RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 DZIP1Q86YF9 867 aaKnown RBP9.91□□□□□ -0.82
GTF3A-206ENST00000470606 MKRN1Q9UHC7 482 aaKnown RBP9.91□□□□□ -0.82
GTF3A-206ENST00000470606 CTNNA3Q9UI47 895 aa9.91□□□□□ -0.82
GTF3A-206ENST00000470606 PSME4Q14997 1843 aa9.91□□□□□ -0.82
GTF3A-206ENST00000470606 TIAM2Q8IVF5 1701 aa9.9□□□□□ -0.82
GTF3A-206ENST00000470606 ZNF213O14771 459 aa9.9□□□□□ -0.82
GTF3A-206ENST00000470606 PSMA5P28066 241 aa9.9□□□□□ -0.82
GTF3A-206ENST00000470606 POLD1P28340 1107 aa9.9□□□□□ -0.82
GTF3A-206ENST00000470606 PKP1Q13835 747 aa9.9□□□□□ -0.82
GTF3A-206ENST00000470606 KRT32Q14532 448 aa9.9□□□□□ -0.82
GTF3A-206ENST00000470606 IMMTQ16891 758 aaKnown RBP9.9□□□□□ -0.82
GTF3A-206ENST00000470606 SPTY2D1Q68D10 685 aaPredicted RBP9.9□□□□□ -0.82
GTF3A-206ENST00000470606 MB21D2Q8IYB1 491 aaPredicted RBP9.9□□□□□ -0.82
GTF3A-206ENST00000470606 NLGN2Q8NFZ4 835 aa9.9□□□□□ -0.82
GTF3A-206ENST00000470606 ALDH8A1Q9H2A2 487 aaPredicted RBP9.9□□□□□ -0.82
GTF3A-206ENST00000470606 PPP1R1BQ9UD71 204 aaPredicted RBP9.9□□□□□ -0.82
GTF3A-206ENST00000470606 LIMCH1Q9UPQ0 1083 aa9.9□□□□□ -0.82
GTF3A-206ENST00000470606 NEDD4P46934 1319 aa9.9□□□□□ -0.82
GTF3A-206ENST00000470606 ECE2O60344 883 aa9.9□□□□□ -0.83
GTF3A-206ENST00000470606 DACT2Q5SW24 774 aa9.9□□□□□ -0.83
GTF3A-206ENST00000470606 CC2D2BQ6DHV5 1058 aa9.9□□□□□ -0.83
GTF3A-206ENST00000470606 DHX32Q7L7V1 743 aaKnown RBP9.9□□□□□ -0.83
GTF3A-206ENST00000470606 PODNQ7Z5L7 613 aa9.9□□□□□ -0.83
GTF3A-206ENST00000470606 SH3RF3Q8TEJ3 882 aaPredicted RBP9.9□□□□□ -0.83
GTF3A-206ENST00000470606 EYA3Q99504 573 aa9.9□□□□□ -0.83
GTF3A-206ENST00000470606 NAPBQ9H115 298 aa9.9□□□□□ -0.83
GTF3A-206ENST00000470606 DCP1AQ9NPI6 582 aaPredicted RBP9.9□□□□□ -0.83
GTF3A-206ENST00000470606 ZNF277Q9NRM2 450 aaPredicted RBP9.9□□□□□ -0.83
GTF3A-206ENST00000470606 PIM2Q9P1W9 311 aa9.9□□□□□ -0.83
GTF3A-206ENST00000470606 PCDHAC2Q9Y5I4 1007 aa9.9□□□□□ -0.83
GTF3A-206ENST00000470606 FOCADQ5VW36 1801 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 MROH7-TTC4A0A0A0MT08 1334 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 GAKO14976 1311 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 GPR75-ASB3A0A0A6YYF3 556 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 F8W031 263 aaPredicted RBP9.89□□□□□ -0.83
GTF3A-206ENST00000470606 CYP2D6P10635 497 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 GNAT2P19087 354 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 MCM2P49736 904 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 RHBDL3P58872 404 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 PPP4CP60510 307 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 CCDC93Q567U6 631 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 CTR9Q6PD62 1173 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 Q6ZUG5 572 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 CYB5R4Q7L1T6 521 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 STK11IPQ8N1F8 1099 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 NECAB1Q8N987 351 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 TBC1D22AQ8WUA7 517 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 FAM163AQ96GL9 167 aaPredicted RBP9.89□□□□□ -0.83
GTF3A-206ENST00000470606 PSMD1Q99460 953 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 AGXT2Q9BYV1 514 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 TMX4Q9H1E5 349 aaPredicted RBP9.89□□□□□ -0.83
GTF3A-206ENST00000470606 LAMB1P07942 1786 aa9.89□□□□□ -0.83
GTF3A-206ENST00000470606 DDX60LQ5H9U9 1706 aaKnown RBP9.88□□□□□ -0.83
GTF3A-206ENST00000470606 PPIP5K2O43314 1243 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 BTDP43251 543 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 TDO2P48775 406 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 SCNN1DP51172 638 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 PRELPP51888 382 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 KLHL34Q8N239 644 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 FBXW7Q969H0 707 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 SENP2Q9HC62 589 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 DAGLAQ9Y4D2 1042 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 CD2APQ9Y5K6 639 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 B4E1Z4 1266 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 USP17L12C9JPN9 530 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 USP17L21D6R901 530 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 NFKBIEO00221 500 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 PPARAQ07869 468 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 STRIP1Q5VSL9 837 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 BRF1Q92994 677 aa9.88□□□□□ -0.83
GTF3A-206ENST00000470606 NAV1Q8NEY1 1877 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 MYH1P12882 1939 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 ECM29Q5VYK3 1845 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 HSP90AA1P07900 732 aaKnown RBP9.87□□□□□ -0.83
GTF3A-206ENST00000470606 USP17L8P0C7I0 530 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 SLC4A8Q2Y0W8 1093 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 DALRD3Q5D0E6 543 aaKnown RBP9.87□□□□□ -0.83
GTF3A-206ENST00000470606 AKNAD1Q5T1N1 836 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 TMED8Q6PL24 325 aaPredicted RBP9.87□□□□□ -0.83
GTF3A-206ENST00000470606 RTKN2Q8IZC4 609 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 ZSWIM5Q9P217 1185 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 ANAPC4Q9UJX5 808 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 TTF2Q9UNY4 1162 aaKnown RBP9.87□□□□□ -0.83
GTF3A-206ENST00000470606 ZDHHC9Q9Y397 364 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 ARFGEF1Q9Y6D6 1849 aa9.87□□□□□ -0.83
GTF3A-206ENST00000470606 MINDY4BA8MYZ0 360 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 PRC1O43663 620 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 IGSF3O75054 1194 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 HMGB1P09429 215 aaKnown RBP9.86□□□□□ -0.83
GTF3A-206ENST00000470606 APOBRQ0VD83 1088 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 APOBEC3HQ6NTF7 200 aaKnown RBP9.86□□□□□ -0.83
GTF3A-206ENST00000470606 GIMAP6Q6P9H5 292 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 KIAA0825Q8IV33 1275 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 CCDC83Q8IWF9 413 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 FBXL16Q8N461 479 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 NCOA7Q8NI08 942 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 TGFBRAP1Q8WUH2 860 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 STAG1Q8WVM7 1258 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 CRNKL1Q9BZJ0 848 aaKnown RBP9.86□□□□□ -0.83
GTF3A-206ENST00000470606 NACAP1Q9BZK3 213 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms