RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 GJB1P08034 283 aa23.04■■□□□ 1.28
TTC28-205ENST00000469670 MIGA2Q7L4E1 593 aa23.04■■□□□ 1.28
TTC28-205ENST00000469670 UBE2Q1Q7Z7E8 422 aa23.04■■□□□ 1.28
TTC28-205ENST00000469670 SUCLG2Q96I99 432 aa23.04■■□□□ 1.28
TTC28-205ENST00000469670 MYPNQ86TC9 1320 aa23.04■■□□□ 1.28
TTC28-205ENST00000469670 RPAP1Q9BWH6 1393 aaPredicted RBP23.03■■□□□ 1.28
TTC28-205ENST00000469670 CCL5P13501 91 aa23.03■■□□□ 1.28
TTC28-205ENST00000469670 INPP5BP32019 993 aa23.03■■□□□ 1.28
TTC28-205ENST00000469670 CCDC184Q52MB2 194 aa23.03■■□□□ 1.28
TTC28-205ENST00000469670 NCBP3Q53F19 620 aaKnown RBP23.03■■□□□ 1.28
TTC28-205ENST00000469670 ADGRA2Q96PE1 1338 aa23.03■■□□□ 1.28
TTC28-205ENST00000469670 SLC4A10Q6U841 1118 aa23.02■■□□□ 1.28
TTC28-205ENST00000469670 KAZALD1Q96I82 304 aa23.02■■□□□ 1.28
TTC28-205ENST00000469670 RNF208Q9H0X6 261 aa23.02■■□□□ 1.28
TTC28-205ENST00000469670 PRO3102Q9H379 93 aa23.02■■□□□ 1.28
TTC28-205ENST00000469670 MAST3O60307 1309 aa23.02■■□□□ 1.28
TTC28-205ENST00000469670 METTL24Q5JXM2 366 aa23.01■■□□□ 1.27
TTC28-205ENST00000469670 SRCIN1Q9C0H9 1055 aa23.01■■□□□ 1.27
TTC28-205ENST00000469670 BIN2Q9UBW5 565 aaPredicted RBP23.01■■□□□ 1.27
TTC28-205ENST00000469670 KCNH4Q9UQ05 1017 aa23.01■■□□□ 1.27
TTC28-205ENST00000469670 SUGT1Q9Y2Z0 365 aa23.01■■□□□ 1.27
TTC28-205ENST00000469670 CACNA1FO60840 1977 aa23.01■■□□□ 1.27
TTC28-205ENST00000469670 RANBP2P49792 3224 aaKnown RBP23■■□□□ 1.27
TTC28-205ENST00000469670 BCAMP50895 628 aa23■■□□□ 1.27
TTC28-205ENST00000469670 UBXN2AP68543 259 aa23■■□□□ 1.27
TTC28-205ENST00000469670 LRRC24Q50LG9 513 aa23■■□□□ 1.27
TTC28-205ENST00000469670 HHIPL2Q6UWX4 724 aa23■■□□□ 1.27
TTC28-205ENST00000469670 NR2E3Q9Y5X4 410 aa23■■□□□ 1.27
TTC28-205ENST00000469670 PRKCZQ05513 592 aa22.99■■□□□ 1.27
TTC28-205ENST00000469670 WDR63Q8IWG1 891 aa22.99■■□□□ 1.27
TTC28-205ENST00000469670 ZNF112Q9UJU3 913 aa22.99■■□□□ 1.27
TTC28-205ENST00000469670 PDE8BO95263 885 aa22.98■■□□□ 1.27
TTC28-205ENST00000469670 NBPF7P0C2Y1 421 aaPredicted RBP22.98■■□□□ 1.27
TTC28-205ENST00000469670 MOGSQ13724 837 aa22.98■■□□□ 1.27
TTC28-205ENST00000469670 VGLL2Q8N8G2 317 aa22.98■■□□□ 1.27
TTC28-205ENST00000469670 U2AF1L4Q8WU68 220 aaKnown RBP22.98■■□□□ 1.27
TTC28-205ENST00000469670 FAM151AQ8WW52 585 aa22.98■■□□□ 1.27
TTC28-205ENST00000469670 ZBTB7BO15156 539 aaPredicted RBP22.97■■□□□ 1.27
TTC28-205ENST00000469670 FARP2O94887 1054 aaPredicted RBP22.97■■□□□ 1.27
TTC28-205ENST00000469670 FCGRTP55899 365 aa22.97■■□□□ 1.27
TTC28-205ENST00000469670 SLAIN1Q8ND83 568 aa22.97■■□□□ 1.27
TTC28-205ENST00000469670 PARK7Q99497 189 aaKnown RBP22.97■■□□□ 1.27
TTC28-205ENST00000469670 BICC1Q9H694 974 aaKnown RBP22.97■■□□□ 1.27
TTC28-205ENST00000469670 SALL2Q9Y467 1007 aaPredicted RBP22.97■■□□□ 1.27
TTC28-205ENST00000469670 BCRP11274 1271 aa22.96■■□□□ 1.27
TTC28-205ENST00000469670 RABL6Q3YEC7 729 aaPredicted RBP22.96■■□□□ 1.27
TTC28-205ENST00000469670 SLC17A8Q8NDX2 589 aa22.96■■□□□ 1.27
TTC28-205ENST00000469670 DLL1O00548 723 aa22.95■■□□□ 1.26
TTC28-205ENST00000469670 UTYO14607 1347 aa22.95■■□□□ 1.26
TTC28-205ENST00000469670 CYP2C8P10632 490 aa22.95■■□□□ 1.26
TTC28-205ENST00000469670 TCP10Q12799 353 aa22.95■■□□□ 1.26
TTC28-205ENST00000469670 NOL9Q5SY16 702 aaKnown RBP22.95■■□□□ 1.26
TTC28-205ENST00000469670 UNC93B1Q9H1C4 597 aa22.95■■□□□ 1.26
TTC28-205ENST00000469670 GABRQQ9UN88 632 aa22.95■■□□□ 1.26
TTC28-205ENST00000469670 SGPL1O95470 568 aa22.94■■□□□ 1.26
TTC28-205ENST00000469670 GPAT2Q6NUI2 795 aa22.94■■□□□ 1.26
TTC28-205ENST00000469670 KIF16BQ96L93 1317 aa22.93■■□□□ 1.26
TTC28-205ENST00000469670 CXCL11O14625 94 aa22.93■■□□□ 1.26
TTC28-205ENST00000469670 IFIT1P09914 478 aaKnown RBP22.93■■□□□ 1.26
TTC28-205ENST00000469670 CDC42EP5Q6NZY7 148 aa22.93■■□□□ 1.26
TTC28-205ENST00000469670 ANKRD44Q8N8A2 993 aa22.93■■□□□ 1.26
TTC28-205ENST00000469670 SPINK5Q9NQ38 1064 aaPredicted RBP22.93■■□□□ 1.26
TTC28-205ENST00000469670 A0A1W2PPC1 479 aa22.92■■□□□ 1.26
TTC28-205ENST00000469670 NFIAQ12857 509 aa22.92■■□□□ 1.26
TTC28-205ENST00000469670 PUM3Q15397 648 aaKnown RBP22.92■■□□□ 1.26
TTC28-205ENST00000469670 KLHDC4Q8TBB5 520 aa22.92■■□□□ 1.26
TTC28-205ENST00000469670 WDR66Q8TBY9 1149 aa22.92■■□□□ 1.26
TTC28-205ENST00000469670 DAGLAQ9Y4D2 1042 aa22.92■■□□□ 1.26
TTC28-205ENST00000469670 ADCY3O60266 1144 aa22.91■■□□□ 1.26
TTC28-205ENST00000469670 EVI5O60447 810 aa22.91■■□□□ 1.26
TTC28-205ENST00000469670 FGFR2P21802 821 aa22.91■■□□□ 1.26
TTC28-205ENST00000469670 DIXDC1Q155Q3 683 aa22.9■■□□□ 1.26
TTC28-205ENST00000469670 FAM198AQ9UFP1 575 aa22.9■■□□□ 1.26
TTC28-205ENST00000469670 SOX1O00570 391 aaPredicted RBP22.89■■□□□ 1.25
TTC28-205ENST00000469670 INHAP05111 366 aa22.89■■□□□ 1.25
TTC28-205ENST00000469670 ELNP15502 786 aa22.89■■□□□ 1.25
TTC28-205ENST00000469670 ZEB1P37275 1124 aaPredicted RBP22.89■■□□□ 1.25
TTC28-205ENST00000469670 FLT3LGP49771 235 aa22.89■■□□□ 1.25
TTC28-205ENST00000469670 FASTKD5Q7L8L6 764 aaKnown RBP22.89■■□□□ 1.25
TTC28-205ENST00000469670 A0A0G2JLL6 359 aaPredicted RBP22.88■■□□□ 1.25
TTC28-205ENST00000469670 TFRCP02786 760 aaKnown RBP22.88■■□□□ 1.25
TTC28-205ENST00000469670 CAPN2P17655 700 aa22.88■■□□□ 1.25
TTC28-205ENST00000469670 PRRT2Q7Z6L0 340 aaPredicted RBP22.88■■□□□ 1.25
TTC28-205ENST00000469670 PXYLP1Q8TE99 480 aa22.88■■□□□ 1.25
TTC28-205ENST00000469670 USP40Q9NVE5 1235 aa22.88■■□□□ 1.25
TTC28-205ENST00000469670 ZHX2Q9Y6X8 837 aa22.88■■□□□ 1.25
TTC28-205ENST00000469670 SLC5A1P13866 664 aa22.87■■□□□ 1.25
TTC28-205ENST00000469670 ZFPM1Q8IX07 1006 aa22.87■■□□□ 1.25
TTC28-205ENST00000469670 SCYL3Q8IZE3 742 aa22.87■■□□□ 1.25
TTC28-205ENST00000469670 LRCH3Q96II8 777 aa22.87■■□□□ 1.25
TTC28-205ENST00000469670 DEFB118Q96PH6 123 aa22.87■■□□□ 1.25
TTC28-205ENST00000469670 STAP2Q9UGK3 403 aa22.87■■□□□ 1.25
TTC28-205ENST00000469670 PHF20L1A8MW92 1017 aa22.86■■□□□ 1.25
TTC28-205ENST00000469670 TNPO2O14787 897 aaKnown RBP22.86■■□□□ 1.25
TTC28-205ENST00000469670 PRDX5P30044 214 aa22.86■■□□□ 1.25
TTC28-205ENST00000469670 IRF5Q13568 498 aa22.86■■□□□ 1.25
TTC28-205ENST00000469670 GADL1Q6ZQY3 521 aa22.86■■□□□ 1.25
TTC28-205ENST00000469670 LPIN2Q92539 896 aa22.86■■□□□ 1.25
TTC28-205ENST00000469670 PICK1Q9NRD5 415 aa22.86■■□□□ 1.25
TTC28-205ENST00000469670 PTPRAP18433 802 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms