1770 aaPredicted RBP7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 COL15A1P39059 1388 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 ITGB4P16144 1822 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 POTECB2RU33 542 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 ERVV-1B6SEH8 477 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 GPC1P35052 558 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 PIP4K2AP48426 406 aaPredicted RBP7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 SEC13P55735 322 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 TRIM28Q13263 835 aaKnown RBP7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 TCIRG1Q13488 830 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 TTLL7Q6ZT98 887 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 PPP1R42Q7Z4L9 355 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 SKAP1Q86WV1 359 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 CCDC191Q8NCU4 936 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 KIFC2Q96AC6 838 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 SLC4A9Q96Q91 983 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 GRIP2Q9C0E4 1043 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 LNPKQ9C0E8 428 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 NOVA2Q9UNW9 492 aaKnown RBP7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 MAP3K15Q6ZN16 1313 aa7.51□□□□□ -1.21
SMNDC1-204ENST00000471297 THSD7AQ9UPZ6 1657 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms