RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 RREB1Q92766 1687 aa17.1■□□□□ 0.33
CBWD3-205ENST00000469687 PATL2C9JE40 543 aaKnown RBP17.1■□□□□ 0.33
CBWD3-205ENST00000469687 CTAGE5O15320 804 aa17.1■□□□□ 0.33
CBWD3-205ENST00000469687 KCNQ2O43526 872 aa17.1■□□□□ 0.33
CBWD3-205ENST00000469687 MAP3K12Q12852 859 aa17.1■□□□□ 0.33
CBWD3-205ENST00000469687 LRMPQ12912 555 aa17.1■□□□□ 0.33
CBWD3-205ENST00000469687 STX1AQ16623 288 aa17.1■□□□□ 0.33
CBWD3-205ENST00000469687 LCORLQ8N3X6 602 aa17.1■□□□□ 0.33
CBWD3-205ENST00000469687 NAPBQ9H115 298 aa17.1■□□□□ 0.33
CBWD3-205ENST00000469687 LY9Q9HBG7 655 aa17.1■□□□□ 0.33
CBWD3-205ENST00000469687 IQSEC3Q9UPP2 1182 aaPredicted RBP17.1■□□□□ 0.33
CBWD3-205ENST00000469687 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 RBM10P98175 930 aaKnown RBP17.09■□□□□ 0.33
CBWD3-205ENST00000469687 SF3A1Q15459 793 aaKnown RBP17.09■□□□□ 0.33
CBWD3-205ENST00000469687 CCDC152Q4G0S7 254 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 DRC7Q8IY82 874 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 ALG1Q9BT22 464 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 FAM217BQ9NTX9 383 aaPredicted RBP17.09■□□□□ 0.33
CBWD3-205ENST00000469687 POLR3EQ9NVU0 708 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 ZSWIM5Q9P217 1185 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 LAMB2P55268 1798 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 SPTLC2O15270 562 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 RANBP6O60518 1105 aaKnown RBP17.09■□□□□ 0.33
CBWD3-205ENST00000469687 CHRNDQ07001 517 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 ALX1Q15699 326 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 MIGA1Q8NAN2 632 aa17.09■□□□□ 0.33
CBWD3-205ENST00000469687 BCORQ6W2J9 1755 aa17.08■□□□□ 0.33
CBWD3-205ENST00000469687 IGHMBP2P38935 993 aaKnown RBP17.08■□□□□ 0.33
CBWD3-205ENST00000469687 NTRK3Q16288 839 aa17.08■□□□□ 0.33
CBWD3-205ENST00000469687 TMEM67Q5HYA8 995 aa17.08■□□□□ 0.33
CBWD3-205ENST00000469687 NFXL1Q6ZNB6 911 aa17.08■□□□□ 0.33
CBWD3-205ENST00000469687 BRAPQ7Z569 592 aa17.08■□□□□ 0.33
CBWD3-205ENST00000469687 DHX40Q8IX18 779 aaKnown RBP17.08■□□□□ 0.33
CBWD3-205ENST00000469687 CASZ1Q86V15 1759 aa17.08■□□□□ 0.32
CBWD3-205ENST00000469687 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-205ENST00000469687 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-205ENST00000469687 ZBTB43O43298 467 aa17.08■□□□□ 0.32
CBWD3-205ENST00000469687 YEATS4O95619 227 aa17.08■□□□□ 0.32
CBWD3-205ENST00000469687 KCNQ4P56696 695 aa17.08■□□□□ 0.32
CBWD3-205ENST00000469687 HSP90AA2PQ14568 343 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-205ENST00000469687 CCDC144BQ3MJ40 725 aa17.08■□□□□ 0.32
CBWD3-205ENST00000469687 PARP10Q53GL7 1025 aa17.08■□□□□ 0.32
CBWD3-205ENST00000469687 ANO1Q5XXA6 986 aa17.08■□□□□ 0.32
CBWD3-205ENST00000469687 C3orf67Q6ZVT6 689 aa17.08■□□□□ 0.32
CBWD3-205ENST00000469687 NUTM2AQ8IVF1 878 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-205ENST00000469687 KCNG4Q8TDN1 519 aa17.08■□□□□ 0.32
CBWD3-205ENST00000469687 TMEM87BQ96K49 555 aa17.08■□□□□ 0.32
CBWD3-205ENST00000469687 BCL9LQ86UU0 1499 aa17.07■□□□□ 0.32
CBWD3-205ENST00000469687 A0A1W2PQ27 194 aa17.07■□□□□ 0.32
CBWD3-205ENST00000469687 A0A1W2PQ64 194 aa17.07■□□□□ 0.32
CBWD3-205ENST00000469687 A0A1W2PQD8 194 aa17.07■□□□□ 0.32
CBWD3-205ENST00000469687 MARCKSP29966 332 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-205ENST00000469687 RRP12Q5JTH9 1297 aaKnown RBP17.07■□□□□ 0.32
CBWD3-205ENST00000469687 KRT40Q6A162 431 aa17.07■□□□□ 0.32
CBWD3-205ENST00000469687 SMIM5Q71RC9 77 aa17.07■□□□□ 0.32
CBWD3-205ENST00000469687 ADGRA1Q86SQ6 560 aa17.07■□□□□ 0.32
CBWD3-205ENST00000469687 VPS37DQ86XT2 251 aa17.07■□□□□ 0.32
CBWD3-205ENST00000469687 ZKSCAN3Q9BRR0 538 aa17.07■□□□□ 0.32
CBWD3-205ENST00000469687 CDCA7Q9BWT1 371 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-205ENST00000469687 MROH7-TTC4A0A0A0MT08 1334 aa17.07■□□□□ 0.32
CBWD3-205ENST00000469687 GOLGA6L19H0YKK7 550 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 WDHD1O75717 1129 aaPredicted RBP17.06■□□□□ 0.32
CBWD3-205ENST00000469687 TPM3P06753 285 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 AXDND1Q5T1B0 1012 aaPredicted RBP17.06■□□□□ 0.32
CBWD3-205ENST00000469687 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 THRAP3Q9Y2W1 955 aaKnown RBP17.06■□□□□ 0.32
CBWD3-205ENST00000469687 SLC4A4Q9Y6R1 1079 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 GOLGA8AA7E2F4 631 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 SMIM22K7EJ46 135 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 CAVIN2O95810 425 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 SGMS1Q86VZ5 419 aa17.06■□□□□ 0.32
CBWD3-205ENST00000469687 COL5A3P25940 1745 aaPredicted RBP17.05■□□□□ 0.32
CBWD3-205ENST00000469687 A0A1B0GUL6 1792 aa17.05■□□□□ 0.32
CBWD3-205ENST00000469687 IFIT3O14879 490 aaKnown RBP17.05■□□□□ 0.32
CBWD3-205ENST00000469687 AKNAD1Q5T1N1 836 aa17.05■□□□□ 0.32
CBWD3-205ENST00000469687 ANO10Q9NW15 660 aa17.05■□□□□ 0.32
CBWD3-205ENST00000469687 TDO2P48775 406 aa17.05■□□□□ 0.32
CBWD3-205ENST00000469687 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.05■□□□□ 0.32
CBWD3-205ENST00000469687 AOPEPQ8N6M6 819 aa17.05■□□□□ 0.32
CBWD3-205ENST00000469687 TOMM22Q9NS69 142 aa17.05■□□□□ 0.32
CBWD3-205ENST00000469687 LRP2BPQ9P2M1 347 aa17.05■□□□□ 0.32
CBWD3-205ENST00000469687 SPATA31A5Q5VU36 1347 aa17.05■□□□□ 0.32
CBWD3-205ENST00000469687 SPATA31A7Q8IWB4 1347 aa17.05■□□□□ 0.32
CBWD3-205ENST00000469687 BECN2A8MW95 431 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 RRP9O43818 475 aaKnown RBP17.04■□□□□ 0.32
CBWD3-205ENST00000469687 CDKL5O76039 1030 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 GUCY1A2P33402 732 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 IARSP41252 1262 aaKnown RBP17.04■□□□□ 0.32
CBWD3-205ENST00000469687 GYG1P46976 350 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 DPCR1Q3MIW9 517 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 ERFEQ4G0M1 354 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 MFSD6Q6ZSS7 791 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 RTL9Q8NET4 1388 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 FAM13BQ9NYF5 915 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 SLC12A7Q9Y666 1083 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 COL1A1P02452 1464 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms