RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 CCDC40Q4G0X9 1142 aa11.95□□□□□ -0.5
RRP1B-202ENST00000470886 TSGA10Q9BZW7 698 aa11.95□□□□□ -0.5
RRP1B-202ENST00000470886 KCNH3Q9ULD8 1083 aa11.95□□□□□ -0.5
RRP1B-202ENST00000470886 ZNF202O95125 648 aa11.95□□□□□ -0.5
RRP1B-202ENST00000470886 GPTP24298 496 aa11.95□□□□□ -0.5
RRP1B-202ENST00000470886 AFMP43652 599 aa11.95□□□□□ -0.5
RRP1B-202ENST00000470886 ATP2B2Q01814 1243 aa11.95□□□□□ -0.5
RRP1B-202ENST00000470886 PPP2R3AQ06190 1150 aa11.95□□□□□ -0.5
RRP1B-202ENST00000470886 CCDC172P0C7W6 258 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 RBM6P78332 1123 aaKnown RBP11.94□□□□□ -0.5
RRP1B-202ENST00000470886 MTX1Q13505 466 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 RAB11FIP4Q86YS3 637 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 LRRC59Q96AG4 307 aaKnown RBP11.94□□□□□ -0.5
RRP1B-202ENST00000470886 KIF2CQ99661 725 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 DBNDD2Q9BQY9 259 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 RFX7Q2KHR2 1363 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 CLGNO14967 610 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 DHX58Q96C10 678 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 MON2Q7Z3U7 1717 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 CYP7A1P22680 504 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 ZNF76P36508 570 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 IFFO1Q0D2I5 559 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 MCM6Q14566 821 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 SEPT7Q16181 437 aaKnown RBP11.94□□□□□ -0.5
RRP1B-202ENST00000470886 STXBP4Q6ZWJ1 553 aa11.94□□□□□ -0.5
RRP1B-202ENST00000470886 JARID2Q92833 1246 aaPredicted RBP11.94□□□□□ -0.5
RRP1B-202ENST00000470886 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.94□□□□□ -0.5
RRP1B-202ENST00000470886 A0A1B0GUL7 405 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 A0A1W2PQ27 194 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 A0A1W2PQ64 194 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 A0A1W2PQD8 194 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
RRP1B-202ENST00000470886 POTEJP0CG39 1038 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 GIMAP7Q8NHV1 300 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 CCDC51Q96ER9 411 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 TMX1Q9H3N1 280 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 C19orf44Q9H6X5 657 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 LUC7L2Q9Y383 392 aaKnown RBP11.93□□□□□ -0.5
RRP1B-202ENST00000470886 OVOS2A0A0G2JMS6 1433 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 EXOC5O00471 708 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 FCHSD1Q86WN1 690 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 ZSWIM4Q9H7M6 989 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 CAPN2P17655 700 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 CETN1Q12798 172 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 TMTC1Q8IUR5 882 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 ZNF569Q5MCW4 686 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 TTC6Q86TZ1 520 aa11.93□□□□□ -0.5
RRP1B-202ENST00000470886 USP42Q9H9J4 1324 aaKnown RBP11.92□□□□□ -0.5
RRP1B-202ENST00000470886 FAM173BQ6P4H8 233 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 ARFGAP2Q8N6H7 521 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 IQCDQ96DY2 449 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 SLC52A2Q9HAB3 445 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 TPCN1Q9ULQ1 816 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 RIMBP3CA6NJZ7 1639 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 RIMBP3BA6NNM3 1639 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 RIMBP3Q9UFD9 1639 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 GOLGA6L10A0A0M3HER8 536 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 U2AF2P26368 475 aaKnown RBP eCLIP11.92□□□□□ -0.5
RRP1B-202ENST00000470886 PDLIM2Q96JY6 352 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 SELENOOQ9BVL4 669 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 MYO5BQ9ULV0 1848 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 PPFIA3O75145 1194 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 CYP2E1P05181 493 aaPredicted RBP11.92□□□□□ -0.5
RRP1B-202ENST00000470886 LIG1P18858 919 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 PTH1RQ03431 593 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 TNIP1Q15025 636 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 CCDC96Q2M329 555 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 UTP14CQ5TAP6 766 aaKnown RBP11.92□□□□□ -0.5
RRP1B-202ENST00000470886 WWC2Q6AWC2 1192 aa11.92□□□□□ -0.5
RRP1B-202ENST00000470886 NAPGQ99747 312 aaPredicted RBP11.92□□□□□ -0.5
RRP1B-202ENST00000470886 SEPT11Q9NVA2 429 aaKnown RBP11.92□□□□□ -0.5
RRP1B-202ENST00000470886 ATP8B1O43520 1251 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 GIGYF1O75420 1035 aaPredicted RBP11.91□□□□□ -0.5
RRP1B-202ENST00000470886 TRAF1Q13077 416 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 NBPF6Q5VWK0 638 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 CYP26C1Q6V0L0 522 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 TRIML1Q8N9V2 468 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 NBPF4Q96M43 638 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 CCDC42Q96M95 316 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 EHMT1Q9H9B1 1298 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 GPR108Q9NPR9 543 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 MAGEB6P1A0A0J9YX57 407 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 PRPHP41219 470 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 HLTFQ14527 1009 aaKnown RBP eCLIP11.91□□□□□ -0.56e-6■■■■□ 22
RRP1B-202ENST00000470886 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 GIGYF2Q6Y7W6 1299 aaKnown RBP11.91□□□□□ -0.5
RRP1B-202ENST00000470886 LRRC8AQ8IWT6 810 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 GPR161Q8N6U8 529 aaKnown RBP11.91□□□□□ -0.5
RRP1B-202ENST00000470886 KIAA1524Q8TCG1 905 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 LMBR1Q8WVP7 490 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 INCENPQ9NQS7 918 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 E7EWF7 191 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 CMA1P23946 247 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 SMC1AQ14683 1233 aaKnown RBP11.91□□□□□ -0.5
RRP1B-202ENST00000470886 CHST3Q7LGC8 479 aa11.91□□□□□ -0.5
RRP1B-202ENST00000470886 RPGRIP1Q96KN7 1286 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms