RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 NEDD4P46934 1319 aa21.43■■□□□ 1.02
SMC4-211ENST00000469858 ANTXR2P58335 489 aa21.42■■□□□ 1.02
SMC4-211ENST00000469858 GTF3C6Q969F1 213 aa21.42■■□□□ 1.02
SMC4-211ENST00000469858 COA1Q9GZY4 146 aa21.42■■□□□ 1.02
SMC4-211ENST00000469858 ZNF219Q9P2Y4 722 aaPredicted RBP21.42■■□□□ 1.02
SMC4-211ENST00000469858 B4E1Z4 1266 aa21.41■■□□□ 1.02
SMC4-211ENST00000469858 CNKSR1Q969H4 720 aa21.41■■□□□ 1.02
SMC4-211ENST00000469858 C10orf71Q711Q0 1435 aa21.41■■□□□ 1.02
SMC4-211ENST00000469858 IGSF3O75054 1194 aa21.41■■□□□ 1.02
SMC4-211ENST00000469858 DIXDC1Q155Q3 683 aa21.41■■□□□ 1.02
SMC4-211ENST00000469858 MFSD14BQ5SR56 506 aa21.41■■□□□ 1.02
SMC4-211ENST00000469858 SLC16A10Q8TF71 515 aa21.41■■□□□ 1.02
SMC4-211ENST00000469858 CRNKL1Q9BZJ0 848 aaKnown RBP21.41■■□□□ 1.02
SMC4-211ENST00000469858 INCENPQ9NQS7 918 aa21.41■■□□□ 1.02
SMC4-211ENST00000469858 GPHNQ9NQX3 736 aaPredicted RBP21.41■■□□□ 1.02
SMC4-211ENST00000469858 NAP1L2Q9ULW6 460 aaPredicted RBP21.41■■□□□ 1.02
SMC4-211ENST00000469858 MINDY4BA8MYZ0 360 aa21.4■■□□□ 1.02
SMC4-211ENST00000469858 BRD1O95696 1058 aa21.4■■□□□ 1.02
SMC4-211ENST00000469858 GSTO1P78417 241 aa21.4■■□□□ 1.02
SMC4-211ENST00000469858 AKNAD1Q5T1N1 836 aa21.4■■□□□ 1.02
SMC4-211ENST00000469858 FBXL16Q8N461 479 aa21.4■■□□□ 1.02
SMC4-211ENST00000469858 WDR19Q8NEZ3 1342 aa21.4■■□□□ 1.02
SMC4-211ENST00000469858 NKX2-3Q8TAU0 364 aa21.4■■□□□ 1.02
SMC4-211ENST00000469858 DLEC1Q9Y238 1755 aa21.4■■□□□ 1.02
SMC4-211ENST00000469858 GTF2IP78347 998 aa21.39■■□□□ 1.02
SMC4-211ENST00000469858 PPARAQ07869 468 aa21.39■■□□□ 1.02
SMC4-211ENST00000469858 CYB5R4Q7L1T6 521 aa21.39■■□□□ 1.02
SMC4-211ENST00000469858 STK11IPQ8N1F8 1099 aa21.39■■□□□ 1.02
SMC4-211ENST00000469858 DDX11L8A8MPP1 907 aa21.39■■□□□ 1.01
SMC4-211ENST00000469858 BAG4O95429 457 aaKnown RBP21.39■■□□□ 1.01
SMC4-211ENST00000469858 SCRN1Q12765 414 aa21.39■■□□□ 1.01
SMC4-211ENST00000469858 MFSD6Q6ZSS7 791 aa21.39■■□□□ 1.01
SMC4-211ENST00000469858 TBC1D22AQ8WUA7 517 aa21.39■■□□□ 1.01
SMC4-211ENST00000469858 FBXW7Q969H0 707 aa21.39■■□□□ 1.01
SMC4-211ENST00000469858 EYA3Q99504 573 aa21.39■■□□□ 1.01
SMC4-211ENST00000469858 TACC3Q9Y6A5 838 aa21.39■■□□□ 1.01
SMC4-211ENST00000469858 LAMB1P07942 1786 aa21.38■■□□□ 1.01
SMC4-211ENST00000469858 FAM205AQ6ZU69 1335 aa21.38■■□□□ 1.01
SMC4-211ENST00000469858 PFKFB2O60825 505 aa21.38■■□□□ 1.01
SMC4-211ENST00000469858 DOK7Q18PE1 504 aa21.38■■□□□ 1.01
SMC4-211ENST00000469858 CLEC17AQ6ZS10 378 aa21.38■■□□□ 1.01
SMC4-211ENST00000469858 STAG1Q8WVM7 1258 aa21.38■■□□□ 1.01
SMC4-211ENST00000469858 CNNM2Q9H8M5 875 aa21.38■■□□□ 1.01
SMC4-211ENST00000469858 WDR33Q9C0J8 1336 aaKnown RBP21.38■■□□□ 1.01
SMC4-211ENST00000469858 G3V3G9 751 aa21.37■■□□□ 1.01
SMC4-211ENST00000469858 SYT1P21579 422 aa21.37■■□□□ 1.01
SMC4-211ENST00000469858 DCAF8Q5TAQ9 597 aa21.37■■□□□ 1.01
SMC4-211ENST00000469858 GIMAP6Q6P9H5 292 aa21.37■■□□□ 1.01
SMC4-211ENST00000469858 TOMM22Q9NS69 142 aa21.37■■□□□ 1.01
SMC4-211ENST00000469858 MROH7-TTC4A0A0A0MT08 1334 aa21.37■■□□□ 1.01
SMC4-211ENST00000469858 LDHCP07864 332 aa21.37■■□□□ 1.01
SMC4-211ENST00000469858 RRP12Q5JTH9 1297 aaKnown RBP21.37■■□□□ 1.01
SMC4-211ENST00000469858 ZNF274Q96GC6 653 aaPredicted RBP21.37■■□□□ 1.01
SMC4-211ENST00000469858 KRT23Q9C075 422 aa21.37■■□□□ 1.01
SMC4-211ENST00000469858 CYP2D7A0A087X1C5 515 aa21.36■■□□□ 1.01
SMC4-211ENST00000469858 STX6O43752 255 aa21.36■■□□□ 1.01
SMC4-211ENST00000469858 KDM4AO75164 1064 aa21.36■■□□□ 1.01
SMC4-211ENST00000469858 PDIA3P30101 505 aaKnown RBP21.36■■□□□ 1.01
SMC4-211ENST00000469858 CCT2P78371 535 aaKnown RBP21.36■■□□□ 1.01
SMC4-211ENST00000469858 NOL10Q9BSC4 688 aaKnown RBP21.36■■□□□ 1.01
SMC4-211ENST00000469858 RNF41Q9H4P4 317 aaPredicted RBP21.36■■□□□ 1.01
SMC4-211ENST00000469858 DCP1AQ9NPI6 582 aaPredicted RBP21.36■■□□□ 1.01
SMC4-211ENST00000469858 SMIM22K7EJ46 135 aa21.36■■□□□ 1.01
SMC4-211ENST00000469858 BAG3O95817 575 aa21.36■■□□□ 1.01
SMC4-211ENST00000469858 EVCP57679 992 aa21.36■■□□□ 1.01
SMC4-211ENST00000469858 ATP8A2Q9NTI2 1148 aa21.36■■□□□ 1.01
SMC4-211ENST00000469858 ANAPC4Q9UJX5 808 aa21.36■■□□□ 1.01
SMC4-211ENST00000469858 KLF18A0A0U1RQI7 1052 aa21.35■■□□□ 1.01
SMC4-211ENST00000469858 JAK2O60674 1132 aa21.35■■□□□ 1.01
SMC4-211ENST00000469858 CTR9Q6PD62 1173 aa21.35■■□□□ 1.01
SMC4-211ENST00000469858 ZSWIM5Q9P217 1185 aa21.35■■□□□ 1.01
SMC4-211ENST00000469858 BRPF3Q9ULD4 1205 aa21.35■■□□□ 1.01
SMC4-211ENST00000469858 ANGEL1Q9UNK9 670 aaKnown RBP21.35■■□□□ 1.01
SMC4-211ENST00000469858 CDK5RAP2Q96SN8 1893 aa21.35■■□□□ 1.01
SMC4-211ENST00000469858 USP17L12C9JPN9 530 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 USP17L21D6R901 530 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 SH2B2O14492 632 aaPredicted RBP21.34■■□□□ 1.01
SMC4-211ENST00000469858 ZBTB7AO95365 584 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 SH3RF3Q8TEJ3 882 aaPredicted RBP21.34■■□□□ 1.01
SMC4-211ENST00000469858 C7orf43Q8WVR3 580 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 RTFDC1Q9BY42 306 aaPredicted RBP21.34■■□□□ 1.01
SMC4-211ENST00000469858 NCOA5Q9HCD5 579 aaKnown RBP21.34■■□□□ 1.01
SMC4-211ENST00000469858 NAV1Q8NEY1 1877 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 KIF13BQ9NQT8 1826 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 GOLGA8BA8MQT2 603 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 GOLGA6L22H0YM25 854 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 MCTP1Q6DN14 999 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 TMEM87BQ96K49 555 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 DBNDD1Q9H9R9 158 aa21.34■■□□□ 1.01
SMC4-211ENST00000469858 BTDP43251 543 aa21.33■■□□□ 1.01
SMC4-211ENST00000469858 USP5P45974 858 aa21.33■■□□□ 1.01
SMC4-211ENST00000469858 CHAMP1Q96JM3 812 aa21.33■■□□□ 1.01
SMC4-211ENST00000469858 ZSCAN22P10073 491 aaPredicted RBP21.32■■□□□ 1
SMC4-211ENST00000469858 PPP4CP60510 307 aa21.32■■□□□ 1
SMC4-211ENST00000469858 LARP1BQ659C4 914 aaKnown RBP21.32■■□□□ 1
SMC4-211ENST00000469858 RAB11FIP4Q86YS3 637 aa21.32■■□□□ 1
SMC4-211ENST00000469858 SLF2Q8IX21 1173 aa21.32■■□□□ 1
SMC4-211ENST00000469858 ARPP21Q9UBL0 812 aaPredicted RBP21.32■■□□□ 1
SMC4-211ENST00000469858 VPS37CA5D8V6 355 aaPredicted RBP21.32■■□□□ 1
SMC4-211ENST00000469858 C21orf2O43822 256 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms