RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NOL7Q9UMY1 257 aaKnown RBP9.41□□□□□ -0.9
SMC4-212ENST00000470240 COL14A1Q05707 1796 aaKnown RBP9.41□□□□□ -0.9
SMC4-212ENST00000470240 LRP6O75581 1613 aa9.41□□□□□ -0.9
SMC4-212ENST00000470240 CDHR2Q9BYE9 1310 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 A0A1B0GUL7 405 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 DHX16O60231 1041 aaKnown RBP9.4□□□□□ -0.9
SMC4-212ENST00000470240 GADD45BO75293 160 aaPredicted RBP9.4□□□□□ -0.9
SMC4-212ENST00000470240 PDE4DQ08499 809 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 TOB2Q14106 344 aaPredicted RBP9.4□□□□□ -0.9
SMC4-212ENST00000470240 TTF1Q15361 905 aaPredicted RBP9.4□□□□□ -0.9
SMC4-212ENST00000470240 MAP3K11Q16584 847 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 IMMTQ16891 758 aaKnown RBP9.4□□□□□ -0.9
SMC4-212ENST00000470240 ZMYM1Q5SVZ6 1142 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 ATL3Q6DD88 541 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 RNF19BQ6ZMZ0 732 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 Q6ZUG5 572 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 ATG9AQ7Z3C6 839 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 ZBTB38Q8NAP3 1195 aaPredicted RBP9.4□□□□□ -0.9
SMC4-212ENST00000470240 THAP11Q96EK4 314 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 ZNF396Q96N95 335 aaPredicted RBP9.4□□□□□ -0.9
SMC4-212ENST00000470240 ISCA1Q9BUE6 129 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 PLA2G12BQ9BX93 195 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 NUP62CLQ9H1M0 184 aa9.4□□□□□ -0.9
SMC4-212ENST00000470240 DDX19AQ9NUU7 478 aaKnown RBP9.4□□□□□ -0.9
SMC4-212ENST00000470240 CCDC9Q9Y3X0 531 aaKnown RBP9.4□□□□□ -0.9
SMC4-212ENST00000470240 V9GY48 417 aaPredicted RBP9.4□□□□□ -0.9
SMC4-212ENST00000470240 MAP3K15Q6ZN16 1313 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 ANKRD18BA2A2Z9 1011 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 CAVIN2O95810 425 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 FKBP4Q02790 459 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMC4-212ENST00000470240 STK3Q13188 491 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 WASHC4Q2M389 1173 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 BRICD5Q6PL45 260 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 CDC37L1Q7L3B6 337 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 BICD2Q8TD16 824 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 HLA-CQ95604 372 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 EDC3Q96F86 508 aaKnown RBP9.39□□□□□ -0.91
SMC4-212ENST00000470240 CHAMP1Q96JM3 812 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 BEGAINQ9BUH8 593 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 TNMDQ9H2S6 317 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 NAP1L2Q9ULW6 460 aaPredicted RBP9.39□□□□□ -0.91
SMC4-212ENST00000470240 NSFL1CQ9UNZ2 370 aaKnown RBP9.39□□□□□ -0.91
SMC4-212ENST00000470240 ZKSCAN5Q9Y2L8 839 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.39□□□□□ -0.91
SMC4-212ENST00000470240 ANKRD36CQ5JPF3 1778 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 PLCH1Q4KWH8 1693 aa9.39□□□□□ -0.91
SMC4-212ENST00000470240 STRCQ7RTU9 1775 aa9.38□□□□□ -0.91
SMC4-212ENST00000470240 ZNF500O60304 480 aaPredicted RBP9.38□□□□□ -0.91
SMC4-212ENST00000470240 PFKFB2O60825 505 aa9.38□□□□□ -0.91
SMC4-212ENST00000470240 TRDNQ13061 729 aa9.38□□□□□ -0.91
SMC4-212ENST00000470240 METTL24Q5JXM2 366 aa9.38□□□□□ -0.91
SMC4-212ENST00000470240 NAA16Q6N069 864 aaPredicted RBP9.38□□□□□ -0.91
SMC4-212ENST00000470240 CCDC129Q6ZRS4 1044 aa9.38□□□□□ -0.91
SMC4-212ENST00000470240 RALYLQ86SE5 291 aaKnown RBP9.38□□□□□ -0.91
SMC4-212ENST00000470240 BRF1Q92994 677 aa9.38□□□□□ -0.91
SMC4-212ENST00000470240 CDCA7Q9BWT1 371 aaPredicted RBP9.38□□□□□ -0.91
SMC4-212ENST00000470240 TOGARAM1Q9Y4F4 1720 aa9.38□□□□□ -0.91
SMC4-212ENST00000470240 MYH3P11055 1940 aa9.38□□□□□ -0.91
SMC4-212ENST00000470240 MAST3O60307 1309 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 MYH7P12883 1935 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 CTAGE5O15320 804 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 CYP21A2P08686 494 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 UQCRFS1P1P0C7P4 283 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 HSPD1P10809 573 aaKnown RBP9.37□□□□□ -0.91
SMC4-212ENST00000470240 TERF1P54274 439 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 TIMM10P62072 90 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 GUCA2AQ02747 115 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 ATP2B3Q16720 1220 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 LRRC24Q50LG9 513 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 SASS6Q6UVJ0 657 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 APPBP2Q92624 585 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 XAGE2Q96GT9 111 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 TCEANC2Q96MN5 208 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 CNNM1Q9NRU3 951 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 ITGB4P16144 1822 aa9.37□□□□□ -0.91
SMC4-212ENST00000470240 WDR19Q8NEZ3 1342 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 ZNF335Q9H4Z2 1342 aaPredicted RBP9.36□□□□□ -0.91
SMC4-212ENST00000470240 LAMA4Q16363 1823 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 ERVV-1B6SEH8 477 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 EXOC5O00471 708 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 CPLX1O14810 134 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 OFD1O75665 1012 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 ST3GAL1Q11201 340 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 MSS51Q4VC12 460 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 CPLX2Q6PUV4 134 aaKnown RBP9.36□□□□□ -0.91
SMC4-212ENST00000470240 CCDC73Q6ZRK6 1079 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 FERMT3Q86UX7 667 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 DNAJC10Q8IXB1 793 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 NCOA7Q8NI08 942 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 SPIRE2Q8WWL2 714 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 ZNF274Q96GC6 653 aaPredicted RBP9.36□□□□□ -0.91
SMC4-212ENST00000470240 ZNF594Q96JF6 807 aaPredicted RBP9.36□□□□□ -0.91
SMC4-212ENST00000470240 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
SMC4-212ENST00000470240 PRDM9Q9NQV7 894 aa9.36□□□□□ -0.91
SMC4-212ENST00000470240 MYH15Q9Y2K3 1946 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 PTPDC1A2A3K4 754 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 E7EWF7 191 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 PDE8AO60658 829 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 CDKL5O76039 1030 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms