RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 CHMP5Q9NZZ3 219 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 PKD2L1Q9P0L9 805 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 CHPF2Q9P2E5 772 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 SALL3Q9BXA9 1300 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 SIPA1L3O60292 1781 aaPredicted RBP6.89□□□□□ -1.31
HDAC8-216ENST00000470998 ARFGEF1Q9Y6D6 1849 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 BRCA1P38398 1863 aaKnown RBP6.89□□□□□ -1.31
HDAC8-216ENST00000470998 CACNA1FO60840 1977 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 TTC41PQ6P2S7 1318 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 PRAMEF22A3QJZ6 481 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 KLRG2A4D1S0 409 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-216ENST00000470998 F6X3S4 739 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 NFKBIEO00221 500 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 ERC2O15083 957 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 NPR1P16066 1061 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 PDE1AP54750 535 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 SH3BP2P78314 561 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 SKOR1P84550 965 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 RASSF7Q02833 373 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 NBPF10Q6P3W6 841 aaKnown RBP6.88□□□□□ -1.31
HDAC8-216ENST00000470998 NBPF15Q8N660 670 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 BANK1Q8NDB2 785 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 GPKOWQ92917 476 aaPredicted RBP eCLIP6.88□□□□□ -1.311e-19■■■■■ 59.4
HDAC8-216ENST00000470998 IL17RAQ96F46 866 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 NYXQ9GZU5 481 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 TAOK3Q9H2K8 898 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 ANTXR1Q9H6X2 564 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 PRM3Q9NNZ6 103 aa6.88□□□□□ -1.31
HDAC8-216ENST00000470998 NIP7Q9Y221 180 aaKnown RBP eCLIP6.88□□□□□ -1.31
HDAC8-216ENST00000470998 LRRFIP2Q9Y608 721 aaKnown RBP6.88□□□□□ -1.31
HDAC8-216ENST00000470998 SCN7AQ01118 1682 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 MAP3K15Q6ZN16 1313 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 MAGEB6P1A0A0J9YX57 407 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 PI4KAP2A4QPH2 592 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 C21orf2O43822 256 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 VEGFAP15692 232 aaPredicted RBP6.87□□□□□ -1.31
HDAC8-216ENST00000470998 SDSP20132 328 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 VARSP26640 1264 aaKnown RBP6.87□□□□□ -1.31
HDAC8-216ENST00000470998 GTF2E1P29083 439 aaPredicted RBP6.87□□□□□ -1.31
HDAC8-216ENST00000470998 ALDH1B1P30837 517 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 NFKBIBQ15653 356 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 TMEM132AQ24JP5 1023 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 CCDC93Q567U6 631 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 KIF6Q6ZMV9 814 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 TRIM67Q6ZTA4 783 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 PI4KAP1Q8N8J0 262 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 SMC1BQ8NDV3 1235 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 SNIP1Q8TAD8 396 aaKnown RBP6.87□□□□□ -1.31
HDAC8-216ENST00000470998 FAM174AQ8TBP5 190 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 RRAGCQ9HB90 399 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 FKBPLQ9UIM3 349 aa6.87□□□□□ -1.31
HDAC8-216ENST00000470998 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
HDAC8-216ENST00000470998 GRM8O00222 908 aa6.86□□□□□ -1.31
HDAC8-216ENST00000470998 HIP1O00291 1037 aa6.86□□□□□ -1.31
HDAC8-216ENST00000470998 GLRX3O76003 335 aaKnown RBP6.86□□□□□ -1.31
HDAC8-216ENST00000470998 ALDH1A1P00352 501 aa6.86□□□□□ -1.31
HDAC8-216ENST00000470998 EIF2S2P20042 333 aaKnown RBP6.86□□□□□ -1.31
HDAC8-216ENST00000470998 PIP4K2AP48426 406 aaPredicted RBP6.86□□□□□ -1.31
HDAC8-216ENST00000470998 ERFEQ4G0M1 354 aa6.86□□□□□ -1.31
HDAC8-216ENST00000470998 PARP10Q53GL7 1025 aa6.86□□□□□ -1.31
HDAC8-216ENST00000470998 CC2D2BQ6DHV5 1058 aa6.86□□□□□ -1.31
HDAC8-216ENST00000470998 PRPF40BQ6NWY9 871 aaKnown RBP6.86□□□□□ -1.31
HDAC8-216ENST00000470998 RTKN2Q8IZC4 609 aa6.86□□□□□ -1.31
HDAC8-216ENST00000470998 CLASRPQ8N2M8 674 aaKnown RBP6.86□□□□□ -1.31
HDAC8-216ENST00000470998 C7orf43Q8WVR3 580 aa6.86□□□□□ -1.31
HDAC8-216ENST00000470998 HMX1Q9NP08 348 aaPredicted RBP6.86□□□□□ -1.31
HDAC8-216ENST00000470998 C9orf78Q9NZ63 289 aaPredicted RBP6.86□□□□□ -1.31
HDAC8-216ENST00000470998 ISY1Q9ULR0 285 aaKnown RBP6.86□□□□□ -1.31
HDAC8-216ENST00000470998 WASF2Q9Y6W5 498 aa6.86□□□□□ -1.31
HDAC8-216ENST00000470998 RIC1Q4ADV7 1423 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 AFDNP55196 1824 aaKnown RBP6.85□□□□□ -1.31
HDAC8-216ENST00000470998 RFX7Q2KHR2 1363 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 RAD50Q92878 1312 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 SRGAP3O43295 1099 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 SURF6O75683 361 aaKnown RBP6.85□□□□□ -1.31
HDAC8-216ENST00000470998 FKBP4Q02790 459 aaKnown RBP eCLIP6.85□□□□□ -1.31
HDAC8-216ENST00000470998 HLFQ16534 295 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 CRY2Q49AN0 593 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 HSP90AB3PQ58FF7 597 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 PPP1R42Q7Z4L9 355 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 CNTROBQ8N137 903 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 RUFY2Q8WXA3 655 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 FOXJ1Q92949 421 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 GBP4Q96PP9 640 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 ARHGAP9Q9BRR9 750 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 PHAXQ9H814 394 aaKnown RBP6.85□□□□□ -1.31
HDAC8-216ENST00000470998 CWC22Q9HCG8 908 aaKnown RBP6.85□□□□□ -1.31
HDAC8-216ENST00000470998 EXOC6BQ9Y2D4 811 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 MAP3K2Q9Y2U5 619 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 DLEC1Q9Y238 1755 aa6.85□□□□□ -1.31
HDAC8-216ENST00000470998 GOLGB1Q14789 3259 aaKnown RBP6.84□□□□□ -1.31
HDAC8-216ENST00000470998 PNMA6EA0A0J9YXQ4 647 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 IQCA1LA6NCM1 817 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 DGAT1O75907 488 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 HSP90AA1P07900 732 aaKnown RBP6.84□□□□□ -1.31
HDAC8-216ENST00000470998 MYL6BP14649 208 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 PRELPP51888 382 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 PTK2Q05397 1052 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 ARID5BQ14865 1188 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 ZBTB33Q86T24 672 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms